| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897447
Identifier: 159897447
GI number: 159897447
Start: 1049889
End: 1050707
Strand: Direct
Name: 159897447
Synonym: Haur_0918
Alternate gene names: NA
Gene position: 1049889-1050707 (Clockwise)
Preceding gene: 159897446
Following gene: 159897448
Centisome position: 16.54
GC content: 54.58
Gene sequence:
>819_bases ATGGATCAACTTTATTCAACCCTTGTGGCAACCCATCAGCAATGGCTGTTTGCCCAAGGTTTACACGAAAATCGCTCAGC TCGCTTGCTTTTGGTGACCGATGCAGTGATGGCGCAGGCACTCTTGGCTCGCTTGGGGCAACTGCCCTTAGCCCAGGTGA CCGTTGCCGCCTTATCCAGCGCCGATCATGGCCCAATTTCACAACAGATTCGCGAATTGACCAGCACGTTTCCAATTCAG CTGCTAGCGCGACCCTTCGCTGCTGGTGGTTTGGGCTTGCTGCTCAGTCGCTATCACGCCGCTGCATTAATCACCCAGCG GCCTTATCCGGTAGTAGCCGAAGCCCTGAATCAAGCCAGTTTACGGGCTGCCACGCCATGGACTGCGCTCAGTCTGTGGG GCGCACAAATTACCTTGGGGCCGACGATTTTGCCCAATCACACCGCCTGTTATGCCTGCTATCAAGCGCGATTACGCTCG TGCGAAACCCGCAATGATGTCTGGCAGGCGCGTGATGGCTTTTTGCGGCGGCAACAACAAGCGTTATTTCAGCCCTCGCT GGCGGCGCTCAATCAATTGGCTGCTAGCTATGGCTTGGTCGAAATCGAGCGCTTATTGCTTGGCCAACAACCACCGTTGG CGCTGGGCCGCGAAGTTCAATGGGATACATTCAATCTTGGCGTGAGCCGCAATCATGTTGAGCCATTTGAAAACTGTTCA GCCTGTGGTGGTCAGCAAAATACTACTTGGATTGGCCGTGATCAATTAGCTCAGGTGGTGGCCAAATTAAGCTTGCAAGC CCGCGAGGTGGCACTATGA
Upstream 100 bases:
>100_bases GCTTATATAGCGTGCCGGAGCGCATGGGCTACCCAGTTTTGGCCGAAGCTGAATTAAACCATTGGCCTCAGCCATTTGCC TAGTTTGAAAGGATTGCCCG
Downstream 100 bases:
>100_bases CCCAGGCAATTGATTTACACAGCCAACTCCAGAGCGATCCGCAGGTGCAACTTCCAACTCGCCCACGGATCTCCGATGAA ATTGCCCGAGTTTGGCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSSADHGPISQQIRELTSTFPIQ LLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQASLRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRS CETRNDVWQARDGFLRRQQQALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL
Sequences:
>Translated_272_residues MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSSADHGPISQQIRELTSTFPIQ LLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQASLRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRS CETRNDVWQARDGFLRRQQQALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL >Mature_272_residues MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSSADHGPISQQIRELTSTFPIQ LLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQASLRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRS CETRNDVWQARDGFLRRQQQALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29796; Mature: 29796
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSS CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHC ADHGPISQQIRELTSTFPIQLLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQAS CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRSCETRNDVWQARDGFLRRQQQ HCCCCCHHHHHHCCCEEEECCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEECCCCCCCCCHHHHHH ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL HCCCCCCCCEECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDQLYSTLVATHQQWLFAQGLHENRSARLLLVTDAVMAQALLARLGQLPLAQVTVAALSS CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHC ADHGPISQQIRELTSTFPIQLLARPFAAGGLGLLLSRYHAAALITQRPYPVVAEALNQAS CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LRAATPWTALSLWGAQITLGPTILPNHTACYACYQARLRSCETRNDVWQARDGFLRRQQQ HCCCCCHHHHHHCCCEEEECCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALFQPSLAALNQLAASYGLVEIERLLLGQQPPLALGREVQWDTFNLGVSRNHVEPFENCS HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEECCCCCCCCCHHHHHH ACGGQQNTTWIGRDQLAQVVAKLSLQAREVAL HCCCCCCCCEECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA