Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897329

Identifier: 159897329

GI number: 159897329

Start: 904141

End: 905442

Strand: Reverse

Name: 159897329

Synonym: Haur_0800

Alternate gene names: NA

Gene position: 905442-904141 (Counterclockwise)

Preceding gene: 159897330

Following gene: 159897327

Centisome position: 14.27

GC content: 50.92

Gene sequence:

>1302_bases
ATGATCAATCGTCAGAGCGCCAAATTAATCGTTTTGCTCAGCGCATGCATCGCCTATAGCAGCTTGATCAGCGTTGTACT
GAATAGCCTTGATAGCGCTGGCGAGCAGCCAAGTGCGGTTTGGCGCTGGCCAATTTTCGTGTTTGGCACGATTACCATGG
TCAGTTTGCGAATGCGTTTGCGTCAGCGCGGCGCGATCATTACTGCTGCCGCTGCGATTGGCATCGCCATGGTTGGCTGG
CTCTGGATTCGCAGCGAACGCAGTGGCCAAGAATTGGTCTTGAGTGGGTTTGGGGTGGGCTTTTTGATGTCGCGGGCGAT
CAATTCAGATCAATGGAATCACGATTGGTTGCAACAGCTCTTTTGGCGGGGACTGGGCGTATTGGTGGCGTTTGTGGCGC
TTGGCCCAGTTATGACTCGTGGCGCATTAGAACAGCCAGGTTTGCTGCAACTTTTTATTATTCAAGCCTTGGCGTTTGTA
GCGGCATGTTTATTTGCGATTATGCTTGATCAAAGCAACCAAGCTGAGTTGCAAACCCCGCCGATGTTGGGTTGGAGCAG
CCTATTTACCTTGGCACTCGTAGCGATTCCCTTGCTGTTGTTTGGGGTTGCCGACGGTCAACGCAGCATCTTAGGCCTAA
TTTTCGGCGCATTTATGGATGGTTTGGTGCTGATTGCTGGCGGTTTAGCTGTTGCTTTATCGTGGTTGGTTGGCTGGCTG
ATTCCCTCATTCAAGCCCAATCAACGCCCACCAATCGAGCCAAGCATGCCTGAAGCGGTTGATCCTTCAACATTAATGCC
TGAAGAAACCAGCCAAATCAGCTCGTGGCTCGGCGATCTGCTCAATATTGGGGTGGCAATTATTCTGATCATGATGATTG
CTTGGCTGATTTATCGAGTGGTACACTGGCTGCGCGATTTTGAAACTAAGCCGATTGCCCAAGGCGAAGTCGTCATCGAA
CAATCGATTTGGTCGTTCGATAGCCTGCGTGAGCAAATTTTGGAGCGTTTTCGGCGCAAAAAACCATGGAAGCTTGATAC
CAACGATCCCCAGGTACAAAAAGTGCGGCGAATTTATACTCAATTTTTGGAGCTGGGCGAAGATCATGGCCAACCACGCA
GCAAGCATCAAACAGCTCACGAATATGGGCGTGGGTATGCGCAACAACAGCCAACTAACGAGCCAGCGATTGCAGAACTA
ACAGCTATCTATACCCAAGCCCGCTATGCCGAGCAACTTGATGCCGAGGCCGTAGCTCGGGCTGAACAAGCCCTAAAAAC
GATCCAAAAACAGCAGCCCTAG

Upstream 100 bases:

>100_bases
GTTTACGCGAATATGGCTATGCCCCCGTTTGGCTCTATTTAGGCCAGCATGCACCAAAAGTTGCTGGAGTTAAGTTGATT
CATAGTCACCAGAGGGAGCC

Downstream 100 bases:

>100_bases
AAACGCCATTGCACGCTATGCCACAAGGCAAATTGATGGGGAATTGTTTGCGGTTTGCTGGTTGAAAGCATCATCGATAA
CGCTGGATAGCGTTCGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MINRQSAKLIVLLSACIAYSSLISVVLNSLDSAGEQPSAVWRWPIFVFGTITMVSLRMRLRQRGAIITAAAAIGIAMVGW
LWIRSERSGQELVLSGFGVGFLMSRAINSDQWNHDWLQQLFWRGLGVLVAFVALGPVMTRGALEQPGLLQLFIIQALAFV
AACLFAIMLDQSNQAELQTPPMLGWSSLFTLALVAIPLLLFGVADGQRSILGLIFGAFMDGLVLIAGGLAVALSWLVGWL
IPSFKPNQRPPIEPSMPEAVDPSTLMPEETSQISSWLGDLLNIGVAIILIMMIAWLIYRVVHWLRDFETKPIAQGEVVIE
QSIWSFDSLREQILERFRRKKPWKLDTNDPQVQKVRRIYTQFLELGEDHGQPRSKHQTAHEYGRGYAQQQPTNEPAIAEL
TAIYTQARYAEQLDAEAVARAEQALKTIQKQQP

Sequences:

>Translated_433_residues
MINRQSAKLIVLLSACIAYSSLISVVLNSLDSAGEQPSAVWRWPIFVFGTITMVSLRMRLRQRGAIITAAAAIGIAMVGW
LWIRSERSGQELVLSGFGVGFLMSRAINSDQWNHDWLQQLFWRGLGVLVAFVALGPVMTRGALEQPGLLQLFIIQALAFV
AACLFAIMLDQSNQAELQTPPMLGWSSLFTLALVAIPLLLFGVADGQRSILGLIFGAFMDGLVLIAGGLAVALSWLVGWL
IPSFKPNQRPPIEPSMPEAVDPSTLMPEETSQISSWLGDLLNIGVAIILIMMIAWLIYRVVHWLRDFETKPIAQGEVVIE
QSIWSFDSLREQILERFRRKKPWKLDTNDPQVQKVRRIYTQFLELGEDHGQPRSKHQTAHEYGRGYAQQQPTNEPAIAEL
TAIYTQARYAEQLDAEAVARAEQALKTIQKQQP
>Mature_433_residues
MINRQSAKLIVLLSACIAYSSLISVVLNSLDSAGEQPSAVWRWPIFVFGTITMVSLRMRLRQRGAIITAAAAIGIAMVGW
LWIRSERSGQELVLSGFGVGFLMSRAINSDQWNHDWLQQLFWRGLGVLVAFVALGPVMTRGALEQPGLLQLFIIQALAFV
AACLFAIMLDQSNQAELQTPPMLGWSSLFTLALVAIPLLLFGVADGQRSILGLIFGAFMDGLVLIAGGLAVALSWLVGWL
IPSFKPNQRPPIEPSMPEAVDPSTLMPEETSQISSWLGDLLNIGVAIILIMMIAWLIYRVVHWLRDFETKPIAQGEVVIE
QSIWSFDSLREQILERFRRKKPWKLDTNDPQVQKVRRIYTQFLELGEDHGQPRSKHQTAHEYGRGYAQQQPTNEPAIAEL
TAIYTQARYAEQLDAEAVARAEQALKTIQKQQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48286; Mature: 48286

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA