| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897666
Identifier: 159897666
GI number: 159897666
Start: 1299927
End: 1300808
Strand: Direct
Name: 159897666
Synonym: Haur_1137
Alternate gene names: NA
Gene position: 1299927-1300808 (Clockwise)
Preceding gene: 159897664
Following gene: 159897668
Centisome position: 20.48
GC content: 48.41
Gene sequence:
>882_bases ATGACAACTCAGCGAATCTTAGTCGTTGGTGCTGAAGCAGCACCAAAAACCCAGTTTATTCAGCAAATCTGTGACACCTG GAGCAGCCATGAGCTAGAGCTTTCGAGCATGCCAAGCTCGCAATGCATCGCCATGGATATAGGCCATTTAGACTACGCCG AACAGCGTTCAGTCTGGTATGGCATCCCCGCGAGTGCTAGCCCTGTGTTGCATGACCTCGCGCAAACCGTAACTAGCTGT ATTGTGTTAATCGATTCAATCAACGATAATGCAGCTATGCTCACATTGGCCGACCAAATCCAGCCCTGGATCACTGGCCC TGTCGTTTTGCTTGTATCACAGCAATCCAACTTACCCGACCATCTCCGCAACGCCTTAGATCATTCAAGCCATCACATAG TAGACAGTTACAACATGAATAAACCAGAATCAATCCAACGGATCATGACCGCCTTGGGTGGTACACTTCCCACCGCTAGC TCTATCCAAAAAGAATATATTACTCCCAATCACTTTGATCAATCAGCTAAAGTGCAAGCGCTATTTGAGCAATTAGCCCA CCATAGCACCGATCTGATTGGCGCAGCATTAATCGCTGTTAATGGCGATCTGCTGGTTTCAACCTTGCCCCAAGCGATTA ATGCCGAGCAACTTGCCGCAATCGGTAGCCCATGGCTGCGGATTGCCGATAAAGTTGCGGCTAGTGCCGCCCTAGGACAA ACCGAAGAAAGCATTATTCGGACGGAGCAAGGCTTGTGTCTGATTCGGCCAATTCACAACCATATTTTAATTACGCTGCT GAATCCACACGCCAATCTTGGCCTCTATTGGCTCAATCTTGCTGAAATCGAGCAGCCTTTAACTGAGTTATTGGCTGCCT GA
Upstream 100 bases:
>100_bases GTTAGGAAATTGATATAGACTGTCTACAAACGCTCTTTTTAGCTGCATACTAAATGCAGTTTAGGCTCAACACCAACGAT CATACAGGAGCATCGTAGCC
Downstream 100 bases:
>100_bases TGAACCGCTCGACAAGCGCATCCTGCTAGGAGTATCGCTAGCAGGATGCGGCATTTTTTTAGTTATTGAGTGACGTAGGG CAAAAACGAATAATATTGAG
Product: roadblock/LC7 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTTQRILVVGAEAAPKTQFIQQICDTWSSHELELSSMPSSQCIAMDIGHLDYAEQRSVWYGIPASASPVLHDLAQTVTSC IVLIDSINDNAAMLTLADQIQPWITGPVVLLVSQQSNLPDHLRNALDHSSHHIVDSYNMNKPESIQRIMTALGGTLPTAS SIQKEYITPNHFDQSAKVQALFEQLAHHSTDLIGAALIAVNGDLLVSTLPQAINAEQLAAIGSPWLRIADKVAASAALGQ TEESIIRTEQGLCLIRPIHNHILITLLNPHANLGLYWLNLAEIEQPLTELLAA
Sequences:
>Translated_293_residues MTTQRILVVGAEAAPKTQFIQQICDTWSSHELELSSMPSSQCIAMDIGHLDYAEQRSVWYGIPASASPVLHDLAQTVTSC IVLIDSINDNAAMLTLADQIQPWITGPVVLLVSQQSNLPDHLRNALDHSSHHIVDSYNMNKPESIQRIMTALGGTLPTAS SIQKEYITPNHFDQSAKVQALFEQLAHHSTDLIGAALIAVNGDLLVSTLPQAINAEQLAAIGSPWLRIADKVAASAALGQ TEESIIRTEQGLCLIRPIHNHILITLLNPHANLGLYWLNLAEIEQPLTELLAA >Mature_292_residues TTQRILVVGAEAAPKTQFIQQICDTWSSHELELSSMPSSQCIAMDIGHLDYAEQRSVWYGIPASASPVLHDLAQTVTSCI VLIDSINDNAAMLTLADQIQPWITGPVVLLVSQQSNLPDHLRNALDHSSHHIVDSYNMNKPESIQRIMTALGGTLPTASS IQKEYITPNHFDQSAKVQALFEQLAHHSTDLIGAALIAVNGDLLVSTLPQAINAEQLAAIGSPWLRIADKVAASAALGQT EESIIRTEQGLCLIRPIHNHILITLLNPHANLGLYWLNLAEIEQPLTELLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31857; Mature: 31726
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQRILVVGAEAAPKTQFIQQICDTWSSHELELSSMPSSQCIAMDIGHLDYAEQRSVWY CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCHHHCCEEE GIPASASPVLHDLAQTVTSCIVLIDSINDNAAMLTLADQIQPWITGPVVLLVSQQSNLPD ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCEEEEEECCCCCHH HLRNALDHSSHHIVDSYNMNKPESIQRIMTALGGTLPTASSIQKEYITPNHFDQSAKVQA HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHH LFEQLAHHSTDLIGAALIAVNGDLLVSTLPQAINAEQLAAIGSPWLRIADKVAASAALGQ HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHCC TEESIIRTEQGLCLIRPIHNHILITLLNPHANLGLYWLNLAEIEQPLTELLAA CHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCC >Mature Secondary Structure TTQRILVVGAEAAPKTQFIQQICDTWSSHELELSSMPSSQCIAMDIGHLDYAEQRSVWY CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCHHHCCEEE GIPASASPVLHDLAQTVTSCIVLIDSINDNAAMLTLADQIQPWITGPVVLLVSQQSNLPD ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCEEEEEECCCCCHH HLRNALDHSSHHIVDSYNMNKPESIQRIMTALGGTLPTASSIQKEYITPNHFDQSAKVQA HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHH LFEQLAHHSTDLIGAALIAVNGDLLVSTLPQAINAEQLAAIGSPWLRIADKVAASAALGQ HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHCC TEESIIRTEQGLCLIRPIHNHILITLLNPHANLGLYWLNLAEIEQPLTELLAA CHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA