Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897561
Identifier: 159897561
GI number: 159897561
Start: 1177640
End: 1178881
Strand: Reverse
Name: 159897561
Synonym: Haur_1032
Alternate gene names: NA
Gene position: 1178881-1177640 (Counterclockwise)
Preceding gene: 159897562
Following gene: 159897560
Centisome position: 18.58
GC content: 51.85
Gene sequence:
>1242_bases ATGCAACCATTAAAGATTCTGGTGTTGACCAGCTTATTTCCACCGCACTATATCGGTGGCTACGAGGTTGGTTGTGGCGA TGTGGTTGCTGGTTTACGCGCCAAAGGCCACGATGTAACGGTGCTAACCAGCACCTACGGCGTGGATCGCGAAGTGCGCG AAGGCTTTATCGAGCGTTCGCTGACGATCGATATTCACCCCGTGGCTCAAACTACTTTAGCCCACCAACGCCGTTTATAC GAACGTGAACTCCACAATCAGCCACGCATTTTAGCACTTGCCGAAGCGCTAAAACCCGATATTGTGTTTGTTTGGAGTTT CTACCAAGCCTCGATGTCGGCAGTGCGTATGCTCCAAGCACGCGGCTATCGCACAGTCTTTTTCATCTCCGATCATTGGC CAATTCGGATTGGAATTTTCGATCCATGGCACTATATGCCGCGCCATCCTGTGCGTTGGCTTGGGCGCAAACTGCTTGGC CGAAAGCTTGGGCGCAAAACTGGTTTTCGCAATCATTTGCCATTGAGCTATGCCAATGCAATTTTTGCTAGCGACTTTTT GCTCAAGCAAACCCAACCCATCGGCTCCATGCCCAATGCTCAAGTGATTCGCTGGGGTGTTGATTACGATTTGTTTGTGC GCCGTGAACGATCAGCTAGCATGGGCCAGCGCTTATTGTTTGTTGGTCAAATTTCCGGCCACAAAGGCATGGAAACCTTA CTTGAGGCCTTTGCCTTGGTGCAACAAAAGCATGGCTTTGAACAAGCGACGCTCTCGATTGTTGGGGCTGGGCTTTCCGC TGAATATACCAGCGAGATGCAGCGCTACGCCGAAACCCTTGGTATCAGCCAAAGCGTTGCTTGGCGGGGCAAATTGCCGC GCCAAGCACTACCCGACATCTACGCCAGCCACGATATTTTGATCTTCCCATCACGTTGGGATGAGCCATTTAGCATTACT GTCGTTGAGGCGCTGGCAATGGGGTTGGTGGTAGTGGCCTCGGATACTGGCGGCACAACCGAAATTATCAAGCATGAACA AACTGGCATGGTGTTTGCCCGCGACGATGCTGCAAGCTGCGCCGACCATATTGCAACGCTCTTTACCCAACCAGCCTTAG CCCAAAAACTCCACAACCAAGCCACCCAGATTGTCGATCGCGAGTTTCGCATGAGCACCATGATCGATCGGGTTGAAGCA GCGCTCTATGCTGCCTGTAACAAGGATTCGCACCATGACTAA
Upstream 100 bases:
>100_bases CGACTACCCCAGCTTCAATGAGCCGCTTGGATTATGCCGGTAATGTACGGCTTGGCGGGCAGTGGCAATGGCCTGAGACG GCCCAAGAGGATCGCGATTA
Downstream 100 bases:
>100_bases ATATATTGCTCGCACACGCCAAATTGTTTGGAAAAATTATCTGCGGGCTTTGCCAGCATTAAAAACTGTCAGCCGTGCCT TAGGGATCGAAAATGCTGCT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MQPLKILVLTSLFPPHYIGGYEVGCGDVVAGLRAKGHDVTVLTSTYGVDREVREGFIERSLTIDIHPVAQTTLAHQRRLY ERELHNQPRILALAEALKPDIVFVWSFYQASMSAVRMLQARGYRTVFFISDHWPIRIGIFDPWHYMPRHPVRWLGRKLLG RKLGRKTGFRNHLPLSYANAIFASDFLLKQTQPIGSMPNAQVIRWGVDYDLFVRRERSASMGQRLLFVGQISGHKGMETL LEAFALVQQKHGFEQATLSIVGAGLSAEYTSEMQRYAETLGISQSVAWRGKLPRQALPDIYASHDILIFPSRWDEPFSIT VVEALAMGLVVVASDTGGTTEIIKHEQTGMVFARDDAASCADHIATLFTQPALAQKLHNQATQIVDREFRMSTMIDRVEA ALYAACNKDSHHD
Sequences:
>Translated_413_residues MQPLKILVLTSLFPPHYIGGYEVGCGDVVAGLRAKGHDVTVLTSTYGVDREVREGFIERSLTIDIHPVAQTTLAHQRRLY ERELHNQPRILALAEALKPDIVFVWSFYQASMSAVRMLQARGYRTVFFISDHWPIRIGIFDPWHYMPRHPVRWLGRKLLG RKLGRKTGFRNHLPLSYANAIFASDFLLKQTQPIGSMPNAQVIRWGVDYDLFVRRERSASMGQRLLFVGQISGHKGMETL LEAFALVQQKHGFEQATLSIVGAGLSAEYTSEMQRYAETLGISQSVAWRGKLPRQALPDIYASHDILIFPSRWDEPFSIT VVEALAMGLVVVASDTGGTTEIIKHEQTGMVFARDDAASCADHIATLFTQPALAQKLHNQATQIVDREFRMSTMIDRVEA ALYAACNKDSHHD >Mature_413_residues MQPLKILVLTSLFPPHYIGGYEVGCGDVVAGLRAKGHDVTVLTSTYGVDREVREGFIERSLTIDIHPVAQTTLAHQRRLY ERELHNQPRILALAEALKPDIVFVWSFYQASMSAVRMLQARGYRTVFFISDHWPIRIGIFDPWHYMPRHPVRWLGRKLLG RKLGRKTGFRNHLPLSYANAIFASDFLLKQTQPIGSMPNAQVIRWGVDYDLFVRRERSASMGQRLLFVGQISGHKGMETL LEAFALVQQKHGFEQATLSIVGAGLSAEYTSEMQRYAETLGISQSVAWRGKLPRQALPDIYASHDILIFPSRWDEPFSIT VVEALAMGLVVVASDTGGTTEIIKHEQTGMVFARDDAASCADHIATLFTQPALAQKLHNQATQIVDREFRMSTMIDRVEA ALYAACNKDSHHD
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 46486; Mature: 46486
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLKILVLTSLFPPHYIGGYEVGCGDVVAGLRAKGHDVTVLTSTYGVDREVREGFIERS CCCCEEEEEHHCCCCCCCCCEECCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCC LTIDIHPVAQTTLAHQRRLYERELHNQPRILALAEALKPDIVFVWSFYQASMSAVRMLQA EEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHH RGYRTVFFISDHWPIRIGIFDPWHYMPRHPVRWLGRKLLGRKLGRKTGFRNHLPLSYANA CCCEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH IFASDFLLKQTQPIGSMPNAQVIRWGVDYDLFVRRERSASMGQRLLFVGQISGHKGMETL HHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEHHHHCCCCEEEEEEECCCCCCHHHH LEAFALVQQKHGFEQATLSIVGAGLSAEYTSEMQRYAETLGISQSVAWRGKLPRQALPDI HHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHCCHH YASHDILIFPSRWDEPFSITVVEALAMGLVVVASDTGGTTEIIKHEQTGMVFARDDAASC HCCCCEEEECCCCCCCCCHHHHHHHHHCEEEEEECCCCCHHHHEECCCCEEEECCCHHHH ADHIATLFTQPALAQKLHNQATQIVDREFRMSTMIDRVEAALYAACNKDSHHD HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQPLKILVLTSLFPPHYIGGYEVGCGDVVAGLRAKGHDVTVLTSTYGVDREVREGFIERS CCCCEEEEEHHCCCCCCCCCEECCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCC LTIDIHPVAQTTLAHQRRLYERELHNQPRILALAEALKPDIVFVWSFYQASMSAVRMLQA EEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEEHHHHHHHHHHHHHHH RGYRTVFFISDHWPIRIGIFDPWHYMPRHPVRWLGRKLLGRKLGRKTGFRNHLPLSYANA CCCEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH IFASDFLLKQTQPIGSMPNAQVIRWGVDYDLFVRRERSASMGQRLLFVGQISGHKGMETL HHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEHHHHCCCCEEEEEEECCCCCCHHHH LEAFALVQQKHGFEQATLSIVGAGLSAEYTSEMQRYAETLGISQSVAWRGKLPRQALPDI HHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHCCHH YASHDILIFPSRWDEPFSITVVEALAMGLVVVASDTGGTTEIIKHEQTGMVFARDDAASC HCCCCEEEECCCCCCCCCHHHHHHHHHCEEEEEECCCCCHHHHEECCCCEEEECCCHHHH ADHIATLFTQPALAQKLHNQATQIVDREFRMSTMIDRVEAALYAACNKDSHHD HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]