| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897661
Identifier: 159897661
GI number: 159897661
Start: 1294959
End: 1295621
Strand: Direct
Name: 159897661
Synonym: Haur_1132
Alternate gene names: NA
Gene position: 1294959-1295621 (Clockwise)
Preceding gene: 159897660
Following gene: 159897662
Centisome position: 20.4
GC content: 53.7
Gene sequence:
>663_bases ATGAGCTTTACCATAACCTCACTCAATACCCCGTTTGGGCTGGCGATGTTTGCCACCAAAAGCAGCGCTGGCGGCTCCTT GGCAATTCTGCTTGATGAACCAAATCCGCATGCCGCAATTTATGCCGCTAAATCCCAAGGGGTCACTTGGATCATCGAAG CGGTCAGCATGCTGCCGTGCGATGGCTTGCTGCAACCTGATGATATCTTAATTCCAGACCAACTGGTGGATTTGACCCAG CAACGGTCATCGACCTTCTTTCGCAATCGCGGCTATGGCTTTATTGGCCAGAACTCGGTTTGGTGTCCCGATTTGCGAGC TAGTTTATTAACCGCCGCCCAAAGCATCAGCCAACGGGTGTTTAGTCGTGGTACACTGGCGGTTGGCGAGGCCGACACCA CGCTTGAGGCTGCCCAAACTTGGCAAGCCCATGGCCTGAGTCGCAGCGCAGCACCAGCGGCCTACCTCGCGAAAGAATTA GAATTATGTTACGCTGTTGTCGGAATTGTCGGCACAGCCGCCAGTAAACTTGGCAATACATTAATTGCAAGCGTTGCACA ACATTTGCCCACAGCACCAACCTGTGCCTGCCGCCAGACCATGCAATCTGCGCGGGATCGTGGCTTGGTTGGCGACGATT GGCGTACATGGATTGGGGAATAA
Upstream 100 bases:
>100_bases GCGCACCACGTTTCTTTGGAGTCGAAGTCGCCCAAACTTGTCTGCAAATTGTGCTAGCGACTGCCGAGCAATTGTTGGCA ACTAACGAGGTGAGCACCCA
Downstream 100 bases:
>100_bases ACACATGACACTCGTTTTACGCAACAGCACACAAATCGAAAAAATGCGCAATGCAGGCCGTTTGGTTGCCCAAACCCATG CCATGCTGCGCGAATATGTT
Product: methylthioadenosine phosphorylase
Products: NA
Alternate protein names: 5-Methylthioadenosine Phosphorylase; 5-Methylthioadenosine Phosphorylase II; Purine-Nucleoside Phosphorylase; S-Methyl-5-Thioadenosine Phosphorylase
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSFTITSLNTPFGLAMFATKSSAGGSLAILLDEPNPHAAIYAAKSQGVTWIIEAVSMLPCDGLLQPDDILIPDQLVDLTQ QRSSTFFRNRGYGFIGQNSVWCPDLRASLLTAAQSISQRVFSRGTLAVGEADTTLEAAQTWQAHGLSRSAAPAAYLAKEL ELCYAVVGIVGTAASKLGNTLIASVAQHLPTAPTCACRQTMQSARDRGLVGDDWRTWIGE
Sequences:
>Translated_220_residues MSFTITSLNTPFGLAMFATKSSAGGSLAILLDEPNPHAAIYAAKSQGVTWIIEAVSMLPCDGLLQPDDILIPDQLVDLTQ QRSSTFFRNRGYGFIGQNSVWCPDLRASLLTAAQSISQRVFSRGTLAVGEADTTLEAAQTWQAHGLSRSAAPAAYLAKEL ELCYAVVGIVGTAASKLGNTLIASVAQHLPTAPTCACRQTMQSARDRGLVGDDWRTWIGE >Mature_219_residues SFTITSLNTPFGLAMFATKSSAGGSLAILLDEPNPHAAIYAAKSQGVTWIIEAVSMLPCDGLLQPDDILIPDQLVDLTQQ RSSTFFRNRGYGFIGQNSVWCPDLRASLLTAAQSISQRVFSRGTLAVGEADTTLEAAQTWQAHGLSRSAAPAAYLAKELE LCYAVVGIVGTAASKLGNTLIASVAQHLPTAPTCACRQTMQSARDRGLVGDDWRTWIGE
Specific function: Unknown
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47132622, Length=156, Percent_Identity=29.4871794871795, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23433; Mature: 23302
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTITSLNTPFGLAMFATKSSAGGSLAILLDEPNPHAAIYAAKSQGVTWIIEAVSMLPC CCEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCC DGLLQPDDILIPDQLVDLTQQRSSTFFRNRGYGFIGQNSVWCPDLRASLLTAAQSISQRV CCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FSRGTLAVGEADTTLEAAQTWQAHGLSRSAAPAAYLAKELELCYAVVGIVGTAASKLGNT HHCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIASVAQHLPTAPTCACRQTMQSARDRGLVGDDWRTWIGE HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCC >Mature Secondary Structure SFTITSLNTPFGLAMFATKSSAGGSLAILLDEPNPHAAIYAAKSQGVTWIIEAVSMLPC CEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCC DGLLQPDDILIPDQLVDLTQQRSSTFFRNRGYGFIGQNSVWCPDLRASLLTAAQSISQRV CCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FSRGTLAVGEADTTLEAAQTWQAHGLSRSAAPAAYLAKELELCYAVVGIVGTAASKLGNT HHCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIASVAQHLPTAPTCACRQTMQSARDRGLVGDDWRTWIGE HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA