Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898000

Identifier: 159898000

GI number: 159898000

Start: 1723799

End: 1724032

Strand: Reverse

Name: 159898000

Synonym: Haur_1475

Alternate gene names: NA

Gene position: 1724032-1723799 (Counterclockwise)

Preceding gene: 159898001

Following gene: 159897997

Centisome position: 27.16

GC content: 50.43

Gene sequence:

>234_bases
ATGATTGGAACAGAACCGCTTTACATTGAACAGTTGAAGGTTGAAGCCGAACGCTTGCAACGCCGTTTTGAGCAAGCAAC
CGATGTTGATGAATTTATTCGCGTTAGCCAAGAAGCTAGCCGCCGAATTGCTGTGCTTGCCCCGATTGCCAGCATTATTC
AGCGCTATATGCTCATTTCCGAGTTGGCCCACCGCGAGTACGAAGCTCACAAGCCCCAACCTAGCGAAGCGTAG

Upstream 100 bases:

>100_bases
ACACCAGTTTCTGATCCACTACTCGCCGATCTTTCGCGGATCATCTATACTGCACGCCATCCACAAATTCGCTAGTCGTC
GTTTGGAAAGGGCTACTGGG

Downstream 100 bases:

>100_bases
CTGGGGCATAGTGTTGCAATAATACGGGCTGTGGAGCTTCTTCAACTAATTGTAGAAACAGTGGCACTAAGGCTGGGTCA
AAATGGCTGCCCGCCAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MIGTEPLYIEQLKVEAERLQRRFEQATDVDEFIRVSQEASRRIAVLAPIASIIQRYMLISELAHREYEAHKPQPSEA

Sequences:

>Translated_77_residues
MIGTEPLYIEQLKVEAERLQRRFEQATDVDEFIRVSQEASRRIAVLAPIASIIQRYMLISELAHREYEAHKPQPSEA
>Mature_77_residues
MIGTEPLYIEQLKVEAERLQRRFEQATDVDEFIRVSQEASRRIAVLAPIASIIQRYMLISELAHREYEAHKPQPSEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8967; Mature: 8967

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTEPLYIEQLKVEAERLQRRFEQATDVDEFIRVSQEASRRIAVLAPIASIIQRYMLIS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAHREYEAHKPQPSEA
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIGTEPLYIEQLKVEAERLQRRFEQATDVDEFIRVSQEASRRIAVLAPIASIIQRYMLIS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAHREYEAHKPQPSEA
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA