| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898001
Identifier: 159898001
GI number: 159898001
Start: 1724058
End: 1725548
Strand: Reverse
Name: 159898001
Synonym: Haur_1476
Alternate gene names: NA
Gene position: 1725548-1724058 (Counterclockwise)
Preceding gene: 159898004
Following gene: 159898000
Centisome position: 27.19
GC content: 49.03
Gene sequence:
>1491_bases ATGAAAAAAGCTTTTTTGCTCTTTTGGGTGATGATGCTGGCAGTTCTTGCCTGTGGAATAGCGATTTACTATCTCCCAGC AAGCGCGGCAGTCACTCCCTCCAATTCATATCTTGAACGCACTGCTGCTGTTACTTCCGAGGCTGATGTTCCACCGTTGG TTTCCTCGATGCCACCAAGCGTATGGTTTTTTCCTGAACGCGCCAAAATTGGTAGTGTTGAAATTGGCGGTATGAGCGAG GATGAAGCCTTAGCCGCCTTGCAAGCAGCCTATCCCAACCCCACCTTGACTTTGACCAACCCAGTTTTGCTTGAGCCAAT CAAACTCGATGGTCAACAACTTGGCTATCAGCTCGATTTTGCCCAAGCCTTACGCGATGCTCACGACCTAGCTGAAAAGC AAATTCCAATTCGCTTAGCAGTCAATGCCTCGTTCGATCAGCAATTGCTCAATCAGACGCTTGGCGAAATTGAGCAGGCG CTAGCTATCTCGCCCACGGTTGGCTATGATCGGGTGGTCTATGCCTTTGTGCTGACTCCTGGCTTGACGCTTGATCGAAC AGCCTTGGTAGCCGAAATTACCCAAACCTTGCAACTGAGTCAAACTGATCCACTGTTGATTCCAACGAGTCCAGTCACGG CGAATTTGCAAGCGAGCACCGAACAACTAACGGCAGCCTTGGCCGATCGCGAGGCTGAGTGGGATGGCGTGGTTGGCATC TCAGTTTACGATATGGAAACCAAGCAATGGTTCGATTATCAAGCCAATACGGTTTTTTCGGGCATGAGCGTGCTGAAAAT TCCAATTTTGCTGCAATCATTTCTTAGTCGCGAAAGCTTCACCAAAAATCAATATGCCATGATCGATCTGATGATTGGTG ATAGCGATAACGAAGCTTCCAACGATCTGCTAGCCATGATCGGCGATGGCGATAGCTTAGAAGGCGCATACATCCTTGAT CAAACATTAACTGATATTCTAGGCCTAGAATATACAACCTTGGCCGCCCCATTTGAGTCGATCGATTATCTTTCAAATGT CCAGGGCGTAGAAATTCCCCAACGAGGTCAAGAGGGTGCTCGGCCCTACACCGACGCAGATCCCTATGTCCGTTCATCGC CACGCGAGATGGCCCAAGTCGTTTTGGCGATTGTCGAGTGTAGCCAAGGCCAAGGGGTTTTGCTAGCAATCAAAGATAGT TTGCTCAGCCCTGAACGCTGCGCTGAAATGTTGGAGATCTTAAGTCGGAATAAAGATACCAACAAAATTGTGGCGGGTGT CGCTGAAGGTAGTTTTGTGGCCCATAAAAGCGGCTGGATCGATGATGCTCGTGCCGATGCAGGCTATGTGCGCGATCCCA ACGGTGATGAATATATTGTGGCCATGTGGATTTGGCAAGACACCGACTATATTGATACACCAGTTTCTGATCCACTACTC GCCGATCTTTCGCGGATCATCTATACTGCACGCCATCCACAAATTCGCTAG
Upstream 100 bases:
>100_bases CTCGCTATCCGCGAAACCTGAACCTGCGGTATACTTAGTGGGTTCTCTGTGTGCTGGTTAGCCGAATCGTTCAAATCATA TTATCAAGCTACATGCATCA
Downstream 100 bases:
>100_bases TCGTCGTTTGGAAAGGGCTACTGGGATGATTGGAACAGAACCGCTTTACATTGAACAGTTGAAGGTTGAAGCCGAACGCT TGCAACGCCGTTTTGAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MKKAFLLFWVMMLAVLACGIAIYYLPASAAVTPSNSYLERTAAVTSEADVPPLVSSMPPSVWFFPERAKIGSVEIGGMSE DEALAALQAAYPNPTLTLTNPVLLEPIKLDGQQLGYQLDFAQALRDAHDLAEKQIPIRLAVNASFDQQLLNQTLGEIEQA LAISPTVGYDRVVYAFVLTPGLTLDRTALVAEITQTLQLSQTDPLLIPTSPVTANLQASTEQLTAALADREAEWDGVVGI SVYDMETKQWFDYQANTVFSGMSVLKIPILLQSFLSRESFTKNQYAMIDLMIGDSDNEASNDLLAMIGDGDSLEGAYILD QTLTDILGLEYTTLAAPFESIDYLSNVQGVEIPQRGQEGARPYTDADPYVRSSPREMAQVVLAIVECSQGQGVLLAIKDS LLSPERCAEMLEILSRNKDTNKIVAGVAEGSFVAHKSGWIDDARADAGYVRDPNGDEYIVAMWIWQDTDYIDTPVSDPLL ADLSRIIYTARHPQIR
Sequences:
>Translated_496_residues MKKAFLLFWVMMLAVLACGIAIYYLPASAAVTPSNSYLERTAAVTSEADVPPLVSSMPPSVWFFPERAKIGSVEIGGMSE DEALAALQAAYPNPTLTLTNPVLLEPIKLDGQQLGYQLDFAQALRDAHDLAEKQIPIRLAVNASFDQQLLNQTLGEIEQA LAISPTVGYDRVVYAFVLTPGLTLDRTALVAEITQTLQLSQTDPLLIPTSPVTANLQASTEQLTAALADREAEWDGVVGI SVYDMETKQWFDYQANTVFSGMSVLKIPILLQSFLSRESFTKNQYAMIDLMIGDSDNEASNDLLAMIGDGDSLEGAYILD QTLTDILGLEYTTLAAPFESIDYLSNVQGVEIPQRGQEGARPYTDADPYVRSSPREMAQVVLAIVECSQGQGVLLAIKDS LLSPERCAEMLEILSRNKDTNKIVAGVAEGSFVAHKSGWIDDARADAGYVRDPNGDEYIVAMWIWQDTDYIDTPVSDPLL ADLSRIIYTARHPQIR >Mature_496_residues MKKAFLLFWVMMLAVLACGIAIYYLPASAAVTPSNSYLERTAAVTSEADVPPLVSSMPPSVWFFPERAKIGSVEIGGMSE DEALAALQAAYPNPTLTLTNPVLLEPIKLDGQQLGYQLDFAQALRDAHDLAEKQIPIRLAVNASFDQQLLNQTLGEIEQA LAISPTVGYDRVVYAFVLTPGLTLDRTALVAEITQTLQLSQTDPLLIPTSPVTANLQASTEQLTAALADREAEWDGVVGI SVYDMETKQWFDYQANTVFSGMSVLKIPILLQSFLSRESFTKNQYAMIDLMIGDSDNEASNDLLAMIGDGDSLEGAYILD QTLTDILGLEYTTLAAPFESIDYLSNVQGVEIPQRGQEGARPYTDADPYVRSSPREMAQVVLAIVECSQGQGVLLAIKDS LLSPERCAEMLEILSRNKDTNKIVAGVAEGSFVAHKSGWIDDARADAGYVRDPNGDEYIVAMWIWQDTDYIDTPVSDPLL ADLSRIIYTARHPQIR
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54260; Mature: 54260
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAFLLFWVMMLAVLACGIAIYYLPASAAVTPSNSYLERTAAVTSEADVPPLVSSMPPS CCHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCHHHHHHHHHHCCCCCCCCHHHCCCCC VWFFPERAKIGSVEIGGMSEDEALAALQAAYPNPTLTLTNPVLLEPIKLDGQQLGYQLDF EEECCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEECCCEEEEEEECCHHHHCEEEHH AQALRDAHDLAEKQIPIRLAVNASFDQQLLNQTLGEIEQALAISPTVGYDRVVYAFVLTP HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECC GLTLDRTALVAEITQTLQLSQTDPLLIPTSPVTANLQASTEQLTAALADREAEWDGVVGI CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEECCCHHHHHHHHHHHCCCCCCCCEEEE SVYDMETKQWFDYQANTVFSGMSVLKIPILLQSFLSRESFTKNQYAMIDLMIGDSDNEAS EEEECCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC NDLLAMIGDGDSLEGAYILDQTLTDILGLEYTTLAAPFESIDYLSNVQGVEIPQRGQEGA CCEEEEECCCCCCCCEEEHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC RPYTDADPYVRSSPREMAQVVLAIVECSQGQGVLLAIKDSLLSPERCAEMLEILSRNKDT CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC NKIVAGVAEGSFVAHKSGWIDDARADAGYVRDPNGDEYIVAMWIWQDTDYIDTPVSDPLL CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHH ADLSRIIYTARHPQIR HHHHHHHHHCCCCCCC >Mature Secondary Structure MKKAFLLFWVMMLAVLACGIAIYYLPASAAVTPSNSYLERTAAVTSEADVPPLVSSMPPS CCHHHHHHHHHHHHHHHHHHEEEEECCCCEECCCHHHHHHHHHHCCCCCCCCHHHCCCCC VWFFPERAKIGSVEIGGMSEDEALAALQAAYPNPTLTLTNPVLLEPIKLDGQQLGYQLDF EEECCCCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEECCCEEEEEEECCHHHHCEEEHH AQALRDAHDLAEKQIPIRLAVNASFDQQLLNQTLGEIEQALAISPTVGYDRVVYAFVLTP HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEECC GLTLDRTALVAEITQTLQLSQTDPLLIPTSPVTANLQASTEQLTAALADREAEWDGVVGI CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEECCCHHHHHHHHHHHCCCCCCCCEEEE SVYDMETKQWFDYQANTVFSGMSVLKIPILLQSFLSRESFTKNQYAMIDLMIGDSDNEAS EEEECCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCC NDLLAMIGDGDSLEGAYILDQTLTDILGLEYTTLAAPFESIDYLSNVQGVEIPQRGQEGA CCEEEEECCCCCCCCEEEHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC RPYTDADPYVRSSPREMAQVVLAIVECSQGQGVLLAIKDSLLSPERCAEMLEILSRNKDT CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC NKIVAGVAEGSFVAHKSGWIDDARADAGYVRDPNGDEYIVAMWIWQDTDYIDTPVSDPLL CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHH ADLSRIIYTARHPQIR HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA