Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897599

Identifier: 159897599

GI number: 159897599

Start: 1222132

End: 1222701

Strand: Direct

Name: 159897599

Synonym: Haur_1070

Alternate gene names: NA

Gene position: 1222132-1222701 (Clockwise)

Preceding gene: 159897598

Following gene: 159897600

Centisome position: 19.26

GC content: 56.32

Gene sequence:

>570_bases
ATGCGAAAGCTCGTGCCCATCATCCTGATCGCTATCCTGCTCAGTGGATGTACCATGCCCGCCACGACACCGCCGCGCGA
CCTGCCAACTACGGTCGTTACTACTGCGCCGATCCGCATGGCTGACACGATTCCATCCGCAACAGCGGTTCCCTCCGCAG
TACCAGCCCCAACGCCGACGTGGGATGAATCTGAATCTGAATACGCTGGGTGTGAAACGGTGTCCGAAACGCTTCCAATC
TACCCCCAGCGGCTGCTCTATCCCGACTATCGTGATCTCAGCCAGACTATCACGACGAGCGAATTGCCGCTGGTGCGACA
TACGACTTATCGAAGTTCCGCAGCAGCAGACACCATCTTGGCATGGTATCGCGAACAGGCTCGTGCCGCCTTCTGGAAGG
AAATCAGCGTAACCACAACGACCATCAAGTATGACTATGGGGCAATTGGTATGTGTGGGCCCGTTTTTGCCATAACCATC
GCTGTCACGGGCGATGCAGAGGGATCGATGGTCGCCTTCACTCGTGAATTTTCCGGCCCATTTTCTCCGCTGGACTGGCC
CAGTGATTAA

Upstream 100 bases:

>100_bases
AAGCGTGGTGGGGATTGTTGCGATCAACCCGGTGCTGGAACTAGGTCATTCGCTAGGACGTTCTGCCTTCTGAGACCATC
AACTCGCAAAGGATTTCTGT

Downstream 100 bases:

>100_bases
GGTGAGCGCTGCGTGGATGCTGGTGTGACAATGGCAACCACGCTGAAAAAGACTTTTGTAAAACGTAGGCAGCCTGATGA
TTGAGCGATTAGACTGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPTWDESESEYAGCETVSETLPI
YPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTILAWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITI
AVTGDAEGSMVAFTREFSGPFSPLDWPSD

Sequences:

>Translated_189_residues
MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPTWDESESEYAGCETVSETLPI
YPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTILAWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITI
AVTGDAEGSMVAFTREFSGPFSPLDWPSD
>Mature_189_residues
MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPTWDESESEYAGCETVSETLPI
YPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTILAWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITI
AVTGDAEGSMVAFTREFSGPFSPLDWPSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20555; Mature: 20555

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPT
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEHHHCCCCCCCCCCCCCCCCCC
WDESESEYAGCETVSETLPIYPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTIL
CCCCCCCCCCHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
AWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITIAVTGDAEGSMVAFTREFSGP
HHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCC
FSPLDWPSD
CCCCCCCCC
>Mature Secondary Structure
MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPT
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEHHHCCCCCCCCCCCCCCCCCC
WDESESEYAGCETVSETLPIYPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTIL
CCCCCCCCCCHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
AWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITIAVTGDAEGSMVAFTREFSGP
HHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCC
FSPLDWPSD
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA