Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yigI [C]

Identifier: 159897433

GI number: 159897433

Start: 1036366

End: 1036791

Strand: Reverse

Name: yigI [C]

Synonym: Haur_0904

Alternate gene names: 159897433

Gene position: 1036791-1036366 (Counterclockwise)

Preceding gene: 159897459

Following gene: 159897432

Centisome position: 16.34

GC content: 47.89

Gene sequence:

>426_bases
ATGAGTGATGATCTAACCGCTATCGGTCAGCAGATTTTAGCTAGTCAGCCTTTCAGCCAGTTGCTCAAAGCCCAAATTAG
CGAATTTCGCCAAGGCTACGCCGAATTACGCTTGAAGATTAACCCTGAGCTAACCCAACAATTTGGCTTTGTCCATGGTG
GCGTGCTCAGCTATGCCGCCGATAACGCCATTACCTTTGCTGGTGGCTCGGTTTTGGGCTTGGAAGTCGTCACTGCTGAA
TACAAAATCAATTATGTCAAACCAGCTCAAGACCAAGAACTGATTGCTCGTGCCAGTGTTTTGAGCAGCGGCAGTCGTCA
GGCCGTTTGCCAATGTTTGGTTTATTGCCAAGACGAGCAAAATGAAACCTTGGTTGCAGTTGCCCAAGGCACGATTATGA
CCCTCAGCAGCAAACGCTCATTATAA

Upstream 100 bases:

>100_bases
CGCGCACCAACACTTCGGCCAAATCGACAGCATCTTCAACCACCAAAATTGTCGGCACATGCTCAGCCATCGCCAAATCC
TTATTCTGTGTGAGGTTCAA

Downstream 100 bases:

>100_bases
TTAGCTTATCGCCTGTAGTTCCCTCACCCCCAACCCCTCTCCCACTGCGGCGGGCGAGGGGAGTTCTAAGCCTCATGCCG
GAGGTTTCCCCATTGCCTGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase; Thioesterase Family Protein; Phenylacetic Acid Degradation Protein PaaI; Thioesterase/Thiol Ester Dehydrase-Isomerase; Thioesterase Superfamily; Conserved Domain Protein; Domain 1 Protein; Phenylacetic Acid Degradation Protein PaaD

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSDDLTAIGQQILASQPFSQLLKAQISEFRQGYAELRLKINPELTQQFGFVHGGVLSYAADNAITFAGGSVLGLEVVTAE
YKINYVKPAQDQELIARASVLSSGSRQAVCQCLVYCQDEQNETLVAVAQGTIMTLSSKRSL

Sequences:

>Translated_141_residues
MSDDLTAIGQQILASQPFSQLLKAQISEFRQGYAELRLKINPELTQQFGFVHGGVLSYAADNAITFAGGSVLGLEVVTAE
YKINYVKPAQDQELIARASVLSSGSRQAVCQCLVYCQDEQNETLVAVAQGTIMTLSSKRSL
>Mature_140_residues
SDDLTAIGQQILASQPFSQLLKAQISEFRQGYAELRLKINPELTQQFGFVHGGVLSYAADNAITFAGGSVLGLEVVTAEY
KINYVKPAQDQELIARASVLSSGSRQAVCQCLVYCQDEQNETLVAVAQGTIMTLSSKRSL

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15262; Mature: 15130

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDLTAIGQQILASQPFSQLLKAQISEFRQGYAELRLKINPELTQQFGFVHGGVLSYAA
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHCCCCCHHHHHHC
DNAITFAGGSVLGLEVVTAEYKINYVKPAQDQELIARASVLSSGSRQAVCQCLVYCQDEQ
CCEEEECCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
NETLVAVAQGTIMTLSSKRSL
CCEEEEEECCEEEEECCCCCC
>Mature Secondary Structure 
SDDLTAIGQQILASQPFSQLLKAQISEFRQGYAELRLKINPELTQQFGFVHGGVLSYAA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHCCCCCHHHHHHC
DNAITFAGGSVLGLEVVTAEYKINYVKPAQDQELIARASVLSSGSRQAVCQCLVYCQDEQ
CCEEEECCCCEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
NETLVAVAQGTIMTLSSKRSL
CCEEEEEECCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA