| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is guaB [H]
Identifier: 159897729
GI number: 159897729
Start: 1382713
End: 1384191
Strand: Direct
Name: guaB [H]
Synonym: Haur_1200
Alternate gene names: 159897729
Gene position: 1382713-1384191 (Clockwise)
Preceding gene: 159897727
Following gene: 159897735
Centisome position: 21.79
GC content: 53.35
Gene sequence:
>1479_bases ATGCCAATCGATTGGAGTGCTAAGTTCGCGTTTGAAGGGCTGACCTATGATGATGTGCTGTTGATTCCAGCCTACTCGGA TGTCTTGCCTTCACAAATCGACGTTAGCACGTGGCTAACCCGCGAGATTCGTTTGAACATTCCAGTTGTCTCATCTGCGA TGGATACGGTGACCGAAGATCGCATGGCAATTGCGCTGGCTCGCGAAGGTGGCCTTGGCATTATTCACAAAAATATGGCT CCTGCCCAACAAGCAGATTTGGTGCGGCGGGTCAAACGCTCAGAAAGTGGCATGATCACTGATCCCATCACTTTGCGCCC CGAACAAACCATCGGCGAAGCCTGGGAACTCATGAGCGATTACCATATTTCAGGGGTGCCGATTACCAGCGCTGCTGGCG AACTCGTCGGGATACTTACCAACCGCGATTTACGCTTTGAAACCGACCCCAGCCGCAAAATCAGCGAATTGATGACCAGC GAAGAATTGGTCACCGTGCCAGTTGGCACAACCCTCGAACAAGCCAAACAAGCCTTGCATCAACACCGGATCGAAAAGGT TTTGGTGGTTGATGAACATGGCAAACTCAATGGTCTGATCACGGTCAAGGATATTCAAAAGCAGATCGAACATCCTAACG CCACCAAAGATGCTTATGGCCGCTTGCGAGTTGGCGCTGCCGTCGGCGCTTCGACCAGCGAACTCGAGCGGGTGCGTTTG TTGGTTGAGGCTGGGGTTGATGTGATTGCGGTCGATACTGCTCATGGCCACTCCAAAGCCGTGCTCGATGCAATTGCCCG CATCAAACAACAATATCCTGAGCTGCAAATCATTGGTGGGAATGTGAGTACTGGCGAAGGTGCTCGTGCCTTGATCGAAC ACGGCGCTGATGCGGTTAAGGTCGGACAAGGGCCCGGATCGATTTGTACCACTCGGGTGGTATCAGGTGCGGGGATGGCC CAAGTTACAGCGGTAATGGAGTGTGTTAAAGCTGCCGAAGAAGCTGGCGTGCCAATCATTGCTGATGGTGGGATTAAGTA TAGTGGTGATGTGGCCAAAGCACTGGCTGCCGGCGCACACACGGTTATGCTGGGTGGCTTATTAGCAGGAACCGACGAAT CGCCAGGCGAGATGATTCTCTACCAAGGCCGCTCATTCAAATCGTATCGTGGCATGGGTTCGATTGGTGCGATGCAGCAA GGCAGTAGCGACCGCTATTTCCAAAGCAACCAGCCTGCTCGCAAGTTGGTGGCCGAAGGAATTGAAGGGATGGTTCCCTA CAAAGGCGCATTGGCCGATACCATTTATCAATTGGTCGGTGGTTTGCGCTCAGGTATGGGCTATGTTGGGGCGCATAATG TTGATGAATTGCGCAAGAATGCCCGCTTCTCGCGGATTTCGCCCGCAGGTTTGGCCGAAAGCCATCCCCACGATGTAACG ATCACCAACGAAGCTCCCAACTACGAGCGCCGCGGCTAG
Upstream 100 bases:
>100_bases ATCGGCAATCGGACAACTGAAGGATGACGCAAGGTTCTGCGTCGGATGGCTCACTGCATCCTGCGGTGAGCTTTTCATAT ATCCCAAGGAGGATAACCCC
Downstream 100 bases:
>100_bases AATTCAAACCAGCCCTGCTTCCTTAAAATTGGAAGCAGGGCTGAAATGTTAACCAACCTGAGCGCTATCGTTGCCAACAG CGGCTAAGGTTTCCTTTAAA
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MPIDWSAKFAFEGLTYDDVLLIPAYSDVLPSQIDVSTWLTREIRLNIPVVSSAMDTVTEDRMAIALAREGGLGIIHKNMA PAQQADLVRRVKRSESGMITDPITLRPEQTIGEAWELMSDYHISGVPITSAAGELVGILTNRDLRFETDPSRKISELMTS EELVTVPVGTTLEQAKQALHQHRIEKVLVVDEHGKLNGLITVKDIQKQIEHPNATKDAYGRLRVGAAVGASTSELERVRL LVEAGVDVIAVDTAHGHSKAVLDAIARIKQQYPELQIIGGNVSTGEGARALIEHGADAVKVGQGPGSICTTRVVSGAGMA QVTAVMECVKAAEEAGVPIIADGGIKYSGDVAKALAAGAHTVMLGGLLAGTDESPGEMILYQGRSFKSYRGMGSIGAMQQ GSSDRYFQSNQPARKLVAEGIEGMVPYKGALADTIYQLVGGLRSGMGYVGAHNVDELRKNARFSRISPAGLAESHPHDVT ITNEAPNYERRG
Sequences:
>Translated_492_residues MPIDWSAKFAFEGLTYDDVLLIPAYSDVLPSQIDVSTWLTREIRLNIPVVSSAMDTVTEDRMAIALAREGGLGIIHKNMA PAQQADLVRRVKRSESGMITDPITLRPEQTIGEAWELMSDYHISGVPITSAAGELVGILTNRDLRFETDPSRKISELMTS EELVTVPVGTTLEQAKQALHQHRIEKVLVVDEHGKLNGLITVKDIQKQIEHPNATKDAYGRLRVGAAVGASTSELERVRL LVEAGVDVIAVDTAHGHSKAVLDAIARIKQQYPELQIIGGNVSTGEGARALIEHGADAVKVGQGPGSICTTRVVSGAGMA QVTAVMECVKAAEEAGVPIIADGGIKYSGDVAKALAAGAHTVMLGGLLAGTDESPGEMILYQGRSFKSYRGMGSIGAMQQ GSSDRYFQSNQPARKLVAEGIEGMVPYKGALADTIYQLVGGLRSGMGYVGAHNVDELRKNARFSRISPAGLAESHPHDVT ITNEAPNYERRG >Mature_491_residues PIDWSAKFAFEGLTYDDVLLIPAYSDVLPSQIDVSTWLTREIRLNIPVVSSAMDTVTEDRMAIALAREGGLGIIHKNMAP AQQADLVRRVKRSESGMITDPITLRPEQTIGEAWELMSDYHISGVPITSAAGELVGILTNRDLRFETDPSRKISELMTSE ELVTVPVGTTLEQAKQALHQHRIEKVLVVDEHGKLNGLITVKDIQKQIEHPNATKDAYGRLRVGAAVGASTSELERVRLL VEAGVDVIAVDTAHGHSKAVLDAIARIKQQYPELQIIGGNVSTGEGARALIEHGADAVKVGQGPGSICTTRVVSGAGMAQ VTAVMECVKAAEEAGVPIIADGGIKYSGDVAKALAAGAHTVMLGGLLAGTDESPGEMILYQGRSFKSYRGMGSIGAMQQG SSDRYFQSNQPARKLVAEGIEGMVPYKGALADTIYQLVGGLRSGMGYVGAHNVDELRKNARFSRISPAGLAESHPHDVTI TNEAPNYERRG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=455, Percent_Identity=43.5164835164835, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI156616279, Length=455, Percent_Identity=43.5164835164835, Blast_Score=362, Evalue=1e-100, Organism=Homo sapiens, GI34328930, Length=455, Percent_Identity=43.5164835164835, Blast_Score=362, Evalue=1e-100, Organism=Homo sapiens, GI34328928, Length=455, Percent_Identity=43.5164835164835, Blast_Score=362, Evalue=1e-100, Organism=Homo sapiens, GI66933016, Length=455, Percent_Identity=42.4175824175824, Blast_Score=355, Evalue=4e-98, Organism=Homo sapiens, GI217035152, Length=449, Percent_Identity=43.2071269487751, Blast_Score=352, Evalue=4e-97, Organism=Homo sapiens, GI217035148, Length=455, Percent_Identity=42.6373626373626, Blast_Score=350, Evalue=1e-96, Organism=Homo sapiens, GI217035150, Length=455, Percent_Identity=40.6593406593407, Blast_Score=323, Evalue=2e-88, Organism=Homo sapiens, GI156104880, Length=260, Percent_Identity=39.2307692307692, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI50541956, Length=246, Percent_Identity=41.0569105691057, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI50541954, Length=246, Percent_Identity=41.0569105691057, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI50541952, Length=246, Percent_Identity=41.0569105691057, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI50541948, Length=246, Percent_Identity=41.0569105691057, Blast_Score=176, Evalue=4e-44, Organism=Escherichia coli, GI1788855, Length=482, Percent_Identity=59.9585062240664, Blast_Score=523, Evalue=1e-149, Organism=Escherichia coli, GI1786293, Length=256, Percent_Identity=38.28125, Blast_Score=168, Evalue=6e-43, Organism=Caenorhabditis elegans, GI71994385, Length=497, Percent_Identity=34.8088531187123, Blast_Score=282, Evalue=3e-76, Organism=Caenorhabditis elegans, GI71994389, Length=423, Percent_Identity=36.8794326241135, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17560440, Length=259, Percent_Identity=38.996138996139, Blast_Score=177, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6323585, Length=494, Percent_Identity=40.6882591093117, Blast_Score=358, Evalue=1e-99, Organism=Saccharomyces cerevisiae, GI6322012, Length=494, Percent_Identity=40.6882591093117, Blast_Score=357, Evalue=3e-99, Organism=Saccharomyces cerevisiae, GI6323464, Length=464, Percent_Identity=42.6724137931034, Blast_Score=353, Evalue=5e-98, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=42.603550295858, Blast_Score=269, Evalue=9e-73, Organism=Saccharomyces cerevisiae, GI6319353, Length=122, Percent_Identity=40.9836065573771, Blast_Score=88, Evalue=3e-18, Organism=Drosophila melanogaster, GI24641071, Length=494, Percent_Identity=40.080971659919, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24641073, Length=494, Percent_Identity=40.080971659919, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI28571163, Length=452, Percent_Identity=39.6017699115044, Blast_Score=305, Evalue=6e-83,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52606; Mature: 52474
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDWSAKFAFEGLTYDDVLLIPAYSDVLPSQIDVSTWLTREIRLNIPVVSSAMDTVTED CCCCCCCCEEECCCCCCCEEEEECHHHHCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHC RMAIALAREGGLGIIHKNMAPAQQADLVRRVKRSESGMITDPITLRPEQTIGEAWELMSD CEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHC YHISGVPITSAAGELVGILTNRDLRFETDPSRKISELMTSEELVTVPVGTTLEQAKQALH CCCCCCCCCCCCCCEEEEEECCCEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHH QHRIEKVLVVDEHGKLNGLITVKDIQKQIEHPNATKDAYGRLRVGAAVGASTSELERVRL HHHCCEEEEEECCCCCCCEEEHHHHHHHHCCCCCCHHHHCEEEECCCCCCCHHHHHHHHH LVEAGVDVIAVDTAHGHSKAVLDAIARIKQQYPELQIIGGNVSTGEGARALIEHGADAVK HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCEEE VGQGPGSICTTRVVSGAGMAQVTAVMECVKAAEEAGVPIIADGGIKYSGDVAKALAAGAH ECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEECCHHHHHHHCCCH TVMLGGLLAGTDESPGEMILYQGRSFKSYRGMGSIGAMQQGSSDRYFQSNQPARKLVAEG HHHHHHEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IEGMVPYKGALADTIYQLVGGLRSGMGYVGAHNVDELRKNARFSRISPAGLAESHPHDVT HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEE ITNEAPNYERRG ECCCCCCCCCCC >Mature Secondary Structure PIDWSAKFAFEGLTYDDVLLIPAYSDVLPSQIDVSTWLTREIRLNIPVVSSAMDTVTED CCCCCCCEEECCCCCCCEEEEECHHHHCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHC RMAIALAREGGLGIIHKNMAPAQQADLVRRVKRSESGMITDPITLRPEQTIGEAWELMSD CEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHC YHISGVPITSAAGELVGILTNRDLRFETDPSRKISELMTSEELVTVPVGTTLEQAKQALH CCCCCCCCCCCCCCEEEEEECCCEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHH QHRIEKVLVVDEHGKLNGLITVKDIQKQIEHPNATKDAYGRLRVGAAVGASTSELERVRL HHHCCEEEEEECCCCCCCEEEHHHHHHHHCCCCCCHHHHCEEEECCCCCCCHHHHHHHHH LVEAGVDVIAVDTAHGHSKAVLDAIARIKQQYPELQIIGGNVSTGEGARALIEHGADAVK HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCEEE VGQGPGSICTTRVVSGAGMAQVTAVMECVKAAEEAGVPIIADGGIKYSGDVAKALAAGAH ECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEECCHHHHHHHCCCH TVMLGGLLAGTDESPGEMILYQGRSFKSYRGMGSIGAMQQGSSDRYFQSNQPARKLVAEG HHHHHHEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IEGMVPYKGALADTIYQLVGGLRSGMGYVGAHNVDELRKNARFSRISPAGLAESHPHDVT HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEE ITNEAPNYERRG ECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]