| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ykuE [H]
Identifier: 159897554
GI number: 159897554
Start: 1169697
End: 1170845
Strand: Direct
Name: ykuE [H]
Synonym: Haur_1025
Alternate gene names: 159897554
Gene position: 1169697-1170845 (Clockwise)
Preceding gene: 159897551
Following gene: 159897555
Centisome position: 18.43
GC content: 49.52
Gene sequence:
>1149_bases GTGGTGCGTAAGCTTGGGTTTTGGGGTTTGAACATCGGCATTTGGCTGGCTGGGATGGGCTTGCTGGGCGGCCTGTTTGG CTGGAATTTGGCGTGGCTCAAAGATTGGCAGTGGCTGGCTGAGCAAACAGGTTGGCGTTTTTGGCTGGCTCAATGGATAT TTCGAGCATTGGTCTGCTTGCCCTTAGTATTTGGCTTGCTGTTATTGCTGCATCCCTTGTGGCTTGGCCGTCGTTTACTC GCTGCAACTAAAGCTAATTTAATGGTTGAACCCTCTCCCAATGCAGAAACGTTAAGTCGGCGGCGTTTTATGCTTGAAGC TGGCTTATTGGGTGGTTTGGTTGGTTATAGCAGTGTGATCGAGCCATTTAACCCAGAAATTGTTGAGCTTGAGTTACCGA TTGCCAATTTGCCAAGCCGTTTCGAGGGCTTTAAAATTGTCCAATTAAGCGATTTGCATGTTTGTGCTTATACTCCCGCT GCTGATGTAGCCCGCGCTGTGGCCCTGATTAATCAACTTGATGCTGATATTGTAGCAATTACTGGTGATTTTGTTGATCA GCATGCAAAATTTGCTGATGATGCAACTGTGCCCTTGCGTCAATTACAAGCTCGCGAAGGCATTTTTTCGGTGCTCGGCA ACCACGATTACTACACTGGCGATATTGATCGCATGATTTGGGCGATTAAACGGGCAGATCTTGGACTGTTGATCAATCAG CAAACGGTTATTCGGCGTGGCGCTGATCGTTTGAATTTGGTGGGCTTAGATGACCCAAAACATGATGATGGTGATGGCTG GAGCCATAGCAGCATTGATCTGACCCGCGCATTTGCTAAGCTATCGGCTGGTGATCCCTGCATCACGTTGTTGCATAACC CAATTTTTGCACCAAGTGTGGTAAAGTCGTATGGGCCACAGGTGATTCTGGCCGGGCATACCCATGGCGGCCAGATCTGG GTTCCGATCTTGACCGAAAGCGCCGTGCGTTCGCGCGATCGTTTTGTGGCTGGGCGCTATCAACTTGCCAACAGCCAGAT CTATGTTAATCGTGGTTGGGGATTTACTGGGCCGCCGCTGCGGTTTGGCAAGCGCCCCGAAATTAGCGTGATTCGGTTGA CTGGACAGAAGATCGGGAATAGTTTTTAA
Upstream 100 bases:
>100_bases CAATCAGAGTGGACTAGCGATTGATTGTATTGATTGCTGTATGCCAACATACTTGAGTGCTAGAATGATGAAACCGATTG GATACGTGGAGAGCAGGCTT
Downstream 100 bases:
>100_bases AACCAGATTGGGTAGTTTAGGAATCAGATGTTGGGAACTATTATTACGCTGATGCGCCAAGTTGGGCGCTGGACTGGATT AGCTTTGGTGATAGGCTTTG
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MVRKLGFWGLNIGIWLAGMGLLGGLFGWNLAWLKDWQWLAEQTGWRFWLAQWIFRALVCLPLVFGLLLLLHPLWLGRRLL AATKANLMVEPSPNAETLSRRRFMLEAGLLGGLVGYSSVIEPFNPEIVELELPIANLPSRFEGFKIVQLSDLHVCAYTPA ADVARAVALINQLDADIVAITGDFVDQHAKFADDATVPLRQLQAREGIFSVLGNHDYYTGDIDRMIWAIKRADLGLLINQ QTVIRRGADRLNLVGLDDPKHDDGDGWSHSSIDLTRAFAKLSAGDPCITLLHNPIFAPSVVKSYGPQVILAGHTHGGQIW VPILTESAVRSRDRFVAGRYQLANSQIYVNRGWGFTGPPLRFGKRPEISVIRLTGQKIGNSF
Sequences:
>Translated_382_residues MVRKLGFWGLNIGIWLAGMGLLGGLFGWNLAWLKDWQWLAEQTGWRFWLAQWIFRALVCLPLVFGLLLLLHPLWLGRRLL AATKANLMVEPSPNAETLSRRRFMLEAGLLGGLVGYSSVIEPFNPEIVELELPIANLPSRFEGFKIVQLSDLHVCAYTPA ADVARAVALINQLDADIVAITGDFVDQHAKFADDATVPLRQLQAREGIFSVLGNHDYYTGDIDRMIWAIKRADLGLLINQ QTVIRRGADRLNLVGLDDPKHDDGDGWSHSSIDLTRAFAKLSAGDPCITLLHNPIFAPSVVKSYGPQVILAGHTHGGQIW VPILTESAVRSRDRFVAGRYQLANSQIYVNRGWGFTGPPLRFGKRPEISVIRLTGQKIGNSF >Mature_382_residues MVRKLGFWGLNIGIWLAGMGLLGGLFGWNLAWLKDWQWLAEQTGWRFWLAQWIFRALVCLPLVFGLLLLLHPLWLGRRLL AATKANLMVEPSPNAETLSRRRFMLEAGLLGGLVGYSSVIEPFNPEIVELELPIANLPSRFEGFKIVQLSDLHVCAYTPA ADVARAVALINQLDADIVAITGDFVDQHAKFADDATVPLRQLQAREGIFSVLGNHDYYTGDIDRMIWAIKRADLGLLINQ QTVIRRGADRLNLVGLDDPKHDDGDGWSHSSIDLTRAFAKLSAGDPCITLLHNPIFAPSVVKSYGPQVILAGHTHGGQIW VPILTESAVRSRDRFVAGRYQLANSQIYVNRGWGFTGPPLRFGKRPEISVIRLTGQKIGNSF
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031196, Length=290, Percent_Identity=31.0344827586207, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI210031210, Length=290, Percent_Identity=31.0344827586207, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI87081695, Length=285, Percent_Identity=31.2280701754386, Blast_Score=95, Evalue=9e-21, Organism=Caenorhabditis elegans, GI115535028, Length=259, Percent_Identity=29.7297297297297, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI115535030, Length=259, Percent_Identity=29.7297297297297, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71996034, Length=254, Percent_Identity=26.3779527559055, Blast_Score=93, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006311 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 42462; Mature: 42462
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRKLGFWGLNIGIWLAGMGLLGGLFGWNLAWLKDWQWLAEQTGWRFWLAQWIFRALVCL CCCCCEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH PLVFGLLLLLHPLWLGRRLLAATKANLMVEPSPNAETLSRRRFMLEAGLLGGLVGYSSVI HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC EPFNPEIVELELPIANLPSRFEGFKIVQLSDLHVCAYTPAADVARAVALINQLDADIVAI CCCCCCEEEEECCCCCCCCCCCCEEEEEEECCEEEEECCHHHHHHHHHHHHHCCCCEEEE TGDFVDQHAKFADDATVPLRQLQAREGIFSVLGNHDYYTGDIDRMIWAIKRADLGLLINQ ECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECC QTVIRRGADRLNLVGLDDPKHDDGDGWSHSSIDLTRAFAKLSAGDPCITLLHNPIFAPSV HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHH VKSYGPQVILAGHTHGGQIWVPILTESAVRSRDRFVAGRYQLANSQIYVNRGWGFTGPPL HHHCCCEEEEEECCCCCEEEEEEECHHHHHHHHHEEEEEEEECCCEEEEECCCCCCCCCC RFGKRPEISVIRLTGQKIGNSF CCCCCCCEEEEEEECHHCCCCC >Mature Secondary Structure MVRKLGFWGLNIGIWLAGMGLLGGLFGWNLAWLKDWQWLAEQTGWRFWLAQWIFRALVCL CCCCCEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH PLVFGLLLLLHPLWLGRRLLAATKANLMVEPSPNAETLSRRRFMLEAGLLGGLVGYSSVI HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC EPFNPEIVELELPIANLPSRFEGFKIVQLSDLHVCAYTPAADVARAVALINQLDADIVAI CCCCCCEEEEECCCCCCCCCCCCEEEEEEECCEEEEECCHHHHHHHHHHHHHCCCCEEEE TGDFVDQHAKFADDATVPLRQLQAREGIFSVLGNHDYYTGDIDRMIWAIKRADLGLLINQ ECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECC QTVIRRGADRLNLVGLDDPKHDDGDGWSHSSIDLTRAFAKLSAGDPCITLLHNPIFAPSV HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHH VKSYGPQVILAGHTHGGQIWVPILTESAVRSRDRFVAGRYQLANSQIYVNRGWGFTGPPL HHHCCCEEEEEECCCCCEEEEEEECHHHHHHHHHEEEEEEEECCCEEEEECCCCCCCCCC RFGKRPEISVIRLTGQKIGNSF CCCCCCCEEEEEEECHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]