| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897449
Identifier: 159897449
GI number: 159897449
Start: 1052533
End: 1053255
Strand: Direct
Name: 159897449
Synonym: Haur_0920
Alternate gene names: NA
Gene position: 1052533-1053255 (Clockwise)
Preceding gene: 159897448
Following gene: 159897450
Centisome position: 16.58
GC content: 52.42
Gene sequence:
>723_bases ATGAGCGAACATTTCTTCGGTGCTGGCGTGAGTGCCAGTTCCTATATTCACGAATGGACAAGCTTGCAACGGGGCAACCC ACTGCCTGAGACAAATCAGCTTGCTAGCTCATGGTGGTCAGGCCTGTTTGAAGCCAAGGCCAAAATCGCTTTGCCAGCGG CCTATCCAACCCATTTGAACTATCAACAACTGATTAATCAACGCCAAAGTTTGCGTGAATATGCTGAGCGTCCAGTGAAT TTGGCTGATTTGGCGACCTTTTTGGAGCATGCCAGTCGCCCGCTCAACCCAGCCACCAAGCCCTTGAGCCTGCTTGCGCC GCTGGTGTTGAAATCCGCCGATTTGGCCTTGGGTGGCTATGTGTATAACCCCGCCGCCCATCAATTAGCCGTATTGCGTA CTGCCGATCCGCTGGAGCCATTGCAACGCTATTGCTTTCAACGTGAATTTTTGCAAGCACCATTGATTGTGTTAGTGCTA ACCTCGCTGCCCAGCGCGATCAACCAAGCTGGTGATCGCGGCTATCGCCAGGCCTTGCTTGATGCCGGCGCACATTTGCA GCGTTTATATGTTGCAGCTCAGCGCGTCGGCATGATCGGTTGTGCCACTGGCAGCGTGATTCAAGGCCAATTAGCCCGTT GGCTCGGCTTTGATGACTATCAAACCCAGGTTTTAATCGGTTTTGCTGCTGGCTATCCTCACAAGGAGCAAACTCATGAC TAA
Upstream 100 bases:
>100_bases TCTACGATCAAGAGCTGCGCGATCTGCTCCAGGTCTATAGCCCAAGCGAAACCCCGTTGCTGGTGCTGCGGCTGGTTGCG CCCAATCCTGAGGTGCTGCA
Downstream 100 bases:
>100_bases CCCAGCTTTAACTCTGAATGATTTTGCTGCGCTTGAGGCCAGCACCGACTATCGCCCGCACGTTGTTGATGATGTGCAAG TTTCGCCATTTAGCCAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSEHFFGAGVSASSYIHEWTSLQRGNPLPETNQLASSWWSGLFEAKAKIALPAAYPTHLNYQQLINQRQSLREYAERPVN LADLATFLEHASRPLNPATKPLSLLAPLVLKSADLALGGYVYNPAAHQLAVLRTADPLEPLQRYCFQREFLQAPLIVLVL TSLPSAINQAGDRGYRQALLDAGAHLQRLYVAAQRVGMIGCATGSVIQGQLARWLGFDDYQTQVLIGFAAGYPHKEQTHD
Sequences:
>Translated_240_residues MSEHFFGAGVSASSYIHEWTSLQRGNPLPETNQLASSWWSGLFEAKAKIALPAAYPTHLNYQQLINQRQSLREYAERPVN LADLATFLEHASRPLNPATKPLSLLAPLVLKSADLALGGYVYNPAAHQLAVLRTADPLEPLQRYCFQREFLQAPLIVLVL TSLPSAINQAGDRGYRQALLDAGAHLQRLYVAAQRVGMIGCATGSVIQGQLARWLGFDDYQTQVLIGFAAGYPHKEQTHD >Mature_239_residues SEHFFGAGVSASSYIHEWTSLQRGNPLPETNQLASSWWSGLFEAKAKIALPAAYPTHLNYQQLINQRQSLREYAERPVNL ADLATFLEHASRPLNPATKPLSLLAPLVLKSADLALGGYVYNPAAHQLAVLRTADPLEPLQRYCFQREFLQAPLIVLVLT SLPSAINQAGDRGYRQALLDAGAHLQRLYVAAQRVGMIGCATGSVIQGQLARWLGFDDYQTQVLIGFAAGYPHKEQTHD
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26449; Mature: 26318
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHFFGAGVSASSYIHEWTSLQRGNPLPETNQLASSWWSGLFEAKAKIALPAAYPTHLN CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC YQQLINQRQSLREYAERPVNLADLATFLEHASRPLNPATKPLSLLAPLVLKSADLALGGY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCCE VYNPAAHQLAVLRTADPLEPLQRYCFQREFLQAPLIVLVLTSLPSAINQAGDRGYRQALL EECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAGAHLQRLYVAAQRVGMIGCATGSVIQGQLARWLGFDDYQTQVLIGFAAGYPHKEQTHD HHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCCCC >Mature Secondary Structure SEHFFGAGVSASSYIHEWTSLQRGNPLPETNQLASSWWSGLFEAKAKIALPAAYPTHLN CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC YQQLINQRQSLREYAERPVNLADLATFLEHASRPLNPATKPLSLLAPLVLKSADLALGGY HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCCE VYNPAAHQLAVLRTADPLEPLQRYCFQREFLQAPLIVLVLTSLPSAINQAGDRGYRQALL EECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAGAHLQRLYVAAQRVGMIGCATGSVIQGQLARWLGFDDYQTQVLIGFAAGYPHKEQTHD HHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA