| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is glcK [H]
Identifier: 159897710
GI number: 159897710
Start: 1355675
End: 1356685
Strand: Reverse
Name: glcK [H]
Synonym: Haur_1181
Alternate gene names: 159897710
Gene position: 1356685-1355675 (Counterclockwise)
Preceding gene: 159897711
Following gene: 159897709
Centisome position: 21.38
GC content: 53.31
Gene sequence:
>1011_bases GTGGATCAACGACAGCGCCGGAACGCCAATGGCTGGCGGCTGGGAGTCGATGTAGGGGGGACGAAAATTGCCACCCTACT TGTCGATGGCGATAATCGAGTTTGGGCCAGCGTTCAACGCCCAACCGATACCGCAACTCCAGACCATGCCCTCAAGTCTC TTGCTGATGCGATTTGGGAAACCTTGAAACAAGCCGACCTACCCATTCGGCTCCTTGCGGGCATTGGGATTGGCATTCCA GGCCAAGTCGATACGCAGAGCGGGATTGTTCGGCACGCCGTCAATCTTGGCTGGCAAGCAGTTGATCTACGTGGATTCAT CAACGCAACCTTTGGCACGGCCTGTGTGATTGAAAACGATGTTCGAGCAGCAGCATTAGGCATTCAACGCTATTGGTTGG CTGGTTCGATCGATTCGATGTTATATGTTAGTATAGGCACTGGCATAGCCGCTGGCATGATTCTTGATGGTACTGTCTAC CGTGGTAGTCACGGAATGGCGGGCGAAATCGGCCATGCACGCTTCGGATCATCAACAATTCGCTGTCGCTGTGGCAATTA TGGCTGTCTTGAAGCCATCGTTGCTGGGCCAGCAATTGCCAACTATGCACACTCTCTGCTCTCAACATTCCCGCATAGCC AACTGCATCAACTCGATTCGATAACCACTCCAGCAGTTTACGCCGCTGCTGAAGCTGGCGATGATTTAGCGTTGGCAGTT GCCCACATGGTTGGCGAACAACTTGCTCAAGCCCTCTATACCATGGTGCTTGCCTACGATTGCGATCATATTGTGCTTGG AGGCGGTGTTAGCCGCGCAGGCTCAGCCTTCTTCGCACCAATCGAACAAGCACTTGATGTCTTACGTCAGCAAAGTTCTC TAGCAACATCATTACTTCCGACGGGGCGGGTTAAGCTCTTAGATCGTGATTTTGCTGCTGGTGCATGGGGCGGAATCGCC TTGCTCGATAGCCAAGCGTTGGCGCGGGTTGCGCAAACGCAACTGGCATAA
Upstream 100 bases:
>100_bases CTCTGTTACTAGCCAATGAGCTAGGCATTGTTCGGGATTAAGTTCCAGCAAACCACCCCCGACAGGCTTAGCCACTTAGT TCCTTGTATAGGGGGTTTGC
Downstream 100 bases:
>100_bases CTCGCCAAGGGATTGGCACAGAATCCCACGGCAAAACCATACCAGTACCACATCGATTTAGGTTGGATTTGGGGAAACCT ACGGGTTATGGGTCACGCAT
Product: ROK family protein
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MDQRQRRNANGWRLGVDVGGTKIATLLVDGDNRVWASVQRPTDTATPDHALKSLADAIWETLKQADLPIRLLAGIGIGIP GQVDTQSGIVRHAVNLGWQAVDLRGFINATFGTACVIENDVRAAALGIQRYWLAGSIDSMLYVSIGTGIAAGMILDGTVY RGSHGMAGEIGHARFGSSTIRCRCGNYGCLEAIVAGPAIANYAHSLLSTFPHSQLHQLDSITTPAVYAAAEAGDDLALAV AHMVGEQLAQALYTMVLAYDCDHIVLGGGVSRAGSAFFAPIEQALDVLRQQSSLATSLLPTGRVKLLDRDFAAGAWGGIA LLDSQALARVAQTQLA
Sequences:
>Translated_336_residues MDQRQRRNANGWRLGVDVGGTKIATLLVDGDNRVWASVQRPTDTATPDHALKSLADAIWETLKQADLPIRLLAGIGIGIP GQVDTQSGIVRHAVNLGWQAVDLRGFINATFGTACVIENDVRAAALGIQRYWLAGSIDSMLYVSIGTGIAAGMILDGTVY RGSHGMAGEIGHARFGSSTIRCRCGNYGCLEAIVAGPAIANYAHSLLSTFPHSQLHQLDSITTPAVYAAAEAGDDLALAV AHMVGEQLAQALYTMVLAYDCDHIVLGGGVSRAGSAFFAPIEQALDVLRQQSSLATSLLPTGRVKLLDRDFAAGAWGGIA LLDSQALARVAQTQLA >Mature_336_residues MDQRQRRNANGWRLGVDVGGTKIATLLVDGDNRVWASVQRPTDTATPDHALKSLADAIWETLKQADLPIRLLAGIGIGIP GQVDTQSGIVRHAVNLGWQAVDLRGFINATFGTACVIENDVRAAALGIQRYWLAGSIDSMLYVSIGTGIAAGMILDGTVY RGSHGMAGEIGHARFGSSTIRCRCGNYGCLEAIVAGPAIANYAHSLLSTFPHSQLHQLDSITTPAVYAAAEAGDDLALAV AHMVGEQLAQALYTMVLAYDCDHIVLGGGVSRAGSAFFAPIEQALDVLRQQSSLATSLLPTGRVKLLDRDFAAGAWGGIA LLDSQALARVAQTQLA
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=198, Percent_Identity=29.7979797979798, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI298566325, Length=198, Percent_Identity=29.7979797979798, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI4885285, Length=198, Percent_Identity=29.7979797979798, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI190014632, Length=198, Percent_Identity=29.7979797979798, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1786891, Length=307, Percent_Identity=28.0130293159609, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1787363, Length=312, Percent_Identity=27.8846153846154, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787878, Length=227, Percent_Identity=29.5154185022026, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI87082127, Length=243, Percent_Identity=24.2798353909465, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI87081733, Length=271, Percent_Identity=25.830258302583, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790522, Length=261, Percent_Identity=24.904214559387, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI87082230, Length=282, Percent_Identity=25.531914893617, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 35371; Mature: 35371
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQRQRRNANGWRLGVDVGGTKIATLLVDGDNRVWASVQRPTDTATPDHALKSLADAIWE CCCHHCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHH TLKQADLPIRLLAGIGIGIPGQVDTQSGIVRHAVNLGWQAVDLRGFINATFGTACVIEND HHHHCCCCEEEEHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHCCCCEEEEEECC VRAAALGIQRYWLAGSIDSMLYVSIGTGIAAGMILDGTVYRGSHGMAGEIGHARFGSSTI HHHHHHHHHHHHECCCCCCEEEEEECCCHHHCEEECCEEEECCCCCCCCCCCCCCCCCEE RCRCGNYGCLEAIVAGPAIANYAHSLLSTFPHSQLHQLDSITTPAVYAAAEAGDDLALAV EEECCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHEEHHCCCCHHHHHH AHMVGEQLAQALYTMVLAYDCDHIVLGGGVSRAGSAFFAPIEQALDVLRQQSSLATSLLP HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC TGRVKLLDRDFAAGAWGGIALLDSQALARVAQTQLA CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDQRQRRNANGWRLGVDVGGTKIATLLVDGDNRVWASVQRPTDTATPDHALKSLADAIWE CCCHHCCCCCCEEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHH TLKQADLPIRLLAGIGIGIPGQVDTQSGIVRHAVNLGWQAVDLRGFINATFGTACVIEND HHHHCCCCEEEEHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHCCCCEEEEEECC VRAAALGIQRYWLAGSIDSMLYVSIGTGIAAGMILDGTVYRGSHGMAGEIGHARFGSSTI HHHHHHHHHHHHECCCCCCEEEEEECCCHHHCEEECCEEEECCCCCCCCCCCCCCCCCEE RCRCGNYGCLEAIVAGPAIANYAHSLLSTFPHSQLHQLDSITTPAVYAAAEAGDDLALAV EEECCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHEEHHCCCCHHHHHH AHMVGEQLAQALYTMVLAYDCDHIVLGGGVSRAGSAFFAPIEQALDVLRQQSSLATSLLP HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC TGRVKLLDRDFAAGAWGGIALLDSQALARVAQTQLA CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]