| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is cat2 [H]
Identifier: 159897338
GI number: 159897338
Start: 915957
End: 917243
Strand: Reverse
Name: cat2 [H]
Synonym: Haur_0809
Alternate gene names: 159897338
Gene position: 917243-915957 (Counterclockwise)
Preceding gene: 159897340
Following gene: 159897336
Centisome position: 14.45
GC content: 51.52
Gene sequence:
>1287_bases ATGCGTTACGTTTCAGCGAACGAAGCTGTTCAAGCGATTAAATCACACGATCGTGTGTTTATTCATAGTGTTGCCGCAGC ACCTCAACAATTAATTGCGGCTTTGGTTGCTCGCGCCGATGAATTACGCAGCGTCGAATTGGTGCATATTCATACCGAAG GGCCAGCACCATATACCGATCCCAAATATCGCGAAAGTTTTCATACCCGCGCGTTATTTATTGGCTCGAATATTCGGAGC GCCGTGGTAACTGGTGAAGCTGATTATGTTCCGGTCTTTTTGAGCGAAGTTCCAGGCTTGTTCCGGCGGGGAATTTTGCC GCTTGATATGGCATTAATTCAAGTTTCGCCACCTGATCAACATGGGTTTTGCTCGTTGGGCGTTTCGGTCGATGTCACCC GAGCAGCCGTCGAAGTTGCTCAATGTGTAATTGCCCAAATCAACCCGCATATGCCCCGCACCCATGGCGATGGCCACATT CATATCAATCGGATTAACTTTGCGGTTGAGGTCGATGAGCCAATTTATGAACATGCGCCAGCCGTTTTGAGTGATGTTGA ACGGGCGATTGGCCGCCATATTGCGGGCTTGGTCAGCGATGGCGCAACCTTGCAAATGGGTATCGGGGCGATTCCTGATG CCGTGCTAGCTTCATTAACCACCCACAAAAATTTGGGCATTCACACCGAAATGTTTTCCGATGGGATTATCGATTTGGTT GAACGCGGCATCATCAACGGACGCATGAAGAAAACCCACCCCGGCAAAATCGTTGGTGGTTTTATGATGGGCACGCGGCG ATTGTATGATTTCGTCGATGATAACCCGCAGATCGCCATGCTCGACATCACCTACATCAACGATACCAGCGTGATTCGGC GCAACCCCAATGTTACGGCAATCAACAGTGCGATTGAAGTGGATCTGACGGGCCAAGTCTGTGCTGATTCAATTGGCACG TTCCAGTATTCAGGGGTGGGCGGCCAAATGGACTTTATGCGCGGAGCAGCGCTCTCCGAGGGCGGCAAGCCAATTATTGC CCTGCCTTCAGCTACCCGTCGTGGCGAATCGCGGATTGTGCCAGTGCTGCACGAAGGCGCTAGCGTCGTGACCACTCGTG CCCACGTTCAATATATCGTCACTGAATATGGCGTAGCTTATTTGTATGGCAAAACCTTGCGCGAACGCGCTAAAGCCTTG ATCGATATTGCTCACCCTGACCATCGCGAAGCGCTCGAACGGGCCGCTTTAGAGCGGTTTCACGGCGAAGCCAGCCTGAA ACATTAG
Upstream 100 bases:
>100_bases TAACCCATTTCATGGCTCTTTTCACTTCGTGCTGGCAAGAAATCGGTCACAATAGAGATGTAGCCGAGGCTACACCAACC AACGATTTAGGGGGCTTAGT
Downstream 100 bases:
>100_bases TTAAAATCCCTCATCCCCGACCCCTCTCCCACTGCGGCGGGAGAAGGGGCGAACTTAACTGCGCACCACCAATTCTTTGG TTCATCGGTAGATGTCTGTT
Product: acetyl-CoA hydrolase/transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MRYVSANEAVQAIKSHDRVFIHSVAAAPQQLIAALVARADELRSVELVHIHTEGPAPYTDPKYRESFHTRALFIGSNIRS AVVTGEADYVPVFLSEVPGLFRRGILPLDMALIQVSPPDQHGFCSLGVSVDVTRAAVEVAQCVIAQINPHMPRTHGDGHI HINRINFAVEVDEPIYEHAPAVLSDVERAIGRHIAGLVSDGATLQMGIGAIPDAVLASLTTHKNLGIHTEMFSDGIIDLV ERGIINGRMKKTHPGKIVGGFMMGTRRLYDFVDDNPQIAMLDITYINDTSVIRRNPNVTAINSAIEVDLTGQVCADSIGT FQYSGVGGQMDFMRGAALSEGGKPIIALPSATRRGESRIVPVLHEGASVVTTRAHVQYIVTEYGVAYLYGKTLRERAKAL IDIAHPDHREALERAALERFHGEASLKH
Sequences:
>Translated_428_residues MRYVSANEAVQAIKSHDRVFIHSVAAAPQQLIAALVARADELRSVELVHIHTEGPAPYTDPKYRESFHTRALFIGSNIRS AVVTGEADYVPVFLSEVPGLFRRGILPLDMALIQVSPPDQHGFCSLGVSVDVTRAAVEVAQCVIAQINPHMPRTHGDGHI HINRINFAVEVDEPIYEHAPAVLSDVERAIGRHIAGLVSDGATLQMGIGAIPDAVLASLTTHKNLGIHTEMFSDGIIDLV ERGIINGRMKKTHPGKIVGGFMMGTRRLYDFVDDNPQIAMLDITYINDTSVIRRNPNVTAINSAIEVDLTGQVCADSIGT FQYSGVGGQMDFMRGAALSEGGKPIIALPSATRRGESRIVPVLHEGASVVTTRAHVQYIVTEYGVAYLYGKTLRERAKAL IDIAHPDHREALERAALERFHGEASLKH >Mature_428_residues MRYVSANEAVQAIKSHDRVFIHSVAAAPQQLIAALVARADELRSVELVHIHTEGPAPYTDPKYRESFHTRALFIGSNIRS AVVTGEADYVPVFLSEVPGLFRRGILPLDMALIQVSPPDQHGFCSLGVSVDVTRAAVEVAQCVIAQINPHMPRTHGDGHI HINRINFAVEVDEPIYEHAPAVLSDVERAIGRHIAGLVSDGATLQMGIGAIPDAVLASLTTHKNLGIHTEMFSDGIIDLV ERGIINGRMKKTHPGKIVGGFMMGTRRLYDFVDDNPQIAMLDITYINDTSVIRRNPNVTAINSAIEVDLTGQVCADSIGT FQYSGVGGQMDFMRGAALSEGGKPIIALPSATRRGESRIVPVLHEGASVVTTRAHVQYIVTEYGVAYLYGKTLRERAKAL IDIAHPDHREALERAALERFHGEASLKH
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=475, Percent_Identity=24.6315789473684, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI32563853, Length=426, Percent_Identity=51.6431924882629, Blast_Score=450, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17538151, Length=428, Percent_Identity=49.0654205607477, Blast_Score=411, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6319456, Length=242, Percent_Identity=28.9256198347107, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI21358615, Length=421, Percent_Identity=53.4441805225653, Blast_Score=468, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 46553; Mature: 46553
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVSANEAVQAIKSHDRVFIHSVAAAPQQLIAALVARADELRSVELVHIHTEGPAPYTD CCCCCHHHHHHHHHHCCEEEEEHHHHCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC PKYRESFHTRALFIGSNIRSAVVTGEADYVPVFLSEVPGLFRRGILPLDMALIQVSPPDQ CHHHHHHCCEEEEECCCCCEEEEECCCCCEEHHHHHCCHHHHCCCCCEEEEEEEECCCCC HGFCSLGVSVDVTRAAVEVAQCVIAQINPHMPRTHGDGHIHINRINFAVEVDEPIYEHAP CCEEEECCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHCC AVLSDVERAIGRHIAGLVSDGATLQMGIGAIPDAVLASLTTHKNLGIHTEMFSDGIIDLV HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHCHHHHHH ERGIINGRMKKTHPGKIVGGFMMGTRRLYDFVDDNPQIAMLDITYINDTSVIRRNPNVTA HHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCEEE INSAIEVDLTGQVCADSIGTFQYSGVGGQMDFMRGAALSEGGKPIIALPSATRRGESRIV ECCEEEEEECCHHHHCCCCCEEECCCCCCHHHHHCCHHCCCCCEEEECCCCCCCCCCCEE PVLHEGASVVTTRAHVQYIVTEYGVAYLYGKTLRERAKALIDIAHPDHREALERAALERF EEEECCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH HGEASLKH CCCCCCCC >Mature Secondary Structure MRYVSANEAVQAIKSHDRVFIHSVAAAPQQLIAALVARADELRSVELVHIHTEGPAPYTD CCCCCHHHHHHHHHHCCEEEEEHHHHCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC PKYRESFHTRALFIGSNIRSAVVTGEADYVPVFLSEVPGLFRRGILPLDMALIQVSPPDQ CHHHHHHCCEEEEECCCCCEEEEECCCCCEEHHHHHCCHHHHCCCCCEEEEEEEECCCCC HGFCSLGVSVDVTRAAVEVAQCVIAQINPHMPRTHGDGHIHINRINFAVEVDEPIYEHAP CCEEEECCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHCC AVLSDVERAIGRHIAGLVSDGATLQMGIGAIPDAVLASLTTHKNLGIHTEMFSDGIIDLV HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEHHHHHCHHHHHH ERGIINGRMKKTHPGKIVGGFMMGTRRLYDFVDDNPQIAMLDITYINDTSVIRRNPNVTA HHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCEEE INSAIEVDLTGQVCADSIGTFQYSGVGGQMDFMRGAALSEGGKPIIALPSATRRGESRIV ECCEEEEEECCHHHHCCCCCEEECCCCCCHHHHHCCHHCCCCCEEEECCCCCCCCCCCEE PVLHEGASVVTTRAHVQYIVTEYGVAYLYGKTLRERAKALIDIAHPDHREALERAALERF EEEECCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH HGEASLKH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]