Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897599
Identifier: 159897599
GI number: 159897599
Start: 1222132
End: 1222701
Strand: Direct
Name: 159897599
Synonym: Haur_1070
Alternate gene names: NA
Gene position: 1222132-1222701 (Clockwise)
Preceding gene: 159897598
Following gene: 159897600
Centisome position: 19.26
GC content: 56.32
Gene sequence:
>570_bases ATGCGAAAGCTCGTGCCCATCATCCTGATCGCTATCCTGCTCAGTGGATGTACCATGCCCGCCACGACACCGCCGCGCGA CCTGCCAACTACGGTCGTTACTACTGCGCCGATCCGCATGGCTGACACGATTCCATCCGCAACAGCGGTTCCCTCCGCAG TACCAGCCCCAACGCCGACGTGGGATGAATCTGAATCTGAATACGCTGGGTGTGAAACGGTGTCCGAAACGCTTCCAATC TACCCCCAGCGGCTGCTCTATCCCGACTATCGTGATCTCAGCCAGACTATCACGACGAGCGAATTGCCGCTGGTGCGACA TACGACTTATCGAAGTTCCGCAGCAGCAGACACCATCTTGGCATGGTATCGCGAACAGGCTCGTGCCGCCTTCTGGAAGG AAATCAGCGTAACCACAACGACCATCAAGTATGACTATGGGGCAATTGGTATGTGTGGGCCCGTTTTTGCCATAACCATC GCTGTCACGGGCGATGCAGAGGGATCGATGGTCGCCTTCACTCGTGAATTTTCCGGCCCATTTTCTCCGCTGGACTGGCC CAGTGATTAA
Upstream 100 bases:
>100_bases AAGCGTGGTGGGGATTGTTGCGATCAACCCGGTGCTGGAACTAGGTCATTCGCTAGGACGTTCTGCCTTCTGAGACCATC AACTCGCAAAGGATTTCTGT
Downstream 100 bases:
>100_bases GGTGAGCGCTGCGTGGATGCTGGTGTGACAATGGCAACCACGCTGAAAAAGACTTTTGTAAAACGTAGGCAGCCTGATGA TTGAGCGATTAGACTGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPTWDESESEYAGCETVSETLPI YPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTILAWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITI AVTGDAEGSMVAFTREFSGPFSPLDWPSD
Sequences:
>Translated_189_residues MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPTWDESESEYAGCETVSETLPI YPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTILAWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITI AVTGDAEGSMVAFTREFSGPFSPLDWPSD >Mature_189_residues MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPTWDESESEYAGCETVSETLPI YPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTILAWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITI AVTGDAEGSMVAFTREFSGPFSPLDWPSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20555; Mature: 20555
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEHHHCCCCCCCCCCCCCCCCCC WDESESEYAGCETVSETLPIYPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTIL CCCCCCCCCCHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH AWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITIAVTGDAEGSMVAFTREFSGP HHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCC FSPLDWPSD CCCCCCCCC >Mature Secondary Structure MRKLVPIILIAILLSGCTMPATTPPRDLPTTVVTTAPIRMADTIPSATAVPSAVPAPTPT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEHHHCCCCCCCCCCCCCCCCCC WDESESEYAGCETVSETLPIYPQRLLYPDYRDLSQTITTSELPLVRHTTYRSSAAADTIL CCCCCCCCCCHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH AWYREQARAAFWKEISVTTTTIKYDYGAIGMCGPVFAITIAVTGDAEGSMVAFTREFSGP HHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCC FSPLDWPSD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA