| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898057
Identifier: 159898057
GI number: 159898057
Start: 1786001
End: 1786636
Strand: Reverse
Name: 159898057
Synonym: Haur_1532
Alternate gene names: NA
Gene position: 1786636-1786001 (Counterclockwise)
Preceding gene: 159898058
Following gene: 159898047
Centisome position: 28.15
GC content: 49.53
Gene sequence:
>636_bases ATGAACACGCCACTTCCGACCGCATCTCACGAGATTATGCGTCAACGTCTTGTTGAGTATGCCCATGCTGTTGCGCTCGG TGCGCCACTTGATGCCGCGCTCCAAGTCGTCGCCGACCATGTTGAAACATGCGCAAGCTGTCGCGCCGAGTTGTTTGATG CCTTGGATGCGAGTTATGCGTTGTACAGCAATTCGCTCTCGCTGGTTGATAACATTCCTGCGCCGTCATTGAAGTTCTTG CGCCAGCATTCGTTGATAACTAGCGCTGCGCCCGAAACCGTGGGCTACCGTTTTATGATTGAGTTCTCCGACGAAATGCT CAAACATATGCAAATTCAATTGCAATATACGGGCCAAATGCGCGGTCAACGTTTGATCGGCACCTATCGCCAATCATCGG TGAGCATTCCCGATGTGACGATTGAAATGTATGAGAGTATGCAACCCAAACATGCGGTTTTGCACTGCTACATTCAAGTG CCCGAGCGCGATCCCTTTGATCAAGCTGGAACCCAAGTGATGGTGGTTTCGCCAACCTATGAAAATAACGGCACAACCGA TGCCGATGGGTTTGTCTTGTTTGATCGAATCCCGATTGAAGAATTGGCTCGTTTGAAGATCAAAATTCTCAATTAG
Upstream 100 bases:
>100_bases CAGCCGAGCAATCAAGCGGTTGCGTGACGATCCACGCTGGCAAGCTGTTGCCACTGATCTAGGGATTGCTTACGAATAAC TATTTTGGTGAGGAACTACC
Downstream 100 bases:
>100_bases CACGCGTGGGTAGTACGGGTTGTGTTGTGTTCTACCCACGGCTACTAAGCGAGCAAAAGCTAAACCAAAGAGAGAATCAT TGCTACGATTCCCCAACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYALYSNSLSLVDNIPAPSLKFL RQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQMRGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQV PERDPFDQAGTQVMVVSPTYENNGTTDADGFVLFDRIPIEELARLKIKILN
Sequences:
>Translated_211_residues MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYALYSNSLSLVDNIPAPSLKFL RQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQMRGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQV PERDPFDQAGTQVMVVSPTYENNGTTDADGFVLFDRIPIEELARLKIKILN >Mature_211_residues MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYALYSNSLSLVDNIPAPSLKFL RQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQMRGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQV PERDPFDQAGTQVMVVSPTYENNGTTDADGFVLFDRIPIEELARLKIKILN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23633; Mature: 23633
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYSNSLSLVDNIPAPSLKFLRQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQM HHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHEEEEEECCCC RGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQVPERDPFDQAGTQVMVVSPTY CCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHCCEEEEEECCC ENNGTTDADGFVLFDRIPIEELARLKIKILN CCCCCCCCCCEEEEECCCHHHHHHEEEEECC >Mature Secondary Structure MNTPLPTASHEIMRQRLVEYAHAVALGAPLDAALQVVADHVETCASCRAELFDALDASYA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYSNSLSLVDNIPAPSLKFLRQHSLITSAAPETVGYRFMIEFSDEMLKHMQIQLQYTGQM HHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHEEEEEECCCC RGQRLIGTYRQSSVSIPDVTIEMYESMQPKHAVLHCYIQVPERDPFDQAGTQVMVVSPTY CCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHCCEEEEEECCC ENNGTTDADGFVLFDRIPIEELARLKIKILN CCCCCCCCCCEEEEECCCHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA