| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897742
Identifier: 159897742
GI number: 159897742
Start: 1397687
End: 1398481
Strand: Reverse
Name: 159897742
Synonym: Haur_1213
Alternate gene names: NA
Gene position: 1398481-1397687 (Counterclockwise)
Preceding gene: 159897749
Following gene: 159897737
Centisome position: 22.04
GC content: 49.81
Gene sequence:
>795_bases GTGGCTAGTCTACGTGTGGGGCATTGGGTTTGGGTGGGCTATTTGTTTGTTTGGGCTTGGAGCGTGCCATTATTGGCCTT TGATCTGGTGCCAGCTGGCGGCGAATTTATGGCAACTGTGATGTTGGTTGTGCCAGGTGGGCTGACGGCGTGGTGGTTAA TTCAACGTTATGGCAAGTTAGGCTGGCTCAGCAGCATTATAATTGCGGTTGGCTCATGGCTCACCGAGCATCTTGGGGTT ACCACAGGCTGGCCGTTTGGCGCATATCAATATAATGGTGTGCTTTTGCCCGAAATTGTTGGAGTTGTACCATTGGCAAT TCCGTTTGCCTGGCTGTTGGTTGTGCCAGGCGCACTCGAATTAAGCCGGATGCTGATGCCAAAAGTTGGTTTTTGGCCAA CGGTTTTAGGTGCTGCCAGCCTTGCCATGCTGTTTGATTTGGTGATCGAGCCAGTCGCGGTGTATGTCAATCGCTATTGG ACATGGCTCGAAACTGGCCCGATGTTTGGGATTCCCACCGCCAATTTTGTAGCGTGGTGGGGCTTAGCTTTCATTTTAGC CTTGGCAACAGAAATGCTTGGACAACGCACCAACAACCTACCCCAAAGCCCAAAACTCAACTTGCCAATAGCGATCTATT TGCTCAATTTAGCGCTGTTCACAATTGTCAATCTGACCCATCAGCAATTGGCTGCGGGAGCTTTGGGTTTATTATTGTTG GCTGGTTTTGGCTGGCGCTTACACCAACGCCAGATTGGTTGGCATTGGCGTTATGATCAACTAATTCAACAATGA
Upstream 100 bases:
>100_bases GATCAAGCATATGCAGAGATTTTGAACATGAATGCATCCATCCTAGCGGCACTAGAGTAAGATCGCAAGAGACGATTTTA CTATTTCAGGGGTGAACTTT
Downstream 100 bases:
>100_bases TTATGTCAATAAATTTCGTAGCCGTGCAGCCAAACGATCAAGCAACGGCGCATCGTCATCAACTAAGCCAAGTTGAGCGG CTTTACGGCCAATCGTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MASLRVGHWVWVGYLFVWAWSVPLLAFDLVPAGGEFMATVMLVVPGGLTAWWLIQRYGKLGWLSSIIIAVGSWLTEHLGV TTGWPFGAYQYNGVLLPEIVGVVPLAIPFAWLLVVPGALELSRMLMPKVGFWPTVLGAASLAMLFDLVIEPVAVYVNRYW TWLETGPMFGIPTANFVAWWGLAFILALATEMLGQRTNNLPQSPKLNLPIAIYLLNLALFTIVNLTHQQLAAGALGLLLL AGFGWRLHQRQIGWHWRYDQLIQQ
Sequences:
>Translated_264_residues MASLRVGHWVWVGYLFVWAWSVPLLAFDLVPAGGEFMATVMLVVPGGLTAWWLIQRYGKLGWLSSIIIAVGSWLTEHLGV TTGWPFGAYQYNGVLLPEIVGVVPLAIPFAWLLVVPGALELSRMLMPKVGFWPTVLGAASLAMLFDLVIEPVAVYVNRYW TWLETGPMFGIPTANFVAWWGLAFILALATEMLGQRTNNLPQSPKLNLPIAIYLLNLALFTIVNLTHQQLAAGALGLLLL AGFGWRLHQRQIGWHWRYDQLIQQ >Mature_263_residues ASLRVGHWVWVGYLFVWAWSVPLLAFDLVPAGGEFMATVMLVVPGGLTAWWLIQRYGKLGWLSSIIIAVGSWLTEHLGVT TGWPFGAYQYNGVLLPEIVGVVPLAIPFAWLLVVPGALELSRMLMPKVGFWPTVLGAASLAMLFDLVIEPVAVYVNRYWT WLETGPMFGIPTANFVAWWGLAFILALATEMLGQRTNNLPQSPKLNLPIAIYLLNLALFTIVNLTHQQLAAGALGLLLLA GFGWRLHQRQIGWHWRYDQLIQQ
Specific function: Unknown
COG id: COG2324
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29433; Mature: 29302
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLRVGHWVWVGYLFVWAWSVPLLAFDLVPAGGEFMATVMLVVPGGLTAWWLIQRYGKL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCH GWLSSIIIAVGSWLTEHLGVTTGWPFGAYQYNGVLLPEIVGVVPLAIPFAWLLVVPGALE HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEHHHHHHHHHHHHHHHHHHHHCCHHH LSRMLMPKVGFWPTVLGAASLAMLFDLVIEPVAVYVNRYWTWLETGPMFGIPTANFVAWW HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH GLAFILALATEMLGQRTNNLPQSPKLNLPIAIYLLNLALFTIVNLTHQQLAAGALGLLLL HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFGWRLHQRQIGWHWRYDQLIQQ HCCCHHHHHHHCCCCCCHHHHHCC >Mature Secondary Structure ASLRVGHWVWVGYLFVWAWSVPLLAFDLVPAGGEFMATVMLVVPGGLTAWWLIQRYGKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCH GWLSSIIIAVGSWLTEHLGVTTGWPFGAYQYNGVLLPEIVGVVPLAIPFAWLLVVPGALE HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEHHHHHHHHHHHHHHHHHHHHCCHHH LSRMLMPKVGFWPTVLGAASLAMLFDLVIEPVAVYVNRYWTWLETGPMFGIPTANFVAWW HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH GLAFILALATEMLGQRTNNLPQSPKLNLPIAIYLLNLALFTIVNLTHQQLAAGALGLLLL HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFGWRLHQRQIGWHWRYDQLIQQ HCCCHHHHHHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA