| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is baeB [H]
Identifier: 159898167
GI number: 159898167
Start: 1900091
End: 1901485
Strand: Reverse
Name: baeB [H]
Synonym: Haur_1643
Alternate gene names: 159898167
Gene position: 1901485-1900091 (Counterclockwise)
Preceding gene: 159898171
Following gene: 159898166
Centisome position: 29.96
GC content: 52.62
Gene sequence:
>1395_bases ATGTTTTTCCAACGGTTGTATCACGATGGTTTAGCCCAAGCAAGTTATTTAGTCGGTTGCCAAAAAACTGGCGAAGCTTT GGTCATTGATCCCCATCGTGATAGTGCAGTGTATTTGAATGCAGCGCAAGCGGCTGGTTTGCGGATTAGCGCAATCACCG AAACCCATATTCACGCCGATTTTGTCTCGGGCAGCCGCGAGCTGGCGCAAATTACGGGCGCAAAACTGTATCTTTCGGCA GCAGGCACAGCAGCTTGGCAATATGCTTTTGCCAGCAGCAACCCCAATGTGCAGTTGATCAACGATGGCGATAGCTGGAT GGTTGGCAATTTGAAGATCGAGGTCTTGCATACCCCAGGCCATACGCCAGAACATGTGATTTTTATGCTCACCGACACGC CTGCTGGCGATGAACCAATGGGTATTTTCACAGGCGATTTGTTGTTTGCTGGCGATGTTGGCCGCCCTGACTTGCTCGAA AAAGCCGCTGGGATTCAAGGCACCAGCGAGGCCGGAGCCAAAGATTTGTTTAAATCGTTGCAGCGCATCGCTTCCTTGCC CGATTTCTTGCAAGTTTGGCCAGGCCATGGTTCGGGCAGCGCTTGTGGCAAAGCACTGGGAGCTGTGCCGCAAAGTACCT TGGGCTACGAAAAGAAAGTTAATTGGGCCTTCAAACAGCAGAACGAGGCTGATTTTGTGGCCGCAGTGCTCGATGGTCAG CCAACGCCACCGCCCTATTTCGCCGCGATGAAGCGCATCAACCGCGATGGTCCTGAGTTGCGCCCGCAACGTTTGCCAGC CCTCAGCCTTGCCGAAATTAAGCTTGATAATCGGTTGGTTGTTGATTTACGTTCGGCCAATGATTTTGCTCAAGCCAGCA TTCCAGGCGCACTCAGCCTGACCAGCGGCGCGATGCTCAATCGCTGGGCCGGTTGGTTTGTGCCGGTCGCAAGCAAGGTT GTGTTAATTGGCACTGCCGAAGCGGCCAAAACTGCCCAAACCGAGCTAAGCATGATCGGCATCGACCAAATCGAAGGCTA TATCACGCCCGATATGCTAACCGAATGGCTCAAAACCAACCCAAGCCAAAGCTATCAACGGGTGCCAGCCGCCAATTTGA GCGAACAACTTGACCAGGCGTTTGTGCTCGATGTGCGCACGCCCGAAGAATATGCCAACGGTCACGGAGCTAAGGCGGTC AATATTCCATTGAATGAATTACCCAAGCGCCTGGCCGAAATTCCCAATGATCAACCGTTGATCGTGCATTGTCAGGCGGG TGGGCGTTCGCCAATTGCCATGAGTTTGCTCAAACCACATTTCAGCCAAGCCATGGTTGAGATGAGCGACGGCTGGAATG GTTGGTATCAATTGAAAAAGGAGCGTCACGTATGA
Upstream 100 bases:
>100_bases TGGCTTTTGCATCGCAATTCCTTAACTGCAAACCAATCCATGTAACCATTGTACAAGCAAACGCATCAAGAATATGTAAC AGCAAAATGGAGGGTTGTCT
Downstream 100 bases:
>100_bases TCAACGAATTAAGTGTGCAAGAACTACAAGTGTGGGCCAACCAACAAACGATCTTTTTGATCGATGTGCGTGAGCCAGCT GAATATGCCACGGGCCATAT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MFFQRLYHDGLAQASYLVGCQKTGEALVIDPHRDSAVYLNAAQAAGLRISAITETHIHADFVSGSRELAQITGAKLYLSA AGTAAWQYAFASSNPNVQLINDGDSWMVGNLKIEVLHTPGHTPEHVIFMLTDTPAGDEPMGIFTGDLLFAGDVGRPDLLE KAAGIQGTSEAGAKDLFKSLQRIASLPDFLQVWPGHGSGSACGKALGAVPQSTLGYEKKVNWAFKQQNEADFVAAVLDGQ PTPPPYFAAMKRINRDGPELRPQRLPALSLAEIKLDNRLVVDLRSANDFAQASIPGALSLTSGAMLNRWAGWFVPVASKV VLIGTAEAAKTAQTELSMIGIDQIEGYITPDMLTEWLKTNPSQSYQRVPAANLSEQLDQAFVLDVRTPEEYANGHGAKAV NIPLNELPKRLAEIPNDQPLIVHCQAGGRSPIAMSLLKPHFSQAMVEMSDGWNGWYQLKKERHV
Sequences:
>Translated_464_residues MFFQRLYHDGLAQASYLVGCQKTGEALVIDPHRDSAVYLNAAQAAGLRISAITETHIHADFVSGSRELAQITGAKLYLSA AGTAAWQYAFASSNPNVQLINDGDSWMVGNLKIEVLHTPGHTPEHVIFMLTDTPAGDEPMGIFTGDLLFAGDVGRPDLLE KAAGIQGTSEAGAKDLFKSLQRIASLPDFLQVWPGHGSGSACGKALGAVPQSTLGYEKKVNWAFKQQNEADFVAAVLDGQ PTPPPYFAAMKRINRDGPELRPQRLPALSLAEIKLDNRLVVDLRSANDFAQASIPGALSLTSGAMLNRWAGWFVPVASKV VLIGTAEAAKTAQTELSMIGIDQIEGYITPDMLTEWLKTNPSQSYQRVPAANLSEQLDQAFVLDVRTPEEYANGHGAKAV NIPLNELPKRLAEIPNDQPLIVHCQAGGRSPIAMSLLKPHFSQAMVEMSDGWNGWYQLKKERHV >Mature_464_residues MFFQRLYHDGLAQASYLVGCQKTGEALVIDPHRDSAVYLNAAQAAGLRISAITETHIHADFVSGSRELAQITGAKLYLSA AGTAAWQYAFASSNPNVQLINDGDSWMVGNLKIEVLHTPGHTPEHVIFMLTDTPAGDEPMGIFTGDLLFAGDVGRPDLLE KAAGIQGTSEAGAKDLFKSLQRIASLPDFLQVWPGHGSGSACGKALGAVPQSTLGYEKKVNWAFKQQNEADFVAAVLDGQ PTPPPYFAAMKRINRDGPELRPQRLPALSLAEIKLDNRLVVDLRSANDFAQASIPGALSLTSGAMLNRWAGWFVPVASKV VLIGTAEAAKTAQTELSMIGIDQIEGYITPDMLTEWLKTNPSQSYQRVPAANLSEQLDQAFVLDVRTPEEYANGHGAKAV NIPLNELPKRLAEIPNDQPLIVHCQAGGRSPIAMSLLKPHFSQAMVEMSDGWNGWYQLKKERHV
Specific function: Probably involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily [H]
Homologues:
Organism=Homo sapiens, GI116642887, Length=216, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI21703352, Length=216, Percent_Identity=29.1666666666667, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI94538320, Length=182, Percent_Identity=29.6703296703297, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI94538322, Length=182, Percent_Identity=29.6703296703297, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI41327741, Length=184, Percent_Identity=29.3478260869565, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI1787158, Length=223, Percent_Identity=28.6995515695067, Blast_Score=86, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538952, Length=224, Percent_Identity=27.2321428571429, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI221330176, Length=202, Percent_Identity=27.2277227722772, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI21356335, Length=182, Percent_Identity=29.1208791208791, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24667711, Length=182, Percent_Identity=29.1208791208791, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI24667703, Length=182, Percent_Identity=29.1208791208791, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 50245; Mature: 50245
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFQRLYHDGLAQASYLVGCQKTGEALVIDPHRDSAVYLNAAQAAGLRISAITETHIHAD CCHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCEEEEEEHHHCCEEEEEEEECCEEEH FVSGSRELAQITGAKLYLSAAGTAAWQYAFASSNPNVQLINDGDSWMVGNLKIEVLHTPG HHCCCHHHHHHCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEEEEEEEECCC HTPEHVIFMLTDTPAGDEPMGIFTGDLLFAGDVGRPDLLEKAAGIQGTSEAGAKDLFKSL CCCCEEEEEEECCCCCCCCCEEEECCEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHH QRIASLPDFLQVWPGHGSGSACGKALGAVPQSTLGYEKKVNWAFKQQNEADFVAAVLDGQ HHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCEEEEEECCC PTPPPYFAAMKRINRDGPELRPQRLPALSLAEIKLDNRLVVDLRSANDFAQASIPGALSL CCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEECCEEEEEEECCCCHHHHCCCCCEEE TSGAMLNRWAGWFVPVASKVVLIGTAEAAKTAQTELSMIGIDQIEGYITPDMLTEWLKTN CCCHHHHHHCCHHEECCCCEEEEECCHHHHHHHHHHHEEEHHHHCCEECHHHHHHHHHCC PSQSYQRVPAANLSEQLDQAFVLDVRTPEEYANGHGAKAVNIPLNELPKRLAEIPNDQPL CCHHHHHCCCCCHHHHCCCEEEEEECCCHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCE IVHCQAGGRSPIAMSLLKPHFSQAMVEMSDGWNGWYQLKKERHV EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC >Mature Secondary Structure MFFQRLYHDGLAQASYLVGCQKTGEALVIDPHRDSAVYLNAAQAAGLRISAITETHIHAD CCHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCEEEEEEHHHCCEEEEEEEECCEEEH FVSGSRELAQITGAKLYLSAAGTAAWQYAFASSNPNVQLINDGDSWMVGNLKIEVLHTPG HHCCCHHHHHHCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEEEEEEEECCC HTPEHVIFMLTDTPAGDEPMGIFTGDLLFAGDVGRPDLLEKAAGIQGTSEAGAKDLFKSL CCCCEEEEEEECCCCCCCCCEEEECCEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHH QRIASLPDFLQVWPGHGSGSACGKALGAVPQSTLGYEKKVNWAFKQQNEADFVAAVLDGQ HHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCEEEEEECCC PTPPPYFAAMKRINRDGPELRPQRLPALSLAEIKLDNRLVVDLRSANDFAQASIPGALSL CCCCHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEECCEEEEEEECCCCHHHHCCCCCEEE TSGAMLNRWAGWFVPVASKVVLIGTAEAAKTAQTELSMIGIDQIEGYITPDMLTEWLKTN CCCHHHHHHCCHHEECCCCEEEEECCHHHHHHHHHHHEEEHHHHCCEECHHHHHHHHHCC PSQSYQRVPAANLSEQLDQAFVLDVRTPEEYANGHGAKAVNIPLNELPKRLAEIPNDQPL CCHHHHHCCCCCHHHHCCCEEEEEECCCHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCE IVHCQAGGRSPIAMSLLKPHFSQAMVEMSDGWNGWYQLKKERHV EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA