Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yjeB [C]

Identifier: 159897735

GI number: 159897735

Start: 1389785

End: 1390204

Strand: Direct

Name: yjeB [C]

Synonym: Haur_1206

Alternate gene names: 159897735

Gene position: 1389785-1390204 (Clockwise)

Preceding gene: 159897729

Following gene: 159897736

Centisome position: 21.9

GC content: 49.05

Gene sequence:

>420_bases
ATGAGTTATTCACTGGCGTTTTCACAGGCAATTGCCATCAGCCTCTACATCACCTATAAAATCGAGGAACAAATCTACGA
TTTTGTGCCAACCCATGAAATCGCCGATTTTTTAGGTATTGCCAAGCCAAGCGTGGTTAAGGTTGTACAATCGCTGACCA
ATGCCGGCCTAATTGAAACCCGCGAGGGAGCGAAAGGCGGCGTGCGCTTAACTCGTAACAGTCAGGCGATTAATCTCTTG
GATATTTTTAACGCGATCGAGCAAGCCAAACCCTTGTTTCGGCTGAATATTCACCCAACCGAGCCGAAAATCGAGGCACT
AGCCGCCCGTCAACGTATGGTCGCCAGCCTGCAACGAGCCGAAGCAGCCATGAAACAAGAGTTGCAAGCGGTTACCTTAG
CGGATCTTTATAGCGGTTGA

Upstream 100 bases:

>100_bases
GCTCTTGCTCACGATTTAGTATAGCATGATCAAAAATTCATGCTTGACAAATGTTGAACTCAATATACAATATATCTAGT
ATAAATTATTGGCGAGCGTT

Downstream 100 bases:

>100_bases
TTTTTTTAGAATAAACTCTCTATTCTTAGGATATAGTTTATTCTATTATACTGGTCTCTTTTTTTATCTAAAACTAGATA
AACTATTTGTCTAGTTTATT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; BadM/Rrf2 Family Transcriptional Regulator; Transcriptional Regulator BadM/Rrf2 Family

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSYSLAFSQAIAISLYITYKIEEQIYDFVPTHEIADFLGIAKPSVVKVVQSLTNAGLIETREGAKGGVRLTRNSQAINLL
DIFNAIEQAKPLFRLNIHPTEPKIEALAARQRMVASLQRAEAAMKQELQAVTLADLYSG

Sequences:

>Translated_139_residues
MSYSLAFSQAIAISLYITYKIEEQIYDFVPTHEIADFLGIAKPSVVKVVQSLTNAGLIETREGAKGGVRLTRNSQAINLL
DIFNAIEQAKPLFRLNIHPTEPKIEALAARQRMVASLQRAEAAMKQELQAVTLADLYSG
>Mature_138_residues
SYSLAFSQAIAISLYITYKIEEQIYDFVPTHEIADFLGIAKPSVVKVVQSLTNAGLIETREGAKGGVRLTRNSQAINLLD
IFNAIEQAKPLFRLNIHPTEPKIEALAARQRMVASLQRAEAAMKQELQAVTLADLYSG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15335; Mature: 15204

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSLAFSQAIAISLYITYKIEEQIYDFVPTHEIADFLGIAKPSVVKVVQSLTNAGLIET
CCCCHHHHHHEEEEEEEEEEEHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEC
REGAKGGVRLTRNSQAINLLDIFNAIEQAKPLFRLNIHPTEPKIEALAARQRMVASLQRA
CCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EAAMKQELQAVTLADLYSG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYSLAFSQAIAISLYITYKIEEQIYDFVPTHEIADFLGIAKPSVVKVVQSLTNAGLIET
CCCHHHHHHEEEEEEEEEEEHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEC
REGAKGGVRLTRNSQAINLLDIFNAIEQAKPLFRLNIHPTEPKIEALAARQRMVASLQRA
CCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EAAMKQELQAVTLADLYSG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA