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The map label for this gene is ynfJ [C]

Identifier: 159897555

GI number: 159897555

Start: 1170873

End: 1172138

Strand: Direct

Name: ynfJ [C]

Synonym: Haur_1026

Alternate gene names: 159897555

Gene position: 1170873-1172138 (Clockwise)

Preceding gene: 159897554

Following gene: 159897565

Centisome position: 18.45

GC content: 52.61

Gene sequence:

>1266_bases
ATGTTGGGAACTATTATTACGCTGATGCGCCAAGTTGGGCGCTGGACTGGATTAGCTTTGGTGATAGGCTTTGCTGCTGG
TGTGGCAAGTGCCTTCTTTTTAGTCAGTTTGGCTTGGGTGACCAGCTTGCAAACCACCAATTGGTGGCTATTACTCAGTT
TGCCGTTGCTTGGTGGCTTGGTGGCTTGGCTCTATCAGCGTTTTGGCACAAGCGTGGCGGCTGGCAATAATCTGATCATT
GAACAACTGCATAACCCTGATTCGGCGGGAATTCCCTTGCGCATGGCTCCGTTGGTGTTGCTCGGAACCTTGTTGACCCA
TCTTGGTGGTGGCTCGGCTGGGCGCGAAGGGACGGCAGTGCAAATGGGCGCGAGTTTGGCAGCGCGAATCGGGCGTTGGT
GGCGCTTGCCCCAAGCTGAATGGCGTTTGGTAGTAATGATGGGCATCAGCGCGGGGTTCAGCAGCGTCTTTGGTACGCCG
ATAGCCGGCACAATTTTCGCCATGGAAGTGCTAGCATTTGGGGTTTTGCGCTATGAAGCGTTGTTGCCATGTTTGGTGGC
AGCCTTAGTTGGCGATGGAGTGGTGCGTTGGCTGAATGTTGCCCATAGCCATTATCATGTAGGCAGTGTACCCGATTTGA
GCATGATCTGGGCGATTTTAGTTGGAGCAGGAATTTGCTTTGGCTTAGCCAGCAGTGCGTTTGCGATCTGGACTGAATTG
GTGCAAACCTGGTCACGGCGTTGGCTGCCCAACCCAATTTTGCGGGCAGTGGCTGGTGGCGGGCTGATTGTAAGCATCAG
TTTTTTGTTGAATACGCGTGATTACAATGGGCTAAGCTTGCCGTTGCTGGCGCAGGCTTTTGAGCCACGAGGCGTTGTAT
TTTGGGCTTTTGCACTCAAATTATTGTTAACTGGCTTGACCTTGGGCGTGGGCTTTAAAGGTGGCGAAGTAACGCCATTG
TTTGTGATTGGCGCGACGCTTGGCTCAGCTTTAGCGCAATTATTTGGTGTGCCAACTGATCTGTTGGCGGCATTGGGCTT
TATTGCAGTGTTTGCTGGGGCTGCTAATACCCCGATTGCCTGTGTCTTGATGGGAGTTGAATTATTTGGCTCGGCCTTGC
TTGGGCCTTTGATGCTCACAACCTGCATTGCCTACGCCATTTCGGGCCATCGCGGAATCTACGCGGCGCAACGGGTTGGC
TGGGCCAAACGCCAGCATTTGGCACATCAAACTAGCAAACGGCTTGATCAACTGCATATTGATTAA

Upstream 100 bases:

>100_bases
GCTGCGGTTTGGCAAGCGCCCCGAAATTAGCGTGATTCGGTTGACTGGACAGAAGATCGGGAATAGTTTTTAAAACCAGA
TTGGGTAGTTTAGGAATCAG

Downstream 100 bases:

>100_bases
AAAATGAGGCCCGAACTCTAGCCTAGTGTCGGGCCTCGGCAGTGCTATTGATTTGCACACATCAATACGTTTAAACTACC
ACGTCAGTCCTAAGAGCGCT

Product: chloride channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MLGTIITLMRQVGRWTGLALVIGFAAGVASAFFLVSLAWVTSLQTTNWWLLLSLPLLGGLVAWLYQRFGTSVAAGNNLII
EQLHNPDSAGIPLRMAPLVLLGTLLTHLGGGSAGREGTAVQMGASLAARIGRWWRLPQAEWRLVVMMGISAGFSSVFGTP
IAGTIFAMEVLAFGVLRYEALLPCLVAALVGDGVVRWLNVAHSHYHVGSVPDLSMIWAILVGAGICFGLASSAFAIWTEL
VQTWSRRWLPNPILRAVAGGGLIVSISFLLNTRDYNGLSLPLLAQAFEPRGVVFWAFALKLLLTGLTLGVGFKGGEVTPL
FVIGATLGSALAQLFGVPTDLLAALGFIAVFAGAANTPIACVLMGVELFGSALLGPLMLTTCIAYAISGHRGIYAAQRVG
WAKRQHLAHQTSKRLDQLHID

Sequences:

>Translated_421_residues
MLGTIITLMRQVGRWTGLALVIGFAAGVASAFFLVSLAWVTSLQTTNWWLLLSLPLLGGLVAWLYQRFGTSVAAGNNLII
EQLHNPDSAGIPLRMAPLVLLGTLLTHLGGGSAGREGTAVQMGASLAARIGRWWRLPQAEWRLVVMMGISAGFSSVFGTP
IAGTIFAMEVLAFGVLRYEALLPCLVAALVGDGVVRWLNVAHSHYHVGSVPDLSMIWAILVGAGICFGLASSAFAIWTEL
VQTWSRRWLPNPILRAVAGGGLIVSISFLLNTRDYNGLSLPLLAQAFEPRGVVFWAFALKLLLTGLTLGVGFKGGEVTPL
FVIGATLGSALAQLFGVPTDLLAALGFIAVFAGAANTPIACVLMGVELFGSALLGPLMLTTCIAYAISGHRGIYAAQRVG
WAKRQHLAHQTSKRLDQLHID
>Mature_421_residues
MLGTIITLMRQVGRWTGLALVIGFAAGVASAFFLVSLAWVTSLQTTNWWLLLSLPLLGGLVAWLYQRFGTSVAAGNNLII
EQLHNPDSAGIPLRMAPLVLLGTLLTHLGGGSAGREGTAVQMGASLAARIGRWWRLPQAEWRLVVMMGISAGFSSVFGTP
IAGTIFAMEVLAFGVLRYEALLPCLVAALVGDGVVRWLNVAHSHYHVGSVPDLSMIWAILVGAGICFGLASSAFAIWTEL
VQTWSRRWLPNPILRAVAGGGLIVSISFLLNTRDYNGLSLPLLAQAFEPRGVVFWAFALKLLLTGLTLGVGFKGGEVTPL
FVIGATLGSALAQLFGVPTDLLAALGFIAVFAGAANTPIACVLMGVELFGSALLGPLMLTTCIAYAISGHRGIYAAQRVG
WAKRQHLAHQTSKRLDQLHID

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 44673; Mature: 44673

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTIITLMRQVGRWTGLALVIGFAAGVASAFFLVSLAWVTSLQTTNWWLLLSLPLLGGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VAWLYQRFGTSVAAGNNLIIEQLHNPDSAGIPLRMAPLVLLGTLLTHLGGGSAGREGTAV
HHHHHHHHCCHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QMGASLAARIGRWWRLPQAEWRLVVMMGISAGFSSVFGTPIAGTIFAMEVLAFGVLRYEA
HHHHHHHHHHHHHHCCCCHHCEEEEEEECHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LLPCLVAALVGDGVVRWLNVAHSHYHVGSVPDLSMIWAILVGAGICFGLASSAFAIWTEL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQTWSRRWLPNPILRAVAGGGLIVSISFLLNTRDYNGLSLPLLAQAFEPRGVVFWAFALK
HHHHHHCCCCCHHHHHHCCCCCEEEEEHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH
LLLTGLTLGVGFKGGEVTPLFVIGATLGSALAQLFGVPTDLLAALGFIAVFAGAANTPIA
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH
CVLMGVELFGSALLGPLMLTTCIAYAISGHRGIYAAQRVGWAKRQHLAHQTSKRLDQLHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
D
C
>Mature Secondary Structure
MLGTIITLMRQVGRWTGLALVIGFAAGVASAFFLVSLAWVTSLQTTNWWLLLSLPLLGGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VAWLYQRFGTSVAAGNNLIIEQLHNPDSAGIPLRMAPLVLLGTLLTHLGGGSAGREGTAV
HHHHHHHHCCHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QMGASLAARIGRWWRLPQAEWRLVVMMGISAGFSSVFGTPIAGTIFAMEVLAFGVLRYEA
HHHHHHHHHHHHHHCCCCHHCEEEEEEECHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LLPCLVAALVGDGVVRWLNVAHSHYHVGSVPDLSMIWAILVGAGICFGLASSAFAIWTEL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQTWSRRWLPNPILRAVAGGGLIVSISFLLNTRDYNGLSLPLLAQAFEPRGVVFWAFALK
HHHHHHCCCCCHHHHHHCCCCCEEEEEHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH
LLLTGLTLGVGFKGGEVTPLFVIGATLGSALAQLFGVPTDLLAALGFIAVFAGAANTPIA
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHH
CVLMGVELFGSALLGPLMLTTCIAYAISGHRGIYAAQRVGWAKRQHLAHQTSKRLDQLHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]