Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is sfsA [H]

Identifier: 159897598

GI number: 159897598

Start: 1221009

End: 1221755

Strand: Direct

Name: sfsA [H]

Synonym: Haur_1069

Alternate gene names: 159897598

Gene position: 1221009-1221755 (Clockwise)

Preceding gene: 159897593

Following gene: 159897599

Centisome position: 19.24

GC content: 55.69

Gene sequence:

>747_bases
GTGGAAACAACGATTCAAATTGGCTTAGTTGGTGGTGCGCCGCTGGTGCAAGCCACTTTTTTGGAGCGGCCAAATCGTTT
TTTGGTGCTGGCTCAATTGGCCGATGGCGCGATTGTTCAGGCACATTTAGCTGATCGAGGCCGTTTGTTGACCAAACTCG
TGCCAGCAGCGCAGCTGGTGCTCGGCCACAAACCAGCTGAAGGCCGCAAAACTGCCTATCAAGTGGCCGGAGTGTATCAG
GCCAACGAGCTAGTTTCATTAGATACAGGCTTGCCAAATCGTTTGGTTGAGGCGGCATTGCGAGCGCAAGCCCTAGCGCC
GTTTGCCGAATATCGCCATGTTGAGCGTGAAGTCAAGCTTGGGGCAAGCCGCTTTGATTTTGGTTTAGCTCCGGCTCCAC
CCACCAAGGCCAAACGTCATGGCGGTGAGTGCCCATGGCTGGTCGAGGTGAAAAGCGTTGGCGATGCTGAGCATGGCTTG
GCGTTATTTCCGGATGCGCCAACCGTGCGTGGGCGACGGCATTTGCTCGAATTGGCTGAATTGCATGAACAAGGGCGGCG
CACCGCCGTAATTTTTATTGTGCAACGTGGCGATGCCCAGCGGGTTGCCGTCAACCGCCACGTTGATCCAGCCTTTGCTG
AAAGCTTGGCCGCAGTCGCTGCCCGTGGCGTTGAAATTTATGCCTATCGTTGCCCCTTGAGCCTTGCTGGCATTCGCTTG
GCCGAGCAATTGCCGGTTGAATTGTAG

Upstream 100 bases:

>100_bases
CAGTTTTTATCGGTTAGTAACGACCGCAAGCCATTGTACCACGCTGTACCAAGCTGATTAAGGCTATAATGGCCTTCGTT
TTTTAGCGATAAGGGCGATT

Downstream 100 bases:

>100_bases
AATTTGGGGACTGGTTGTTGGGGATTGGGGTTCAGTTTTTAACGCAGAGGCGCAGAGAATATGAGGCTATTAGTTGAAGG
CTCCAGGCTATTGGTTTTCC

Product: sugar fermentation stimulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLVLGHKPAEGRKTAYQVAGVYQ
ANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKLGASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGL
ALFPDAPTVRGRRHLLELAELHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL
AEQLPVEL

Sequences:

>Translated_248_residues
METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLVLGHKPAEGRKTAYQVAGVYQ
ANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKLGASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGL
ALFPDAPTVRGRRHLLELAELHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL
AEQLPVEL
>Mature_248_residues
METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLVLGHKPAEGRKTAYQVAGVYQ
ANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKLGASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGL
ALFPDAPTVRGRRHLLELAELHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL
AEQLPVEL

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family [H]

Homologues:

Organism=Escherichia coli, GI1786340, Length=239, Percent_Identity=32.2175732217573, Blast_Score=110, Evalue=9e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005224 [H]

Pfam domain/function: PF03749 SfsA [H]

EC number: NA

Molecular weight: Translated: 26825; Mature: 26825

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLV
CCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHH
LGHKPAEGRKTAYQVAGVYQANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKL
HCCCCCCCCHHHHHHHEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGLALFPDAPTVRGRRHLLELAE
CCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHH
LHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL
HHHCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHH
AEQLPVEL
HHHCCCCC
>Mature Secondary Structure
METTIQIGLVGGAPLVQATFLERPNRFLVLAQLADGAIVQAHLADRGRLLTKLVPAAQLV
CCCEEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHH
LGHKPAEGRKTAYQVAGVYQANELVSLDTGLPNRLVEAALRAQALAPFAEYRHVEREVKL
HCCCCCCCCHHHHHHHEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASRFDFGLAPAPPTKAKRHGGECPWLVEVKSVGDAEHGLALFPDAPTVRGRRHLLELAE
CCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHH
LHEQGRRTAVIFIVQRGDAQRVAVNRHVDPAFAESLAAVAARGVEIYAYRCPLSLAGIRL
HHHCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHH
AEQLPVEL
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA