Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897447

Identifier: 159897447

GI number: 159897447

Start: 1049889

End: 1050707

Strand: Direct

Name: 159897447

Synonym: Haur_0918

Alternate gene names: NA

Gene position: 1049889-1050707 (Clockwise)

Preceding gene: 159897446

Following gene: 159897448

Centisome position: 16.54

GC content: 54.58

Gene sequence:

>819_bases
ATGGATCAACTTTATTCAACCCTTGTGGCAACCCATCAGCAATGGCTGTTTGCCCAAGGTTTACACGAAAATCGCTCAGC
TCGCTTGCTTTTGGTGACCGATGCAGTGATGGCGCAGGCACTCTTGGCTCGCTTGGGGCAACTGCCCTTAGCCCAGGTGA
CCGTTGCCGCCTTATCCAGCGCCGATCATGGCCCAATTTCACAACAGATTCGCGAATTGACCAGCACGTTTCCAATTCAG
CTGCTAGCGCGACCCTTCGCTGCTGGTGGTTTGGGCTTGCTGCTCAGTCGCTATCACGCCGCTGCATTAATCACCCAGCG
GCCTTATCCGGTAGTAGCCGAAGCCCTGAATCAAGCCAGTTTACGGGCTGCCACGCCATGGACTGCGCTCAGTCTGTGGG
GCGCACAAATTACCTTGGGGCCGACGATTTTGCCCAATCACACCGCCTGTTATGCCTGCTATCAAGCGCGATTACGCTCG
TGCGAAACCCGCAATGATGTCTGGCAGGCGCGTGATGGCTTTTTGCGGCGGCAACAACAAGCGTTATTTCAGCCCTCGCT
GGCGGCGCTCAATCAATTGGCTGCTAGCTATGGCTTGGTCGAAATCGAGCGCTTATTGCTTGGCCAACAACCACCGTTGG
CGCTGGGCCGCGAAGTTCAATGGGATACATTCAATCTTGGCGTGAGCCGCAATCATGTTGAGCCATTTGAAAACTGTTCA
GCCTGTGGTGGTCAGCAAAATACTACTTGGATTGGCCGTGATCAATTAGCTCAGGTGGTGGCCAAATTAAGCTTGCAAGC
CCGCGAGGTGGCACTATGA

Upstream 100 bases:

>100_bases
GCTTATATAGCGTGCCGGAGCGCATGGGCTACCCAGTTTTGGCCGAAGCTGAATTAAACCATTGGCCTCAGCCATTTGCC
TAGTTTGAAAGGATTGCCCG

Downstream 100 bases:

>100_bases
CCCAGGCAATTGATTTACACAGCCAACTCCAGAGCGATCCGCAGGTGCAACTTCCAACTCGCCCACGGATCTCCGATGAA
ATTGCCCGAGTTTGGCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSSADHGPISQQIRELTSTFPIQ
LLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQASLRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRS
CETRNDVWQARDGFLRRQQQALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS
ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL

Sequences:

>Translated_272_residues
MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSSADHGPISQQIRELTSTFPIQ
LLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQASLRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRS
CETRNDVWQARDGFLRRQQQALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS
ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL
>Mature_272_residues
MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSSADHGPISQQIRELTSTFPIQ
LLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQASLRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRS
CETRNDVWQARDGFLRRQQQALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS
ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29796; Mature: 29796

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSS
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHC
ADHGPISQQIRELTSTFPIQLLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQAS
CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRSCETRNDVWQARDGFLRRQQQ
HCCCCCHHHHHHCCCEEEECCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEECCCCCCCCCHHHHHH
ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL
HCCCCCCCCEECHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSS
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHC
ADHGPISQQIRELTSTFPIQLLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQAS
CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRSCETRNDVWQARDGFLRRQQQ
HCCCCCHHHHHHCCCEEEECCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEECCCCCCCCCHHHHHH
ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL
HCCCCCCCCEECHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA