Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897577
Identifier: 159897577
GI number: 159897577
Start: 1196371
End: 1197825
Strand: Reverse
Name: 159897577
Synonym: Haur_1048
Alternate gene names: NA
Gene position: 1197825-1196371 (Counterclockwise)
Preceding gene: 159897580
Following gene: 159897576
Centisome position: 18.87
GC content: 48.93
Gene sequence:
>1455_bases ATGCGATGGTTTAGAGTGTTGTTTGTGCTATTGATTGTAGCAGGATTTGGCCTGACATGGTATCTTTTGCAGCCTCAAAA TAGCTTGGTTTGGCAAACATTCACCCCTACGGTTATCCCGCTGGAACAGGCTGAGTTGGCCAATCCTGGGCGTGGGCTAT ATCAATGGCGTGGCCAAACCATGATCTGTCCTAGCGAGTTGATTTCGAATCGCGAACGCTATGATCGCTGGACATGGGCC GAACTTGAGCCAAACGAAAATCAATACGATTGGCAAGAAATTCATCAATTACTGGATATGGCTGAGCAGAACGGCCAGCG GGTTTGGCTCGGTTTGGGGGCAAGTGCTGGCCCAAGTAATAATGGCCCGTTTTTACCAATTTACTTGCAGAAACCTGAAT TTGGCGCAAACTTTGAAGGCGATTGGTATCCAAATTACAATCATCCTTTTGTGCAAAACCGCCTCGAAGCCTTGTTGGCA GCCTTTGTGGCCGAATTTGCGGGCGATCAGCGGATTTTGGGCGTGCAGATGCGCAGTTATGGCCGTTATGGCGAGGGCTA TTTGCCATGGAACGCCGATAAAAGCCATGGAATGTGGGCCAGCGAAAGTACGGCCCGCTGGCTGGTTGATGCTTGGCATA CCCGACTCAGCCCGCATTTTCTGATTTCAATTCCGCTGAGTAATAATCCAGTGTTTTACTATGCCATGACCAAGCAACCC TATTGGAGCATTACCCGTGATGCCTTGGGCATGCCTGAACAAATGGGTAATATTGATCAACTCATTCAAAGTGATATTAC GGTTGATGGCCAAGCAATTGGCCCGTTGGTGGCTGAGCGTTGGAAAGTAGCGCCGATGTTTAGCGAGATGATCGGTGAAT ATGGTGAGCGCGATTATAGTGGCCAGTTTTTGGCAGCCCAAACCCAAGTGATTTCATATCATATTTCGTATGTGAGCAAC GGCAATTTTGCCCAGCCCTATCGCGCAAGCCCGTGGGATTTCTGGCGTGATCCAATTAATTGTCCTGAGCAAGCCAGCAA TTGGAGTAATGCCGATATTGAGAATTTTATGCTGGCGGGCAAATTAGCCGGTTATCGCTATGCCCCAACCACGATCAAAC TCGCCATCGATAACCAGCAGCTCCAGATCGAAAGTAGCTGGCAAAACGCTGGAGTTGCCCCGATATATGAGCGTTGGCCG TTGGTATGGCAATTACGCGATGCTACTCAGACTGTGGTTTGGCAAGGCGAATCAAGCCTTGATTTACGCCAACTTTTGCC AGCCCAAGCCTATGAGCATCGCCAACAATTTGAACAATTCAAGCTGCCAGCGGGTGAGTATGAATTGCGATTGGTTGCTC CAGCGATCAATCGCTATGTACGGCCTTTGCAATTGGCAATTGAAGGCCAGCTGGATGATGGGGCATATCGGATTGGAATT CTGAGCATTCGTTAA
Upstream 100 bases:
>100_bases ACAGCAAGAATGGTTGGCATGGAAACCCTTCATAACAATGGTAGTGTGATCGATCAGCTTCAACGATGGGATAACCGCGA TCGGTACAAAGGATTGGGCA
Downstream 100 bases:
>100_bases TATCTAATTCTGGGGCTAATTGCAAAATCGTGGCACAATACAAACACGCCAATAGTTGGCACGATTGGCTTGATCTCACG CTTGCGACGGTTGCGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQTMICPSELISNRERYDRWTWA ELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSNNGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLA AFVAEFAGDQRILGVQMRSYGRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYSGQFLAAQTQVISYHISYVSN GNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAGKLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWP LVWQLRDATQTVVWQGESSLDLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI LSIR
Sequences:
>Translated_484_residues MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQTMICPSELISNRERYDRWTWA ELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSNNGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLA AFVAEFAGDQRILGVQMRSYGRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYSGQFLAAQTQVISYHISYVSN GNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAGKLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWP LVWQLRDATQTVVWQGESSLDLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI LSIR >Mature_484_residues MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQTMICPSELISNRERYDRWTWA ELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSNNGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLA AFVAEFAGDQRILGVQMRSYGRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYSGQFLAAQTQVISYHISYVSN GNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAGKLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWP LVWQLRDATQTVVWQGESSLDLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI LSIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55737; Mature: 55737
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQT CHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCEEEECCHHHCCCCCCCCEEECCCE MICPSELISNRERYDRWTWAELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSN EECHHHHHCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC NGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLAAFVAEFAGDQRILGVQMRSY CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHC GRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCC YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYS CCHHHHHHCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCC GQFLAAQTQVISYHISYVSNGNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAG CCEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCCCHHHHEEEH KLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWPLVWQLRDATQTVVWQGESSL HHCCCEECCEEEEEEECCCEEEEECCCCCCCCCCHHHCCCEEEEECCCCEEEEECCCCCC DLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCEEEEEEECCCCCCEEEEEE LSIR EEEC >Mature Secondary Structure MRWFRVLFVLLIVAGFGLTWYLLQPQNSLVWQTFTPTVIPLEQAELANPGRGLYQWRGQT CHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCEEEECCHHHCCCCCCCCEEECCCE MICPSELISNRERYDRWTWAELEPNENQYDWQEIHQLLDMAEQNGQRVWLGLGASAGPSN EECHHHHHCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC NGPFLPIYLQKPEFGANFEGDWYPNYNHPFVQNRLEALLAAFVAEFAGDQRILGVQMRSY CCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHC GRYGEGYLPWNADKSHGMWASESTARWLVDAWHTRLSPHFLISIPLSNNPVFYYAMTKQP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCC YWSITRDALGMPEQMGNIDQLIQSDITVDGQAIGPLVAERWKVAPMFSEMIGEYGERDYS CCHHHHHHCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCC GQFLAAQTQVISYHISYVSNGNFAQPYRASPWDFWRDPINCPEQASNWSNADIENFMLAG CCEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCCCHHHHEEEH KLAGYRYAPTTIKLAIDNQQLQIESSWQNAGVAPIYERWPLVWQLRDATQTVVWQGESSL HHCCCEECCEEEEEEECCCEEEEECCCCCCCCCCHHHCCCEEEEECCCCEEEEECCCCCC DLRQLLPAQAYEHRQQFEQFKLPAGEYELRLVAPAINRYVRPLQLAIEGQLDDGAYRIGI CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCEEEEEEECCCCCCEEEEEE LSIR EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA