| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897997
Identifier: 159897997
GI number: 159897997
Start: 1716301
End: 1718472
Strand: Reverse
Name: 159897997
Synonym: Haur_1472
Alternate gene names: NA
Gene position: 1718472-1716301 (Counterclockwise)
Preceding gene: 159898000
Following gene: 159897993
Centisome position: 27.08
GC content: 50.05
Gene sequence:
>2172_bases ATGGTACAACCATGGGTGACGTTCAATGCCAATTCAGCTTGGCTCTGGTATAATCGCGCAGTTATTTTGGAAATCGAGGC ACACTACATGGGGCGGCGTGTTGCAAGTTGGGTCTGGGTTTTAGGGCTGTATAGCATTTTAGCGATCGGTTTAACCTGGC CGTTGATCACAGTTTGGGATAGCCAGATTCCAGGCCAAGCCCATAAAGACGGCTTAGAAGATGCCTATCAGAATATTTGG AACCTGTGGTGGATGCGTCAGGCGATCAGTCAGCCCACGAATCCATTAATAACCGATCGATTTTTTCACCCTGAAACTCC TAATTTGTACTATCACACCCTCTCACCGATCAATACCATCTTAGCCACCCCGATCACGGCGATCTGGGGGCCAATTGCTG GGTTTAACAGTTTAGTACTACTATCGTTCATCGTTGGAGCATTTGGCGCTTGGAAGTTGGCCTATGATCGGGTTGGTTCT GCTTGGATCGCCCTCCCAGCAGGGGTGATCTTTGCTTGGAACCCTTTTCATGTAGCCTCGGTGGTTGAAGACGGCCAGCT GCAAATTTTCTGTTTGCAATGGATACCATTTTATCTTTTGTATGCTTGGCGATTGGCCGAACGTGGCGATCGCCGTTCGT TAGGCTTGGCGGGGCTTTTTCTCGGCCTAACCATTTGGACTGATTGGTATTTTAGTTTGTTTTTGTTGCTTTGGACACTG GGCTTTGGGCTTTGGCAGTTTTGGCGCAGCGAATGGCCACAACGCAAACGCTTATTCATACAATTTGGCCTGCTGGGAAT AATTGGGATGCTCACAGCTCTGCCGTTATTAGTGCCAATGTTAATCGAGGCCAGCCGCGCCGATTATATGCAACTCTACC CTGAAAATGATCCGGTGCGGCTTTCAGCAGATTTGGCGGCGTTTGTGGTTCCAGCTCGCTTACATAGCCTTTGGGGCCGC TTCTTCAGCGACTTGCCGAGCGCAATCAATCGACGCTTATATTTGGGGGTTGTGCCACTTAGCTTGGCACTCATAGCAAC GTGGAAAACAGCCAAAGCCCGGCCTTGGCTGATTATGACGTTAATTCTGGCAATTTTAGCCTTGGGGCCAACGCTTAAAC TTGCGGGCACAACCACGACGATTCCGCTGCCCTACCGTTTAATTCAGCAACTACCATTTATTAGTTTGGCTCGCCAACCT GATCGCTTTATGGTGCTAGGAATGCTAACCTTGGCAATCGCTAGCAGCTATGGCTTGGTTTGGCTCAGCAGCAAATTAAT CTGGCAACGCACATTGGCGCTGGTGATCGTCGTTATGATTGGGATTGAATATCTGCCAACGCCCTTTGACATGCGCCAAC CACCAATGCCCCAAAGCTTAGCCCAATTGCCCAAAACCGACGATGCTGCCCTGCTCGAATTGCCGTTTCATGAGGATTTG CCCTATCGTGATGCAGAGCGCATGTTGTTTCAAACCGTGCATGGCCGCCCAATCAGCGGTGGCTATCACTCGCGGCTGTA TCCACAGCCACAATATCAATTGCCAGTGCTCCGCGATTTAGCCACGCTGAGCCAGCACCCAGAAATTGTACAAACCGCAG GCAATTGGCAACAACAATTAGCAACATTGAATTTTGGCTATATCGTGGGCTACAAGCAACAGGCAAACGGGCCACGCAAC TATAGCCCCGCACAAATTGCCGAGTTTAAACAATTTGTCGAGGCTAATTTAGGGGTGACGCAACCGCTGGCCGAAGATAA TTTTGTGGTGATCTATCAAGTGCCACAGGCTCAAGGCGTGCCAATTATCAATCTACGTGATGGTTGGGGCAAGTTAGAGC CAAGCGCAACTGGCAATTATCGCTGGATGGGCCAGGCAGCCAGTTTGGGCTTGATCGTGCCTGAGGCTGGTTTTTATCGT TTGCGTTGGCAGGCAACCCCGGCTGCAATTGCCCGAAGCTTACAACTTTCTTGGCACCATAATCAATTAAGCATCCCGAT CAGCCTTGAGCCACGCCAATACGAAGTGCTGATTGAGCTGCCTGCGGGCCAAACCATCGTGCAATTACAAACACTTGAAC CAGCGACAACCGGCGACGCAATTGCCAACAACGGCGATCAACGGCTAATCAGCCTGCAATTGAGCAATCTGCAACTGATC AGCACTAAATAA
Upstream 100 bases:
>100_bases TATCGCTAGAGTACGTTTGTAAACCAACGGAGAACCTTACGAATACACATTGATGAAAACGATTTCAGTCCTATTATAGC TAGTGCTAAATGGGTAGAAC
Downstream 100 bases:
>100_bases TTATGGCAAGTTCTTTTTGATCATGGCATAGATTGCAGGTTGGAGCTGTGGGCGAGCTTGTTCGAGCAGCCAGCGCTCAA AAACGTGATTCGGATCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 723; Mature: 723
Protein sequence:
>723_residues MVQPWVTFNANSAWLWYNRAVILEIEAHYMGRRVASWVWVLGLYSILAIGLTWPLITVWDSQIPGQAHKDGLEDAYQNIW NLWWMRQAISQPTNPLITDRFFHPETPNLYYHTLSPINTILATPITAIWGPIAGFNSLVLLSFIVGAFGAWKLAYDRVGS AWIALPAGVIFAWNPFHVASVVEDGQLQIFCLQWIPFYLLYAWRLAERGDRRSLGLAGLFLGLTIWTDWYFSLFLLLWTL GFGLWQFWRSEWPQRKRLFIQFGLLGIIGMLTALPLLVPMLIEASRADYMQLYPENDPVRLSADLAAFVVPARLHSLWGR FFSDLPSAINRRLYLGVVPLSLALIATWKTAKARPWLIMTLILAILALGPTLKLAGTTTTIPLPYRLIQQLPFISLARQP DRFMVLGMLTLAIASSYGLVWLSSKLIWQRTLALVIVVMIGIEYLPTPFDMRQPPMPQSLAQLPKTDDAALLELPFHEDL PYRDAERMLFQTVHGRPISGGYHSRLYPQPQYQLPVLRDLATLSQHPEIVQTAGNWQQQLATLNFGYIVGYKQQANGPRN YSPAQIAEFKQFVEANLGVTQPLAEDNFVVIYQVPQAQGVPIINLRDGWGKLEPSATGNYRWMGQAASLGLIVPEAGFYR LRWQATPAAIARSLQLSWHHNQLSIPISLEPRQYEVLIELPAGQTIVQLQTLEPATTGDAIANNGDQRLISLQLSNLQLI STK
Sequences:
>Translated_723_residues MVQPWVTFNANSAWLWYNRAVILEIEAHYMGRRVASWVWVLGLYSILAIGLTWPLITVWDSQIPGQAHKDGLEDAYQNIW NLWWMRQAISQPTNPLITDRFFHPETPNLYYHTLSPINTILATPITAIWGPIAGFNSLVLLSFIVGAFGAWKLAYDRVGS AWIALPAGVIFAWNPFHVASVVEDGQLQIFCLQWIPFYLLYAWRLAERGDRRSLGLAGLFLGLTIWTDWYFSLFLLLWTL GFGLWQFWRSEWPQRKRLFIQFGLLGIIGMLTALPLLVPMLIEASRADYMQLYPENDPVRLSADLAAFVVPARLHSLWGR FFSDLPSAINRRLYLGVVPLSLALIATWKTAKARPWLIMTLILAILALGPTLKLAGTTTTIPLPYRLIQQLPFISLARQP DRFMVLGMLTLAIASSYGLVWLSSKLIWQRTLALVIVVMIGIEYLPTPFDMRQPPMPQSLAQLPKTDDAALLELPFHEDL PYRDAERMLFQTVHGRPISGGYHSRLYPQPQYQLPVLRDLATLSQHPEIVQTAGNWQQQLATLNFGYIVGYKQQANGPRN YSPAQIAEFKQFVEANLGVTQPLAEDNFVVIYQVPQAQGVPIINLRDGWGKLEPSATGNYRWMGQAASLGLIVPEAGFYR LRWQATPAAIARSLQLSWHHNQLSIPISLEPRQYEVLIELPAGQTIVQLQTLEPATTGDAIANNGDQRLISLQLSNLQLI STK >Mature_723_residues MVQPWVTFNANSAWLWYNRAVILEIEAHYMGRRVASWVWVLGLYSILAIGLTWPLITVWDSQIPGQAHKDGLEDAYQNIW NLWWMRQAISQPTNPLITDRFFHPETPNLYYHTLSPINTILATPITAIWGPIAGFNSLVLLSFIVGAFGAWKLAYDRVGS AWIALPAGVIFAWNPFHVASVVEDGQLQIFCLQWIPFYLLYAWRLAERGDRRSLGLAGLFLGLTIWTDWYFSLFLLLWTL GFGLWQFWRSEWPQRKRLFIQFGLLGIIGMLTALPLLVPMLIEASRADYMQLYPENDPVRLSADLAAFVVPARLHSLWGR FFSDLPSAINRRLYLGVVPLSLALIATWKTAKARPWLIMTLILAILALGPTLKLAGTTTTIPLPYRLIQQLPFISLARQP DRFMVLGMLTLAIASSYGLVWLSSKLIWQRTLALVIVVMIGIEYLPTPFDMRQPPMPQSLAQLPKTDDAALLELPFHEDL PYRDAERMLFQTVHGRPISGGYHSRLYPQPQYQLPVLRDLATLSQHPEIVQTAGNWQQQLATLNFGYIVGYKQQANGPRN YSPAQIAEFKQFVEANLGVTQPLAEDNFVVIYQVPQAQGVPIINLRDGWGKLEPSATGNYRWMGQAASLGLIVPEAGFYR LRWQATPAAIARSLQLSWHHNQLSIPISLEPRQYEVLIELPAGQTIVQLQTLEPATTGDAIANNGDQRLISLQLSNLQLI STK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81823; Mature: 81823
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQPWVTFNANSAWLWYNRAVILEIEAHYMGRRVASWVWVLGLYSILAIGLTWPLITVWD CCCCEEEECCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC SQIPGQAHKDGLEDAYQNIWNLWWMRQAISQPTNPLITDRFFHPETPNLYYHTLSPINTI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH LATPITAIWGPIAGFNSLVLLSFIVGAFGAWKLAYDRVGSAWIALPAGVIFAWNPFHVAS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCHHHHH VVEDGQLQIFCLQWIPFYLLYAWRLAERGDRRSLGLAGLFLGLTIWTDWYFSLFLLLWTL HCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GFGLWQFWRSEWPQRKRLFIQFGLLGIIGMLTALPLLVPMLIEASRADYMQLYPENDPVR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEE LSADLAAFVVPARLHSLWGRFFSDLPSAINRRLYLGVVPLSLALIATWKTAKARPWLIMT EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCCCCCCHHHHH LILAILALGPTLKLAGTTTTIPLPYRLIQQLPFISLARQPDRFMVLGMLTLAIASSYGLV HHHHHHHCCCCEEECCCCEECCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCEE WLSSKLIWQRTLALVIVVMIGIEYLPTPFDMRQPPMPQSLAQLPKTDDAALLELPFHEDL EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCC PYRDAERMLFQTVHGRPISGGYHSRLYPQPQYQLPVLRDLATLSQHPEIVQTAGNWQQQL CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHH ATLNFGYIVGYKQQANGPRNYSPAQIAEFKQFVEANLGVTQPLAEDNFVVIYQVPQAQGV HHCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC PIINLRDGWGKLEPSATGNYRWMGQAASLGLIVPEAGFYRLRWQATPAAIARSLQLSWHH EEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEEECCHHHHHHHHEEEEEC NQLSIPISLEPRQYEVLIELPAGQTIVQLQTLEPATTGDAIANNGDQRLISLQLSNLQLI CEEEEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHCCCCCEEEEEEECCEEEE STK ECC >Mature Secondary Structure MVQPWVTFNANSAWLWYNRAVILEIEAHYMGRRVASWVWVLGLYSILAIGLTWPLITVWD CCCCEEEECCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC SQIPGQAHKDGLEDAYQNIWNLWWMRQAISQPTNPLITDRFFHPETPNLYYHTLSPINTI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHH LATPITAIWGPIAGFNSLVLLSFIVGAFGAWKLAYDRVGSAWIALPAGVIFAWNPFHVAS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCHHHHH VVEDGQLQIFCLQWIPFYLLYAWRLAERGDRRSLGLAGLFLGLTIWTDWYFSLFLLLWTL HCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GFGLWQFWRSEWPQRKRLFIQFGLLGIIGMLTALPLLVPMLIEASRADYMQLYPENDPVR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEE LSADLAAFVVPARLHSLWGRFFSDLPSAINRRLYLGVVPLSLALIATWKTAKARPWLIMT EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCCCCCCHHHHH LILAILALGPTLKLAGTTTTIPLPYRLIQQLPFISLARQPDRFMVLGMLTLAIASSYGLV HHHHHHHCCCCEEECCCCEECCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCEE WLSSKLIWQRTLALVIVVMIGIEYLPTPFDMRQPPMPQSLAQLPKTDDAALLELPFHEDL EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCC PYRDAERMLFQTVHGRPISGGYHSRLYPQPQYQLPVLRDLATLSQHPEIVQTAGNWQQQL CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHH ATLNFGYIVGYKQQANGPRNYSPAQIAEFKQFVEANLGVTQPLAEDNFVVIYQVPQAQGV HHCCCEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC PIINLRDGWGKLEPSATGNYRWMGQAASLGLIVPEAGFYRLRWQATPAAIARSLQLSWHH EEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCCCEEEEEEECCHHHHHHHHEEEEEC NQLSIPISLEPRQYEVLIELPAGQTIVQLQTLEPATTGDAIANNGDQRLISLQLSNLQLI CEEEEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHCCCCCEEEEEEECCEEEE STK ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA