| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897340
Identifier: 159897340
GI number: 159897340
Start: 919650
End: 920399
Strand: Reverse
Name: 159897340
Synonym: Haur_0811
Alternate gene names: NA
Gene position: 920399-919650 (Counterclockwise)
Preceding gene: 159897341
Following gene: 159897338
Centisome position: 14.5
GC content: 29.07
Gene sequence:
>750_bases TTGGATGGAGTTTCTATGTATCCTCAGGCAAACTTTACTCCTAGTAGTACTCAAACCAATACGAACTCAAATGAATCGTT AATACTCAAGAAAAATACGGTTCAAGAAATCCGTACCGATATTATTCAAATTCAAGGAAAAAGGCTTATATTTGGGAATA CTGTATACCAAATACCTAATATTGCAGGCTTTTCAACAGCTAAGATCATTAATAAATTCCCTTGGATGTGGTGTCTAATT ATTATGATTTTACTCCTTATCAACAAAGATATTTTTTTCAGTGATTTTGGCAGAAATGACACAGAATCTATATCTACAAT AATAAATTCATTACTTGTATTATCATTATTTGGATTAATTTTCTATTGGGCTTCTATGCCTAATAAGTATGGATTATTAA TTATTTCCAGTGCAGGATCAAATTTATCATCAATAATAATCCATGAAGACAAGAAATTCATTGATAAAGTCATAAAAGTA CTATCTTTAAATATTGACAGTAGCTACGAAAAATATTATATTATAAACTTTAATAAAAAAACAATTCACCAATCTAATAC GAGTATGCCTAATATAAATTTCACCGATACTACAATTAACGATTCCAATCTGAGTATGTTCAATGACATTGATGGCAATC AAGAACAATCAAATACTAATTATACTAAAAAACGTCGTTCCATTCGCCGAGGCCCCAGACAACGAAAAAATCAAGAACAA TCAAATAACAATTATACTAAAAATCCTTAA
Upstream 100 bases:
>100_bases TCAATGGTCGATAGCCTTTTTTTAGGGCTTTGATATTAGAAATACTATATTGACTTAGCAATAATCCTTTGTTAGGATAA GTTAATTTTATAATCTGAGT
Downstream 100 bases:
>100_bases TAATTATAAATGATTCTTCTAAAAAGAAACATAATATCATCAATCTGTGCTAATCTGTGGCTAAAATTAAGCTGAAGGAT GCCAGCCTAAAACTTAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MDGVSMYPQANFTPSSTQTNTNSNESLILKKNTVQEIRTDIIQIQGKRLIFGNTVYQIPNIAGFSTAKIINKFPWMWCLI IMILLLINKDIFFSDFGRNDTESISTIINSLLVLSLFGLIFYWASMPNKYGLLIISSAGSNLSSIIIHEDKKFIDKVIKV LSLNIDSSYEKYYIINFNKKTIHQSNTSMPNINFTDTTINDSNLSMFNDIDGNQEQSNTNYTKKRRSIRRGPRQRKNQEQ SNNNYTKNP
Sequences:
>Translated_249_residues MDGVSMYPQANFTPSSTQTNTNSNESLILKKNTVQEIRTDIIQIQGKRLIFGNTVYQIPNIAGFSTAKIINKFPWMWCLI IMILLLINKDIFFSDFGRNDTESISTIINSLLVLSLFGLIFYWASMPNKYGLLIISSAGSNLSSIIIHEDKKFIDKVIKV LSLNIDSSYEKYYIINFNKKTIHQSNTSMPNINFTDTTINDSNLSMFNDIDGNQEQSNTNYTKKRRSIRRGPRQRKNQEQ SNNNYTKNP >Mature_249_residues MDGVSMYPQANFTPSSTQTNTNSNESLILKKNTVQEIRTDIIQIQGKRLIFGNTVYQIPNIAGFSTAKIINKFPWMWCLI IMILLLINKDIFFSDFGRNDTESISTIINSLLVLSLFGLIFYWASMPNKYGLLIISSAGSNLSSIIIHEDKKFIDKVIKV LSLNIDSSYEKYYIINFNKKTIHQSNTSMPNINFTDTTINDSNLSMFNDIDGNQEQSNTNYTKKRRSIRRGPRQRKNQEQ SNNNYTKNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28566; Mature: 28566
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGVSMYPQANFTPSSTQTNTNSNESLILKKNTVQEIRTDIIQIQGKRLIFGNTVYQIPN CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCCEECCC IAGFSTAKIINKFPWMWCLIIMILLLINKDIFFSDFGRNDTESISTIINSLLVLSLFGLI CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH FYWASMPNKYGLLIISSAGSNLSSIIIHEDKKFIDKVIKVLSLNIDSSYEKYYIINFNKK HHHHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCHH TIHQSNTSMPNINFTDTTINDSNLSMFNDIDGNQEQSNTNYTKKRRSIRRGPRQRKNQEQ HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH SNNNYTKNP CCCCCCCCC >Mature Secondary Structure MDGVSMYPQANFTPSSTQTNTNSNESLILKKNTVQEIRTDIIQIQGKRLIFGNTVYQIPN CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEECCCCEECCC IAGFSTAKIINKFPWMWCLIIMILLLINKDIFFSDFGRNDTESISTIINSLLVLSLFGLI CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH FYWASMPNKYGLLIISSAGSNLSSIIIHEDKKFIDKVIKVLSLNIDSSYEKYYIINFNKK HHHHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEECCHH TIHQSNTSMPNINFTDTTINDSNLSMFNDIDGNQEQSNTNYTKKRRSIRRGPRQRKNQEQ HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH SNNNYTKNP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA