Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is sfsA [H]
Identifier: 159897598
GI number: 159897598
Start: 1221009
End: 1221755
Strand: Direct
Name: sfsA [H]
Synonym: Haur_1069
Alternate gene names: 159897598
Gene position: 1221009-1221755 (Clockwise)
Preceding gene: 159897593
Following gene: 159897599
Centisome position: 19.24
GC content: 55.69
Gene sequence:
>747_bases GTGGAAACAACGATTCAAATTGGCTTAGTTGGTGGTGCGCCGCTGGTGCAAGCCACTTTTTTGGAGCGGCCAAATCGTTT TTTGGTGCTGGCTCAATTGGCCGATGGCGCGATTGTTCAGGCACATTTAGCTGATCGAGGCCGTTTGTTGACCAAACTCG TGCCAGCAGCGCAGCTGGTGCTCGGCCACAAACCAGCTGAAGGCCGCAAAACTGCCTATCAAGTGGCCGGAGTGTATCAG GCCAACGAGCTAGTTTCATTAGATACAGGCTTGCCAAATCGTTTGGTTGAGGCGGCATTGCGAGCGCAAGCCCTAGCGCC GTTTGCCGAATATCGCCATGTTGAGCGTGAAGTCAAGCTTGGGGCAAGCCGCTTTGATTTTGGTTTAGCTCCGGCTCCAC CCACCAAGGCCAAACGTCATGGCGGTGAGTGCCCATGGCTGGTCGAGGTGAAAAGCGTTGGCGATGCTGAGCATGGCTTG GCGTTATTTCCGGATGCGCCAACCGTGCGTGGGCGACGGCATTTGCTCGAATTGGCTGAATTGCATGAACAAGGGCGGCG CACCGCCGTAATTTTTATTGTGCAACGTGGCGATGCCCAGCGGGTTGCCGTCAACCGCCACGTTGATCCAGCCTTTGCTG AAAGCTTGGCCGCAGTCGCTGCCCGTGGCGTTGAAATTTATGCCTATCGTTGCCCCTTGAGCCTTGCTGGCATTCGCTTG GCCGAGCAATTGCCGGTTGAATTGTAG
Upstream 100 bases:
>100_bases CAGTTTTTATCGGTTAGTAACGACCGCAAGCCATTGTACCACGCTGTACCAAGCTGATTAAGGCTATAATGGCCTTCGTT TTTTAGCGATAAGGGCGATT
Downstream 100 bases:
>100_bases AATTTGGGGACTGGTTGTTGGGGATTGGGGTTCAGTTTTTAACGCAGAGGCGCAGAGAATATGAGGCTATTAGTTGAAGG CTCCAGGCTATTGGTTTTCC
Product: sugar fermentation stimulation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLVLGHKPAEGRKTAYQVAGVYQ ANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKLGASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGL ALFPDAPTVRGRRHLLELAELHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL AEQLPVEL
Sequences:
>Translated_248_residues METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLVLGHKPAEGRKTAYQVAGVYQ ANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKLGASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGL ALFPDAPTVRGRRHLLELAELHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL AEQLPVEL >Mature_248_residues METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLVLGHKPAEGRKTAYQVAGVYQ ANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKLGASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGL ALFPDAPTVRGRRHLLELAELHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL AEQLPVEL
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=239, Percent_Identity=32.2175732217573, Blast_Score=110, Evalue=9e-26,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 26825; Mature: 26825
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLV CCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHH LGHKPAEGRKTAYQVAGVYQANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKL HCCCCCCCCHHHHHHHEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGLALFPDAPTVRGRRHLLELAE CCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHH LHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL HHHCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHH AEQLPVEL HHHCCCCC >Mature Secondary Structure METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLV CCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHH LGHKPAEGRKTAYQVAGVYQANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKL HCCCCCCCCHHHHHHHEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGLALFPDAPTVRGRRHLLELAE CCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHH LHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL HHHCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHH AEQLPVEL HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA