Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897345

Identifier: 159897345

GI number: 159897345

Start: 924392

End: 924958

Strand: Reverse

Name: 159897345

Synonym: Haur_0816

Alternate gene names: NA

Gene position: 924958-924392 (Counterclockwise)

Preceding gene: 159897347

Following gene: 159897344

Centisome position: 14.57

GC content: 44.97

Gene sequence:

>567_bases
ATGAGCATTATGATTTTACTTGTGCTAGGTTTATGTGTTTTGGGTTTCTATATTCATGTGGGCATCATTTTTAATCGGGT
GGTGCAATTAGCTCAACAGCGCTCAGATTTGCGCACTTCAGCTTGGCTACTGCTGGTTAATTTAGCCGAACCCTTTATCA
TGGGGGTTTGGCTGCTGATTCAATTAATATACTTCGATTTCGAGTCGCTGATTGGTTCAGTTGGCGAGCCTTTGGCAGCA
ACCTCAAGCTTTTTTACCTACTACTGGCCAATGGCCCTGTTGCTGATTGGAATTCCAGTAATCGCCTTATTATTTATCCC
TCAAGCGCAAGTGCGGGCAACTGCTATCCGCAGCCTCTGGACGGGAGCAATGCGCTTAGTCATGGTCTGGTTGTGCTTCA
ATTTCATTATGGTTGGAGCGACGATTTTGATTGCGATTGGCTTAAGCATCTGGTCGTTGCGGCTGATTAATAGCTATTAC
AAATCATTAATGGCCCAATCGTCACTTGCCGTTGTGTTCGATCAGCATGGCCTTGCGATTCAAGCGATTGTTCCATCGAT
TGAGTAA

Upstream 100 bases:

>100_bases
TAGACCATAAGAGGTATTGATTTAACATAACCTAGCCTGCTAAGATGATTAAACTAAATTGAGCAAGATTAGAGTTGCCA
ATCATCACAAGGAGTAGGCG

Downstream 100 bases:

>100_bases
ACCCCACGTTCTCTCTAGGTTTGTTTGCAGGGATTTTTGGGCTAAATCGCTATACTGGCCTGCTTTTGAACAACCTATTT
GAGCATTAATGTACGCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLIQLIYFDFESLIGSVGEPLAA
TSSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLWTGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYY
KSLMAQSSLAVVFDQHGLAIQAIVPSIE

Sequences:

>Translated_188_residues
MSIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLIQLIYFDFESLIGSVGEPLAA
TSSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLWTGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYY
KSLMAQSSLAVVFDQHGLAIQAIVPSIE
>Mature_187_residues
SIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLIQLIYFDFESLIGSVGEPLAAT
SSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLWTGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYYK
SLMAQSSLAVVFDQHGLAIQAIVPSIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20985; Mature: 20853

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLIYFDFESLIGSVGEPLAATSSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLW
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYYKSLMAQSSLAVVFDQHGLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCH
QAIVPSIE
HHHCCCCC
>Mature Secondary Structure 
SIMILLVLGLCVLGFYIHVGIIFNRVVQLAQQRSDLRTSAWLLLVNLAEPFIMGVWLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLIYFDFESLIGSVGEPLAATSSFFTYYWPMALLLIGIPVIALLFIPQAQVRATAIRSLW
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TGAMRLVMVWLCFNFIMVGATILIAIGLSIWSLRLINSYYKSLMAQSSLAVVFDQHGLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCH
QAIVPSIE
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA