| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is malA [H]
Identifier: 159897668
GI number: 159897668
Start: 1302340
End: 1303527
Strand: Direct
Name: malA [H]
Synonym: Haur_1139
Alternate gene names: 159897668
Gene position: 1302340-1303527 (Clockwise)
Preceding gene: 159897666
Following gene: 159897669
Centisome position: 20.52
GC content: 50.76
Gene sequence:
>1188_bases ATGGGCAGCCGTTTGGCGCTCTGGCGGTCGAATGCACGTCCCGGGGTTCGGGGTAGTTTGTACTATTTATGTTTTTGGTC AAGCGTTGGGATGTATATTCCATTCATTAATGTATATTTCACCAACCTTGGCTTAAGTGGGCAACAAATAGCCATGTTTG GGGCAATTAGCCCGCTAGCAGTGCTGTTGTTCAACCCATTGGTGGGTGCAACAGCCGATCGACGTGGCTGGCATGTGCAG TTACTCCTAAGCATGTTGGCCTTAACGGGGTTAAGCCAAATTGCCTTGGCATTTCCAACAACCTTCTTTACAATCTTGCC AGTGATGGTCGTTTTGGCAGTGGTACGCGGGCCAATTGCGCCATTGGCTGATAGCATGATCGCAGGCATGGCCGTGCGTC ATCAACTGGCCTATGGCAAATTGCGGCTCTGGGGTTCAGTTGGCTATGCCGTCACCTCATTATTAGGTGGTATTTGGTGG GCCAAAACGGGCTATCCAACCATGTTTATATTGACTGGCTTGATGACTGGCTTGGTCGCGATCGTAGCCAATAGCCTTGA TCATACGCCTGAATTGCGCAAAACTGCTGCCAAATCGGCGAAAGCGCCCCGTGATGCCGCTTTTATCGCAATTGTCGTGA TCACTAGTTTGGTTGGGGCTGCCTTTAGCATGGTTTCAATGTTCGATGGCAACCTGATTCAACGGATCAGTGGGAGCACC ATCATGCTGGGGGTTTTGCCATGTGTCATCGCCAGTACCGAAGTGCCAGTGATGCTCAACGCCGATCGGGTGATCGCTCG CTTTGGCACAGCTAAAACACTAGCCGTTTCAACCTTGATTCTTGGGCTAGGGTTTATTGGCAGCGGCATGGTGAGCGAAG CTTGGATGTTAATTCCAATTGGCATGTTTCGGGCTTGTGGATTTGGCTTGTACTCGGTGGCGATCATTCGCCTAATTACC GAGCGCATTCCAACCACCTTGCTGGCAACCGCGCAAGGCTTGATCAGTGCGATTGCTGGTGGTTTGTCGCCGTTGTTGGC TACCCAAGCGGGTGGCTATATGTTCGATATATCAGGGCCACAATTGGTCTTTATTGCATCAGGCTTGTGCATTGGCTTGG CAACCTTGGTCGTTTGGCTAGGCTTAAAACTGAATTGGTTCAAACCAATCGCGCAAACCAACGCCTAA
Upstream 100 bases:
>100_bases GCAGGCGTAGCACTCGCCAGCTTTGTTGTATGCGCAAAATACCCAGCATGGCTTCCTTTCACTCGTTGGCATATTGTTGG AATCTATGAGGAGTCAGCGT
Downstream 100 bases:
>100_bases ATTCGCTATGTGATTTACTCGCAGCACCACCCATCAACGGGTGGTGCTGTTTTGATGTTAACCAAACTTGACAGCAACCA CCGCATTGCGTAGAGTGGCA
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MGSRLALWRSNARPGVRGSLYYLCFWSSVGMYIPFINVYFTNLGLSGQQIAMFGAISPLAVLLFNPLVGATADRRGWHVQ LLLSMLALTGLSQIALAFPTTFFTILPVMVVLAVVRGPIAPLADSMIAGMAVRHQLAYGKLRLWGSVGYAVTSLLGGIWW AKTGYPTMFILTGLMTGLVAIVANSLDHTPELRKTAAKSAKAPRDAAFIAIVVITSLVGAAFSMVSMFDGNLIQRISGST IMLGVLPCVIASTEVPVMLNADRVIARFGTAKTLAVSTLILGLGFIGSGMVSEAWMLIPIGMFRACGFGLYSVAIIRLIT ERIPTTLLATAQGLISAIAGGLSPLLATQAGGYMFDISGPQLVFIASGLCIGLATLVVWLGLKLNWFKPIAQTNA
Sequences:
>Translated_395_residues MGSRLALWRSNARPGVRGSLYYLCFWSSVGMYIPFINVYFTNLGLSGQQIAMFGAISPLAVLLFNPLVGATADRRGWHVQ LLLSMLALTGLSQIALAFPTTFFTILPVMVVLAVVRGPIAPLADSMIAGMAVRHQLAYGKLRLWGSVGYAVTSLLGGIWW AKTGYPTMFILTGLMTGLVAIVANSLDHTPELRKTAAKSAKAPRDAAFIAIVVITSLVGAAFSMVSMFDGNLIQRISGST IMLGVLPCVIASTEVPVMLNADRVIARFGTAKTLAVSTLILGLGFIGSGMVSEAWMLIPIGMFRACGFGLYSVAIIRLIT ERIPTTLLATAQGLISAIAGGLSPLLATQAGGYMFDISGPQLVFIASGLCIGLATLVVWLGLKLNWFKPIAQTNA >Mature_394_residues GSRLALWRSNARPGVRGSLYYLCFWSSVGMYIPFINVYFTNLGLSGQQIAMFGAISPLAVLLFNPLVGATADRRGWHVQL LLSMLALTGLSQIALAFPTTFFTILPVMVVLAVVRGPIAPLADSMIAGMAVRHQLAYGKLRLWGSVGYAVTSLLGGIWWA KTGYPTMFILTGLMTGLVAIVANSLDHTPELRKTAAKSAKAPRDAAFIAIVVITSLVGAAFSMVSMFDGNLIQRISGSTI MLGVLPCVIASTEVPVMLNADRVIARFGTAKTLAVSTLILGLGFIGSGMVSEAWMLIPIGMFRACGFGLYSVAIIRLITE RIPTTLLATAQGLISAIAGGLSPLLATQAGGYMFDISGPQLVFIASGLCIGLATLVVWLGLKLNWFKPIAQTNA
Specific function: High affinity transport of maltose [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004750 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41851; Mature: 41719
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSRLALWRSNARPGVRGSLYYLCFWSSVGMYIPFINVYFTNLGLSGQQIAMFGAISPLA CCCCEEEEECCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLLFNPLVGATADRRGWHVQLLLSMLALTGLSQIALAFPTTFFTILPVMVVLAVVRGPIA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH PLADSMIAGMAVRHQLAYGKLRLWGSVGYAVTSLLGGIWWAKTGYPTMFILTGLMTGLVA HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IVANSLDHTPELRKTAAKSAKAPRDAAFIAIVVITSLVGAAFSMVSMFDGNLIQRISGST HHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC IMLGVLPCVIASTEVPVMLNADRVIARFGTAKTLAVSTLILGLGFIGSGMVSEAWMLIPI HHHHHHHHHHHCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GMFRACGFGLYSVAIIRLITERIPTTLLATAQGLISAIAGGLSPLLATQAGGYMFDISGP HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC QLVFIASGLCIGLATLVVWLGLKLNWFKPIAQTNA EEEEECCCHHHHHHHHHHHHCCCCHHHCCHHCCCC >Mature Secondary Structure GSRLALWRSNARPGVRGSLYYLCFWSSVGMYIPFINVYFTNLGLSGQQIAMFGAISPLA CCCEEEEECCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VLLFNPLVGATADRRGWHVQLLLSMLALTGLSQIALAFPTTFFTILPVMVVLAVVRGPIA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH PLADSMIAGMAVRHQLAYGKLRLWGSVGYAVTSLLGGIWWAKTGYPTMFILTGLMTGLVA HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IVANSLDHTPELRKTAAKSAKAPRDAAFIAIVVITSLVGAAFSMVSMFDGNLIQRISGST HHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC IMLGVLPCVIASTEVPVMLNADRVIARFGTAKTLAVSTLILGLGFIGSGMVSEAWMLIPI HHHHHHHHHHHCCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GMFRACGFGLYSVAIIRLITERIPTTLLATAQGLISAIAGGLSPLLATQAGGYMFDISGP HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC QLVFIASGLCIGLATLVVWLGLKLNWFKPIAQTNA EEEEECCCHHHHHHHHHHHHCCCCHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8190087 [H]