Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897742

Identifier: 159897742

GI number: 159897742

Start: 1397687

End: 1398481

Strand: Reverse

Name: 159897742

Synonym: Haur_1213

Alternate gene names: NA

Gene position: 1398481-1397687 (Counterclockwise)

Preceding gene: 159897749

Following gene: 159897737

Centisome position: 22.04

GC content: 49.81

Gene sequence:

>795_bases
GTGGCTAGTCTACGTGTGGGGCATTGGGTTTGGGTGGGCTATTTGTTTGTTTGGGCTTGGAGCGTGCCATTATTGGCCTT
TGATCTGGTGCCAGCTGGCGGCGAATTTATGGCAACTGTGATGTTGGTTGTGCCAGGTGGGCTGACGGCGTGGTGGTTAA
TTCAACGTTATGGCAAGTTAGGCTGGCTCAGCAGCATTATAATTGCGGTTGGCTCATGGCTCACCGAGCATCTTGGGGTT
ACCACAGGCTGGCCGTTTGGCGCATATCAATATAATGGTGTGCTTTTGCCCGAAATTGTTGGAGTTGTACCATTGGCAAT
TCCGTTTGCCTGGCTGTTGGTTGTGCCAGGCGCACTCGAATTAAGCCGGATGCTGATGCCAAAAGTTGGTTTTTGGCCAA
CGGTTTTAGGTGCTGCCAGCCTTGCCATGCTGTTTGATTTGGTGATCGAGCCAGTCGCGGTGTATGTCAATCGCTATTGG
ACATGGCTCGAAACTGGCCCGATGTTTGGGATTCCCACCGCCAATTTTGTAGCGTGGTGGGGCTTAGCTTTCATTTTAGC
CTTGGCAACAGAAATGCTTGGACAACGCACCAACAACCTACCCCAAAGCCCAAAACTCAACTTGCCAATAGCGATCTATT
TGCTCAATTTAGCGCTGTTCACAATTGTCAATCTGACCCATCAGCAATTGGCTGCGGGAGCTTTGGGTTTATTATTGTTG
GCTGGTTTTGGCTGGCGCTTACACCAACGCCAGATTGGTTGGCATTGGCGTTATGATCAACTAATTCAACAATGA

Upstream 100 bases:

>100_bases
GATCAAGCATATGCAGAGATTTTGAACATGAATGCATCCATCCTAGCGGCACTAGAGTAAGATCGCAAGAGACGATTTTA
CTATTTCAGGGGTGAACTTT

Downstream 100 bases:

>100_bases
TTATGTCAATAAATTTCGTAGCCGTGCAGCCAAACGATCAAGCAACGGCGCATCGTCATCAACTAAGCCAAGTTGAGCGG
CTTTACGGCCAATCGTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MASLRVGHWVWVGYLFVWAWSVPLLAFDLVPAGGEFMATVMLVVPGGLTAWWLIQRYGKLGWLSSIIIAVGSWLTEHLGV
TTGWPFGAYQYNGVLLPEIVGVVPLAIPFAWLLVVPGALELSRMLMPKVGFWPTVLGAASLAMLFDLVIEPVAVYVNRYW
TWLETGPMFGIPTANFVAWWGLAFILALATEMLGQRTNNLPQSPKLNLPIAIYLLNLALFTIVNLTHQQLAAGALGLLLL
AGFGWRLHQRQIGWHWRYDQLIQQ

Sequences:

>Translated_264_residues
MASLRVGHWVWVGYLFVWAWSVPLLAFDLVPAGGEFMATVMLVVPGGLTAWWLIQRYGKLGWLSSIIIAVGSWLTEHLGV
TTGWPFGAYQYNGVLLPEIVGVVPLAIPFAWLLVVPGALELSRMLMPKVGFWPTVLGAASLAMLFDLVIEPVAVYVNRYW
TWLETGPMFGIPTANFVAWWGLAFILALATEMLGQRTNNLPQSPKLNLPIAIYLLNLALFTIVNLTHQQLAAGALGLLLL
AGFGWRLHQRQIGWHWRYDQLIQQ
>Mature_263_residues
ASLRVGHWVWVGYLFVWAWSVPLLAFDLVPAGGEFMATVMLVVPGGLTAWWLIQRYGKLGWLSSIIIAVGSWLTEHLGVT
TGWPFGAYQYNGVLLPEIVGVVPLAIPFAWLLVVPGALELSRMLMPKVGFWPTVLGAASLAMLFDLVIEPVAVYVNRYWT
WLETGPMFGIPTANFVAWWGLAFILALATEMLGQRTNNLPQSPKLNLPIAIYLLNLALFTIVNLTHQQLAAGALGLLLLA
GFGWRLHQRQIGWHWRYDQLIQQ

Specific function: Unknown

COG id: COG2324

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29433; Mature: 29302

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCHHHHHHHCCCCCCHHHHHCC
>Mature Secondary Structure 
ASLRVGHWVWVGYLFVWAWSVPLLAFDLVPAGGEFMATVMLVVPGGLTAWWLIQRYGKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCH
GWLSSIIIAVGSWLTEHLGVTTGWPFGAYQYNGVLLPEIVGVVPLAIPFAWLLVVPGALE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEHHHHHHHHHHHHHHHHHHHHCCHHH
LSRMLMPKVGFWPTVLGAASLAMLFDLVIEPVAVYVNRYWTWLETGPMFGIPTANFVAWW
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
GLAFILALATEMLGQRTNNLPQSPKLNLPIAIYLLNLALFTIVNLTHQQLAAGALGLLLL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFGWRLHQRQIGWHWRYDQLIQQ
HCCCHHHHHHHCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA