| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897330
Identifier: 159897330
GI number: 159897330
Start: 905439
End: 906626
Strand: Reverse
Name: 159897330
Synonym: Haur_0801
Alternate gene names: NA
Gene position: 906626-905439 (Counterclockwise)
Preceding gene: 159897331
Following gene: 159897329
Centisome position: 14.29
GC content: 51.26
Gene sequence:
>1188_bases ATGAAAGGGCGACGAGCAGGCTTATTTGTTTTGGTCTTGCTCTTGATCATTGGCTTGCTAAGCGATGTAACGTTGTTGCC GTTGGTCGCGATGCTGGGGATTATGGCCTTGCTCGCGGTCGAATTATGGGAATGGCGCATGTTTAAGCATGTTGATTATC AACGTGAACTAGGCCATACCCATCTGTTCCCCGACAACCGCACAACCCTTAGCATTACCCTGCGCAATCGCAAATTTTTG CCCTTGCCATTTGTTAATTTGCACGATTTGGTTCCAGTAGGCATCACGCTTGAGCAGATTGAAACCCAACCTGCTGCTAG CCCCAATTATCGGGTGCTAGCGCGGGCATTTGGCATCAGCAGTTATCAGCAAGTAACCCGCCAATATACAATTTTGTGCC CACAGCGCGGTTTGCACCGTTTTGGCCCAGCCAATTTGAGTGCTAGCGATCCGCTTGGGCTGAGTATTAGTCGCGCAACA ATTAATGAGATTGATCGCTTGATCGTCTACCCTCGCTTGTTAACTGAGCCAGAATTAGGCTTGCCGTTACGCGAGTTATT GGGCACGATTCGCGCCTCGCAGCGCTTATTGACCGACCCTGTTGTGCCGATTGGTATCCGCGATTATACCCAAAGCGACC CGCTCAAAAGCATTCACTGGACGGCGACAGCGCGGCGCGGCCAATTACAAACTCGCATTTATGAGCCAGTTACGGCGCTG ACCGTGATGTGTATTCTTGATATCGAAACGATTGTGCCATCCTATCTTGGGGTGAATAAATTTCAGGGCGAACGTTTAAT TAGTATGGCGGCAACGGTTTGTAGCGCTTTACACAAAGCTGGCCATGCGATTGGTTTATGGTCGAATGCCGCGCTGGTTG AGGGCAACACGGCCATTCAGCTGCCGCCCAATCGTAGCCCCAAACAGGCCAGCGCCATCTTGGAAGTATTGGCCCAAATG TCGCTCTACTCGCGGCTAGAAATTGCCAAATTTATTGGGCGTGAACAATCACGCTTACCGCTAGGCGCGACGGTTTTGCT GATTAGTGCGGTGGATACGCCGGCTCATCGCAGCGCCTTGGCCCGTTTACGCGAATATGGCTATGCCCCCGTTTGGCTCT ATTTAGGCCAGCATGCACCAAAAGTTGCTGGAGTTAAGTTGATTCATAGTCACCAGAGGGAGCCATGA
Upstream 100 bases:
>100_bases GGCTGATTTTGAATGCTGAAGCGCGGTTGGCACAACGCAGCCCTGAAAAAATTCTAGCCGATATTGTCAAAAGCATTGCA ACTCCAGTTGAGGAACGGGC
Downstream 100 bases:
>100_bases TCAATCGTCAGAGCGCCAAATTAATCGTTTTGCTCAGCGCATGCATCGCCTATAGCAGCTTGATCAGCGTTGTACTGAAT AGCCTTGATAGCGCTGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MKGRRAGLFVLVLLLIIGLLSDVTLLPLVAMLGIMALLAVELWEWRMFKHVDYQRELGHTHLFPDNRTTLSITLRNRKFL PLPFVNLHDLVPVGITLEQIETQPAASPNYRVLARAFGISSYQQVTRQYTILCPQRGLHRFGPANLSASDPLGLSISRAT INEIDRLIVYPRLLTEPELGLPLRELLGTIRASQRLLTDPVVPIGIRDYTQSDPLKSIHWTATARRGQLQTRIYEPVTAL TVMCILDIETIVPSYLGVNKFQGERLISMAATVCSALHKAGHAIGLWSNAALVEGNTAIQLPPNRSPKQASAILEVLAQM SLYSRLEIAKFIGREQSRLPLGATVLLISAVDTPAHRSALARLREYGYAPVWLYLGQHAPKVAGVKLIHSHQREP
Sequences:
>Translated_395_residues MKGRRAGLFVLVLLLIIGLLSDVTLLPLVAMLGIMALLAVELWEWRMFKHVDYQRELGHTHLFPDNRTTLSITLRNRKFL PLPFVNLHDLVPVGITLEQIETQPAASPNYRVLARAFGISSYQQVTRQYTILCPQRGLHRFGPANLSASDPLGLSISRAT INEIDRLIVYPRLLTEPELGLPLRELLGTIRASQRLLTDPVVPIGIRDYTQSDPLKSIHWTATARRGQLQTRIYEPVTAL TVMCILDIETIVPSYLGVNKFQGERLISMAATVCSALHKAGHAIGLWSNAALVEGNTAIQLPPNRSPKQASAILEVLAQM SLYSRLEIAKFIGREQSRLPLGATVLLISAVDTPAHRSALARLREYGYAPVWLYLGQHAPKVAGVKLIHSHQREP >Mature_395_residues MKGRRAGLFVLVLLLIIGLLSDVTLLPLVAMLGIMALLAVELWEWRMFKHVDYQRELGHTHLFPDNRTTLSITLRNRKFL PLPFVNLHDLVPVGITLEQIETQPAASPNYRVLARAFGISSYQQVTRQYTILCPQRGLHRFGPANLSASDPLGLSISRAT INEIDRLIVYPRLLTEPELGLPLRELLGTIRASQRLLTDPVVPIGIRDYTQSDPLKSIHWTATARRGQLQTRIYEPVTAL TVMCILDIETIVPSYLGVNKFQGERLISMAATVCSALHKAGHAIGLWSNAALVEGNTAIQLPPNRSPKQASAILEVLAQM SLYSRLEIAKFIGREQSRLPLGATVLLISAVDTPAHRSALARLREYGYAPVWLYLGQHAPKVAGVKLIHSHQREP
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43927; Mature: 43927
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRRAGLFVLVLLLIIGLLSDVTLLPLVAMLGIMALLAVELWEWRMFKHVDYQRELGHT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC HLFPDNRTTLSITLRNRKFLPLPFVNLHDLVPVGITLEQIETQPAASPNYRVLARAFGIS CCCCCCCEEEEEEEECCEECCCCCCCHHHCCCCCEEHHHHCCCCCCCCCHHHHHHHHCCH SYQQVTRQYTILCPQRGLHRFGPANLSASDPLGLSISRATINEIDRLIVYPRLLTEPELG HHHHHHHHEEEECCCCCHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCC LPLRELLGTIRASQRLLTDPVVPIGIRDYTQSDPLKSIHWTATARRGQLQTRIYEPVTAL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH TVMCILDIETIVPSYLGVNKFQGERLISMAATVCSALHKAGHAIGLWSNAALVEGNTAIQ HHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCEEEE LPPNRSPKQASAILEVLAQMSLYSRLEIAKFIGREQSRLPLGATVLLISAVDTPAHRSAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHH ARLREYGYAPVWLYLGQHAPKVAGVKLIHSHQREP HHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKGRRAGLFVLVLLLIIGLLSDVTLLPLVAMLGIMALLAVELWEWRMFKHVDYQRELGHT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC HLFPDNRTTLSITLRNRKFLPLPFVNLHDLVPVGITLEQIETQPAASPNYRVLARAFGIS CCCCCCCEEEEEEEECCEECCCCCCCHHHCCCCCEEHHHHCCCCCCCCCHHHHHHHHCCH SYQQVTRQYTILCPQRGLHRFGPANLSASDPLGLSISRATINEIDRLIVYPRLLTEPELG HHHHHHHHEEEECCCCCHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCC LPLRELLGTIRASQRLLTDPVVPIGIRDYTQSDPLKSIHWTATARRGQLQTRIYEPVTAL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH TVMCILDIETIVPSYLGVNKFQGERLISMAATVCSALHKAGHAIGLWSNAALVEGNTAIQ HHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCEEEE LPPNRSPKQASAILEVLAQMSLYSRLEIAKFIGREQSRLPLGATVLLISAVDTPAHRSAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHH ARLREYGYAPVWLYLGQHAPKVAGVKLIHSHQREP HHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA