| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897448
Identifier: 159897448
GI number: 159897448
Start: 1050704
End: 1052536
Strand: Direct
Name: 159897448
Synonym: Haur_0919
Alternate gene names: NA
Gene position: 1050704-1052536 (Clockwise)
Preceding gene: 159897447
Following gene: 159897449
Centisome position: 16.56
GC content: 54.39
Gene sequence:
>1833_bases ATGACCCAGGCAATTGATTTACACAGCCAACTCCAGAGCGATCCGCAGGTGCAACTTCCAACTCGCCCACGGATCTCCGA TGAAATTGCCCGAGTTTGGCATAACGAACAGCTGTTGTTGTTGCTGGGCGGGCCGCAAGATGTGGTGTTGCGTGGCAAAG CGGTGCGCAATCTGCTGCCGCAACTCTTGCCCTTGCTGAATGGCCTCAACACCCGCGAAACGATTGGCGAACGCTTGGCC CAATTCAAGCCCACAACGATTGACGATAGCTTGCAGTTGTTGCATGTGCAGGGGGTGCTTGAAGAAGGCCCATTGCCGAG CAATACACTTGATCCGCAAGTTGCCCGTGCGTTCAGTCAACAACTAGCTTTTTACAGCCGCTTTGTTGACCAAACGCGGG TCTGTCGCAATCGTTATGAAGTGCTGCAACGCTTGCAAACAACGCCTTTGTTGTTGATTGGTGGCGAACGCTTGGTTGCT CCATTGCTGCATCAATTGGCGCAAGCTGGCTTAGGCCGCGCCACTTGGCTGGCCAATTCAGCTCCAACCACAACCTATGC CCTGCCACATTTGGCGCTTGATCTTCAAGTTCCGCAGGCTGATCAATTACCTGCAGCAGTTGATCATTGGTTAGCTGAGC ATCACGATGGCTTGATCTGTCTGCTGACCAGCACGGCGCAGGCCGAATTAACCCAAGCGCTCAATCAACGGGCAATTCAA GCGCAAACTCGCTTTACCCGACTTTGGCTGCACCCACAGCATATTGAACTTGGCCCAACCACCTTTGCTGGTGAAGCTGG CTGTTATGCCTGTGCCGAGCAAGTTGATAGCCACGAACCTCAATTAAGCGAGCCAACCGCGCCGCTGAGCCTCAACGAGC AGTTAGCCTTGAGCCAAGCAAGTTTAGTGGTTGGCAACCTAATTTCGGGTTTGAGTCCGGTGATTACGGGCGGCGTGCGT TATGTGCTTGATCCAACGACGCTTGAATTTGTGGCGCAATCGGTGCATCGTTTGGTGTTGTGCCCAGTTTGCGGCCAGCC CAACCTCGATGCGCCCCGCGATCTGTTGGTGGGCGCGGGCCATTTCGAGAATTTGCCGCTGTGGTATCACGCCAACACCG ATGAGCGCAGTTACGCGATTTTCCCCAAGGCGCATCAGCAGCATTATGCGCCAAAAAATGCGATTGCAATCGTCAGTGGA GCCAAGGGTTATACCAATAGCCAACGCTATGCCCTGGGCGAATTGCAAGGCCAATGGCAGCCTGATTCAACTGTTGATCT GAGCGTTCAACTGCCAGTTCAAACCTCGATTGCGCCCTTGGCTTGGCTGTTTGAGCAAGCATTTGTGCGCAAGCCAGCCA CCCAGGTGATCGCCGCTGGCCAACGTTTTGTACCTTCGGGCGGCAATCTAGCCTCGCAAACGGTCTATTTGCTCAATCAC AAGCTGAGCAATTTGGCGGCTGGCATCTATCACTTGAACCAACATGACGCTTCGTTGGAAGCAATGCGCCCACAGTTTAG CTGGGATGACGTTGCCAAAGCCTTCCCCAGTGATCCGCTGAATCAACAAACCTTGGGTTTGATTGTGCTGACGGCGGCGA TTGGGCGGGTTGAAGGCAAATATGGCGCAAAATCGTATCGGATCGCGCTCTACGATTGTGGCGTTGCCGCGCAGGCAATT GAATTTTTGGCAGCTGCGGCAGGCTGGCAAATCGAGCAAATCAGCGCCTTCTACGATCAAGAGCTGCGCGATCTGCTCCA GGTCTATAGCCCAAGCGAAACCCCGTTGCTGGTGCTGCGGCTGGTTGCGCCCAATCCTGAGGTGCTGCAATGA
Upstream 100 bases:
>100_bases GTTCAGCCTGTGGTGGTCAGCAAAATACTACTTGGATTGGCCGTGATCAATTAGCTCAGGTGGTGGCCAAATTAAGCTTG CAAGCCCGCGAGGTGGCACT
Downstream 100 bases:
>100_bases GCGAACATTTCTTCGGTGCTGGCGTGAGTGCCAGTTCCTATATTCACGAATGGACAAGCTTGCAACGGGGCAACCCACTG CCTGAGACAAATCAGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTQAIDLHSQLQSDPQVQLPTRPRISDEIARVWHNEQLLLLLGGPQDVVLRGKAVRNLLPQLLPLLNGLNTRETIGERLA QFKPTTIDDSLQLLHVQGVLEEGPLPSNTLDPQVARAFSQQLAFYSRFVDQTRVCRNRYEVLQRLQTTPLLLIGGERLVA PLLHQLAQAGLGRATWLANSAPTTTYALPHLALDLQVPQADQLPAAVDHWLAEHHDGLICLLTSTAQAELTQALNQRAIQ AQTRFTRLWLHPQHIELGPTTFAGEAGCYACAEQVDSHEPQLSEPTAPLSLNEQLALSQASLVVGNLISGLSPVITGGVR YVLDPTTLEFVAQSVHRLVLCPVCGQPNLDAPRDLLVGAGHFENLPLWYHANTDERSYAIFPKAHQQHYAPKNAIAIVSG AKGYTNSQRYALGELQGQWQPDSTVDLSVQLPVQTSIAPLAWLFEQAFVRKPATQVIAAGQRFVPSGGNLASQTVYLLNH KLSNLAAGIYHLNQHDASLEAMRPQFSWDDVAKAFPSDPLNQQTLGLIVLTAAIGRVEGKYGAKSYRIALYDCGVAAQAI EFLAAAAGWQIEQISAFYDQELRDLLQVYSPSETPLLVLRLVAPNPEVLQ
Sequences:
>Translated_610_residues MTQAIDLHSQLQSDPQVQLPTRPRISDEIARVWHNEQLLLLLGGPQDVVLRGKAVRNLLPQLLPLLNGLNTRETIGERLA QFKPTTIDDSLQLLHVQGVLEEGPLPSNTLDPQVARAFSQQLAFYSRFVDQTRVCRNRYEVLQRLQTTPLLLIGGERLVA PLLHQLAQAGLGRATWLANSAPTTTYALPHLALDLQVPQADQLPAAVDHWLAEHHDGLICLLTSTAQAELTQALNQRAIQ AQTRFTRLWLHPQHIELGPTTFAGEAGCYACAEQVDSHEPQLSEPTAPLSLNEQLALSQASLVVGNLISGLSPVITGGVR YVLDPTTLEFVAQSVHRLVLCPVCGQPNLDAPRDLLVGAGHFENLPLWYHANTDERSYAIFPKAHQQHYAPKNAIAIVSG AKGYTNSQRYALGELQGQWQPDSTVDLSVQLPVQTSIAPLAWLFEQAFVRKPATQVIAAGQRFVPSGGNLASQTVYLLNH KLSNLAAGIYHLNQHDASLEAMRPQFSWDDVAKAFPSDPLNQQTLGLIVLTAAIGRVEGKYGAKSYRIALYDCGVAAQAI EFLAAAAGWQIEQISAFYDQELRDLLQVYSPSETPLLVLRLVAPNPEVLQ >Mature_609_residues TQAIDLHSQLQSDPQVQLPTRPRISDEIARVWHNEQLLLLLGGPQDVVLRGKAVRNLLPQLLPLLNGLNTRETIGERLAQ FKPTTIDDSLQLLHVQGVLEEGPLPSNTLDPQVARAFSQQLAFYSRFVDQTRVCRNRYEVLQRLQTTPLLLIGGERLVAP LLHQLAQAGLGRATWLANSAPTTTYALPHLALDLQVPQADQLPAAVDHWLAEHHDGLICLLTSTAQAELTQALNQRAIQA QTRFTRLWLHPQHIELGPTTFAGEAGCYACAEQVDSHEPQLSEPTAPLSLNEQLALSQASLVVGNLISGLSPVITGGVRY VLDPTTLEFVAQSVHRLVLCPVCGQPNLDAPRDLLVGAGHFENLPLWYHANTDERSYAIFPKAHQQHYAPKNAIAIVSGA KGYTNSQRYALGELQGQWQPDSTVDLSVQLPVQTSIAPLAWLFEQAFVRKPATQVIAAGQRFVPSGGNLASQTVYLLNHK LSNLAAGIYHLNQHDASLEAMRPQFSWDDVAKAFPSDPLNQQTLGLIVLTAAIGRVEGKYGAKSYRIALYDCGVAAQAIE FLAAAAGWQIEQISAFYDQELRDLLQVYSPSETPLLVLRLVAPNPEVLQ
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66931; Mature: 66800
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAIDLHSQLQSDPQVQLPTRPRISDEIARVWHNEQLLLLLGGPQDVVLRGKAVRNLLP CCCCCCHHHHHCCCCCEECCCCCCHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHH QLLPLLNGLNTRETIGERLAQFKPTTIDDSLQLLHVQGVLEEGPLPSNTLDPQVARAFSQ HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHEEHHHHHCCCCCCCCCCHHHHHHHHH QLAFYSRFVDQTRVCRNRYEVLQRLQTTPLLLIGGERLVAPLLHQLAQAGLGRATWLANS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCC APTTTYALPHLALDLQVPQADQLPAAVDHWLAEHHDGLICLLTSTAQAELTQALNQRAIQ CCCCEEECCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH AQTRFTRLWLHPQHIELGPTTFAGEAGCYACAEQVDSHEPQLSEPTAPLSLNEQLALSQA HHHHHHHEEECCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH SLVVGNLISGLSPVITGGVRYVLDPTTLEFVAQSVHRLVLCPVCGQPNLDAPRDLLVGAG HHHHHHHHHCHHHHHHCCEEEEECCHHHHHHHHHHHHEEEEECCCCCCCCCCHHHEEECC HFENLPLWYHANTDERSYAIFPKAHQQHYAPKNAIAIVSGAKGYTNSQRYALGELQGQWQ CCCCCCEEEECCCCCCEEEECCCHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCCCCCC PDSTVDLSVQLPVQTSIAPLAWLFEQAFVRKPATQVIAAGQRFVPSGGNLASQTVYLLNH CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH KLSNLAAGIYHLNQHDASLEAMRPQFSWDDVAKAFPSDPLNQQTLGLIVLTAAIGRVEGK HHHHHHHHHHEECCCCCHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC YGAKSYRIALYDCGVAAQAIEFLAAAAGWQIEQISAFYDQELRDLLQVYSPSETPLLVLR CCCCEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LVAPNPEVLQ EECCCCCCCC >Mature Secondary Structure TQAIDLHSQLQSDPQVQLPTRPRISDEIARVWHNEQLLLLLGGPQDVVLRGKAVRNLLP CCCCCHHHHHCCCCCEECCCCCCHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHH QLLPLLNGLNTRETIGERLAQFKPTTIDDSLQLLHVQGVLEEGPLPSNTLDPQVARAFSQ HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHEEHHHHHCCCCCCCCCCHHHHHHHHH QLAFYSRFVDQTRVCRNRYEVLQRLQTTPLLLIGGERLVAPLLHQLAQAGLGRATWLANS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCC APTTTYALPHLALDLQVPQADQLPAAVDHWLAEHHDGLICLLTSTAQAELTQALNQRAIQ CCCCEEECCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH AQTRFTRLWLHPQHIELGPTTFAGEAGCYACAEQVDSHEPQLSEPTAPLSLNEQLALSQA HHHHHHHEEECCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH SLVVGNLISGLSPVITGGVRYVLDPTTLEFVAQSVHRLVLCPVCGQPNLDAPRDLLVGAG HHHHHHHHHCHHHHHHCCEEEEECCHHHHHHHHHHHHEEEEECCCCCCCCCCHHHEEECC HFENLPLWYHANTDERSYAIFPKAHQQHYAPKNAIAIVSGAKGYTNSQRYALGELQGQWQ CCCCCCEEEECCCCCCEEEECCCHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCCCCCC PDSTVDLSVQLPVQTSIAPLAWLFEQAFVRKPATQVIAAGQRFVPSGGNLASQTVYLLNH CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH KLSNLAAGIYHLNQHDASLEAMRPQFSWDDVAKAFPSDPLNQQTLGLIVLTAAIGRVEGK HHHHHHHHHHEECCCCCHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC YGAKSYRIALYDCGVAAQAIEFLAAAAGWQIEQISAFYDQELRDLLQVYSPSETPLLVLR CCCCEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LVAPNPEVLQ EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA