Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898172

Identifier: 159898172

GI number: 159898172

Start: 1905573

End: 1908170

Strand: Reverse

Name: 159898172

Synonym: Haur_1648

Alternate gene names: NA

Gene position: 1908170-1905573 (Counterclockwise)

Preceding gene: 159898173

Following gene: 159898171

Centisome position: 30.07

GC content: 50.5

Gene sequence:

>2598_bases
ATGTGGCGTTATCTTGCTCTTTTTGGCATTCTTTGTTCGTTCGCCTTCAATCCACCACAGCATGCCTCGGCTCAACCAGC
AATTCAAACTCGCGCAACCATCAATGAAACCCCAAACGGTTTGCAAATCGAATGGCAAGCGGCCAAAGCAGTGCGGCCAT
TTGCCGTTTTAGTCGCCGATGCTTGGCAATTTCAGCCAACGCTCCAAGCGCTCAGTCTCGATCACCAAAACATCAATCAA
CTCGCCGATTTGCCAGCACCAATAATTGTGCTGCGCGAAGGTCGGTTTCGTGGCCAACGCTTGGTCGTACTGCAACCGCA
AACGACATTCAACCAACAAGCTATTACCCAAGCCACAGTCTCTGTTAGTAATGCTCAATTGTTGAATGATCCTCATCGCT
TGATCGATCAGCCATTTCAATTAACCCAAAGCGTGCCCAGCCCTCAATCAGGCCAAGGCTGGCGTGTTGTTGTCAATCAA
GCAGGTATGCAGCAATTAACGGGTGCAAGCTTGGAGCAAGCAGGCATTAACTTAGCCACGCTCGAACGCTATAGCCTGCA
ACTGTGGTATAAAAATCAACAATTAGCAATCGAGGAGCAAGGCACGCTCGACGGCAGCTTTGATCGCAACGATGCAATTT
GGTTTTATCAACCCAGTGTTGGCGACCGTTGGAATACAACCAGCAGTGTGTGGCTCAAAATCGGGGTCGCCCACAGCAGC
CCAAAAATTCAGCAAATCAGCATCGATCCAACTGGCTTGCCAACTAGCAACCAAGCCTACCAAACCAGCACTTGGTATGC
CCCAAAAATCTACGATTCCTTGCAGGCTGGCAACGATGGCGACCATTGGTTTAGCGCCGATTTAAAGGCTGGCCCAGATC
TCAACCCAATTACCCAGCAGATTTGGCTCACCAGCACCTTGCCACTCGCGACTGGCCCAAGCACAGTTACGCTCAGTGGA
ATTGTCTACACTAGCGCCGTCACCAGCGTAGCAATCACCAGCAGCCAACGGATCAATCTTAATTTGAATAGTGGTATTTT
TACCAAATCGGCCCAACTTGCCCCAAGCCAAAACCTGCAACTGGCAATCGCCAGCACCCAGCAAATCAGCGGAATTTCGC
TTGATCGGCTGGTTTGGCAGCGGCCTGTGCTGCTCAACGCCAACTATCAATCGTTTCAATGGCAAGCATTACGTAAAGCC
AATTATCAAATTAGCAACCAACCCAACCAAGCTGTTAGCTATAACGTGAGCAATCCATGGCAACCGCAGCGTATGCAATT
TCAAAATAATACGCTGGCCGCCAATCCAGGCGATTATCTGCTGGTCAATCCCACCAACCTTCCACAGCCCAGCATCCAAG
CCAGCGCCACCGTTAATTGGGCTACACCTGCCAAAACAATCTATCTTGCACCCAAACAATGGCATAGCCTCGTCCAGCCA
TTGATCAATCGTCGCCAGCAGCAGGGTTGGCAGCCTTTGTTGGTCGATGTTCAGGCGATTTATGATCGTTGGAGCAGCGG
CAATGTTGATCCGTTGGCGATTCGCGATTTTATGCGCTACCTCGCCAGTACTTGGCCGCAAGCACCTCAATCGTTGGTTT
TAGTTGGCGATGGCACGATCGATCCGCTGAATTATCTAGGCCGCAACAACCCCAATATGATTCCACCATTGCCTGCTTAC
ACCGACCCATGGCTTGGTGAAATCGCCTGCGACACATGTTTTGTCCAACTTGATGGTGCAAATCCCTTGGACGACCCAAT
GCCCGACCTGCAAATTGGCCGCTTACCCGCCAAAACCAGCACCGAAGTCAGCAATTTAATCAACAAAATCAACGCTTACG
AAAACGCTCCAGCCGATCTGCGCTGGCGTTCGCGCCAAGTCTATATTGCTGATAATTACAAAACAGCCAATGGTCAGGCC
GATTATGCAGGCGATTTTGCCGCATTGAGCGATATCATGCTTAGTTATCAACCAAGTCAGCTCGATATTCAGCGCATCTA
TTACGACCCTTGGCGCAAAACCAACAACGGCCTGCCGCAAACTGATCCTTGGCGCATCACCAGCGCCGACCAAGCCCGTC
AAAAAACCTTTGAGCAACTTAATCAAGGGGCGGCAGTAGTGACCTACGTTGGCCATAGTCATCAATATCAATGGGCAATT
ACCGATTTGAGCAATAACCAGCCCTATCTGTTGAGTTTGTACGATAGCGACCGCTTGCAAAATAGCCCAGCCCTGCCGAT
GATCTTGGAGATGACTTGTTTGACTAGCGCCTTTCAGACCCCCGCATGGAGTGGTACGAGCCTTGATGAACGTTTGGTGC
TACAACCGCAGGGTGGCGCAATTGCCACCTGGGGTTCAGCGGGCTTAGGCGTGGCCCATGGTCATGATCTGCTCAACGCA
GGCTGGTGGCAACGCATGTGGAGCAATCCTAGCCAAACACCGATTGGTACAGGAGTACTAGCAGGCTTATTGCACTTGTT
CAGCGATGGTGGCTGTTGCCAAGATAGCCTGCAAAGCTCGATTCTTTTGGGCGATCCCAACATCTTATTACAACACCAAG
AGCGCCAAGCTATCTACCTACCAGCAATTATTAAATAA

Upstream 100 bases:

>100_bases
TCGAATCTTCGCACCAATGACCACTCGGTAATCGCGTCGGTAAGGGCTGGCTGGCATCATGCTAGTCAGCCCTTGATTTT
TACACTGAGGATTGTGGCAT

Downstream 100 bases:

>100_bases
TCACATAGCTAAAGAACTAGTGTTATCTAGGACTAATGGGCTACTCTCTTAAACTCCCCTCTTACATCCAACACGACTAA
AGAGTAGCTCATATATGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 865; Mature: 865

Protein sequence:

>865_residues
MWRYLALFGILCSFAFNPPQHASAQPAIQTRATINETPNGLQIEWQAAKAVRPFAVLVADAWQFQPTLQALSLDHQNINQ
LADLPAPIIVLREGRFRGQRLVVLQPQTTFNQQAITQATVSVSNAQLLNDPHRLIDQPFQLTQSVPSPQSGQGWRVVVNQ
AGMQQLTGASLEQAGINLATLERYSLQLWYKNQQLAIEEQGTLDGSFDRNDAIWFYQPSVGDRWNTTSSVWLKIGVAHSS
PKIQQISIDPTGLPTSNQAYQTSTWYAPKIYDSLQAGNDGDHWFSADLKAGPDLNPITQQIWLTSTLPLATGPSTVTLSG
IVYTSAVTSVAITSSQRINLNLNSGIFTKSAQLAPSQNLQLAIASTQQISGISLDRLVWQRPVLLNANYQSFQWQALRKA
NYQISNQPNQAVSYNVSNPWQPQRMQFQNNTLAANPGDYLLVNPTNLPQPSIQASATVNWATPAKTIYLAPKQWHSLVQP
LINRRQQQGWQPLLVDVQAIYDRWSSGNVDPLAIRDFMRYLASTWPQAPQSLVLVGDGTIDPLNYLGRNNPNMIPPLPAY
TDPWLGEIACDTCFVQLDGANPLDDPMPDLQIGRLPAKTSTEVSNLINKINAYENAPADLRWRSRQVYIADNYKTANGQA
DYAGDFAALSDIMLSYQPSQLDIQRIYYDPWRKTNNGLPQTDPWRITSADQARQKTFEQLNQGAAVVTYVGHSHQYQWAI
TDLSNNQPYLLSLYDSDRLQNSPALPMILEMTCLTSAFQTPAWSGTSLDERLVLQPQGGAIATWGSAGLGVAHGHDLLNA
GWWQRMWSNPSQTPIGTGVLAGLLHLFSDGGCCQDSLQSSILLGDPNILLQHQERQAIYLPAIIK

Sequences:

>Translated_865_residues
MWRYLALFGILCSFAFNPPQHASAQPAIQTRATINETPNGLQIEWQAAKAVRPFAVLVADAWQFQPTLQALSLDHQNINQ
LADLPAPIIVLREGRFRGQRLVVLQPQTTFNQQAITQATVSVSNAQLLNDPHRLIDQPFQLTQSVPSPQSGQGWRVVVNQ
AGMQQLTGASLEQAGINLATLERYSLQLWYKNQQLAIEEQGTLDGSFDRNDAIWFYQPSVGDRWNTTSSVWLKIGVAHSS
PKIQQISIDPTGLPTSNQAYQTSTWYAPKIYDSLQAGNDGDHWFSADLKAGPDLNPITQQIWLTSTLPLATGPSTVTLSG
IVYTSAVTSVAITSSQRINLNLNSGIFTKSAQLAPSQNLQLAIASTQQISGISLDRLVWQRPVLLNANYQSFQWQALRKA
NYQISNQPNQAVSYNVSNPWQPQRMQFQNNTLAANPGDYLLVNPTNLPQPSIQASATVNWATPAKTIYLAPKQWHSLVQP
LINRRQQQGWQPLLVDVQAIYDRWSSGNVDPLAIRDFMRYLASTWPQAPQSLVLVGDGTIDPLNYLGRNNPNMIPPLPAY
TDPWLGEIACDTCFVQLDGANPLDDPMPDLQIGRLPAKTSTEVSNLINKINAYENAPADLRWRSRQVYIADNYKTANGQA
DYAGDFAALSDIMLSYQPSQLDIQRIYYDPWRKTNNGLPQTDPWRITSADQARQKTFEQLNQGAAVVTYVGHSHQYQWAI
TDLSNNQPYLLSLYDSDRLQNSPALPMILEMTCLTSAFQTPAWSGTSLDERLVLQPQGGAIATWGSAGLGVAHGHDLLNA
GWWQRMWSNPSQTPIGTGVLAGLLHLFSDGGCCQDSLQSSILLGDPNILLQHQERQAIYLPAIIK
>Mature_865_residues
MWRYLALFGILCSFAFNPPQHASAQPAIQTRATINETPNGLQIEWQAAKAVRPFAVLVADAWQFQPTLQALSLDHQNINQ
LADLPAPIIVLREGRFRGQRLVVLQPQTTFNQQAITQATVSVSNAQLLNDPHRLIDQPFQLTQSVPSPQSGQGWRVVVNQ
AGMQQLTGASLEQAGINLATLERYSLQLWYKNQQLAIEEQGTLDGSFDRNDAIWFYQPSVGDRWNTTSSVWLKIGVAHSS
PKIQQISIDPTGLPTSNQAYQTSTWYAPKIYDSLQAGNDGDHWFSADLKAGPDLNPITQQIWLTSTLPLATGPSTVTLSG
IVYTSAVTSVAITSSQRINLNLNSGIFTKSAQLAPSQNLQLAIASTQQISGISLDRLVWQRPVLLNANYQSFQWQALRKA
NYQISNQPNQAVSYNVSNPWQPQRMQFQNNTLAANPGDYLLVNPTNLPQPSIQASATVNWATPAKTIYLAPKQWHSLVQP
LINRRQQQGWQPLLVDVQAIYDRWSSGNVDPLAIRDFMRYLASTWPQAPQSLVLVGDGTIDPLNYLGRNNPNMIPPLPAY
TDPWLGEIACDTCFVQLDGANPLDDPMPDLQIGRLPAKTSTEVSNLINKINAYENAPADLRWRSRQVYIADNYKTANGQA
DYAGDFAALSDIMLSYQPSQLDIQRIYYDPWRKTNNGLPQTDPWRITSADQARQKTFEQLNQGAAVVTYVGHSHQYQWAI
TDLSNNQPYLLSLYDSDRLQNSPALPMILEMTCLTSAFQTPAWSGTSLDERLVLQPQGGAIATWGSAGLGVAHGHDLLNA
GWWQRMWSNPSQTPIGTGVLAGLLHLFSDGGCCQDSLQSSILLGDPNILLQHQERQAIYLPAIIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95935; Mature: 95935

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRYLALFGILCSFAFNPPQHASAQPAIQTRATINETPNGLQIEWQAAKAVRPFAVLVAD
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCEECCCCCCCEEEEEECCCCCCCEEEEEEC
AWQFQPTLQALSLDHQNINQLADLPAPIIVLREGRFRGQRLVVLQPQTTFNQQAITQATV
CCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHE
SVSNAQLLNDPHRLIDQPFQLTQSVPSPQSGQGWRVVVNQAGMQQLTGASLEQAGINLAT
EECCHHHHCCCHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCHHHHCCCCHHHCCCCEEE
LERYSLQLWYKNQQLAIEEQGTLDGSFDRNDAIWFYQPSVGDRWNTTSSVWLKIGVAHSS
EEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCC
PKIQQISIDPTGLPTSNQAYQTSTWYAPKIYDSLQAGNDGDHWFSADLKAGPDLNPITQQ
CCEEEEEECCCCCCCCCCCEECCCEECHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHH
IWLTSTLPLATGPSTVTLSGIVYTSAVTSVAITSSQRINLNLNSGIFTKSAQLAPSQNLQ
EEEEECCCCCCCCCEEEEEEEEEHHHHHEEEEECCCEEEEEECCCEEECCCCCCCCCCCE
LAIASTQQISGISLDRLVWQRPVLLNANYQSFQWQALRKANYQISNQPNQAVSYNVSNPW
EEEECCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHCCCEECCCCCCEEEECCCCCC
QPQRMQFQNNTLAANPGDYLLVNPTNLPQPSIQASATVNWATPAKTIYLAPKQWHSLVQP
CCHHHEECCCEEECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHH
LINRRQQQGWQPLLVDVQAIYDRWSSGNVDPLAIRDFMRYLASTWPQAPQSLVLVGDGTI
HHHHHHHCCCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
DPLNYLGRNNPNMIPPLPAYTDPWLGEIACDTCFVQLDGANPLDDPMPDLQIGRLPAKTS
CHHHHHCCCCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCH
TEVSNLINKINAYENAPADLRWRSRQVYIADNYKTANGQADYAGDFAALSDIMLSYQPSQ
HHHHHHHHHHHHHCCCCCCCEECCEEEEEEECEEECCCCCCCCCCHHHHHHHHHHCCCCC
LDIQRIYYDPWRKTNNGLPQTDPWRITSADQARQKTFEQLNQGAAVVTYVGHSHQYQWAI
EEEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEE
TDLSNNQPYLLSLYDSDRLQNSPALPMILEMTCLTSAFQTPAWSGTSLDERLVLQPQGGA
EECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCE
IATWGSAGLGVAHGHDLLNAGWWQRMWSNPSQTPIGTGVLAGLLHLFSDGGCCQDSLQSS
EEECCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCE
ILLGDPNILLQHQERQAIYLPAIIK
EEECCCCEEEEECCCCEEECCEECC
>Mature Secondary Structure
MWRYLALFGILCSFAFNPPQHASAQPAIQTRATINETPNGLQIEWQAAKAVRPFAVLVAD
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCEECCCCCCCEEEEEECCCCCCCEEEEEEC
AWQFQPTLQALSLDHQNINQLADLPAPIIVLREGRFRGQRLVVLQPQTTFNQQAITQATV
CCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHE
SVSNAQLLNDPHRLIDQPFQLTQSVPSPQSGQGWRVVVNQAGMQQLTGASLEQAGINLAT
EECCHHHHCCCHHHHCCHHHHHHCCCCCCCCCCCEEEEECCCHHHHCCCCHHHCCCCEEE
LERYSLQLWYKNQQLAIEEQGTLDGSFDRNDAIWFYQPSVGDRWNTTSSVWLKIGVAHSS
EEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCC
PKIQQISIDPTGLPTSNQAYQTSTWYAPKIYDSLQAGNDGDHWFSADLKAGPDLNPITQQ
CCEEEEEECCCCCCCCCCCEECCCEECHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHH
IWLTSTLPLATGPSTVTLSGIVYTSAVTSVAITSSQRINLNLNSGIFTKSAQLAPSQNLQ
EEEEECCCCCCCCCEEEEEEEEEHHHHHEEEEECCCEEEEEECCCEEECCCCCCCCCCCE
LAIASTQQISGISLDRLVWQRPVLLNANYQSFQWQALRKANYQISNQPNQAVSYNVSNPW
EEEECCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHCCCEECCCCCCEEEECCCCCC
QPQRMQFQNNTLAANPGDYLLVNPTNLPQPSIQASATVNWATPAKTIYLAPKQWHSLVQP
CCHHHEECCCEEECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHH
LINRRQQQGWQPLLVDVQAIYDRWSSGNVDPLAIRDFMRYLASTWPQAPQSLVLVGDGTI
HHHHHHHCCCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
DPLNYLGRNNPNMIPPLPAYTDPWLGEIACDTCFVQLDGANPLDDPMPDLQIGRLPAKTS
CHHHHHCCCCCCCCCCCCCCCCCCCHHEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCH
TEVSNLINKINAYENAPADLRWRSRQVYIADNYKTANGQADYAGDFAALSDIMLSYQPSQ
HHHHHHHHHHHHHCCCCCCCEECCEEEEEEECEEECCCCCCCCCCHHHHHHHHHHCCCCC
LDIQRIYYDPWRKTNNGLPQTDPWRITSADQARQKTFEQLNQGAAVVTYVGHSHQYQWAI
EEEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEE
TDLSNNQPYLLSLYDSDRLQNSPALPMILEMTCLTSAFQTPAWSGTSLDERLVLQPQGGA
EECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCE
IATWGSAGLGVAHGHDLLNAGWWQRMWSNPSQTPIGTGVLAGLLHLFSDGGCCQDSLQSS
EEECCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCE
ILLGDPNILLQHQERQAIYLPAIIK
EEECCCCEEEEECCCCEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA