Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897317

Identifier: 159897317

GI number: 159897317

Start: 889415

End: 891352

Strand: Reverse

Name: 159897317

Synonym: Haur_0788

Alternate gene names: NA

Gene position: 891352-889415 (Counterclockwise)

Preceding gene: 159897320

Following gene: 159897316

Centisome position: 14.04

GC content: 49.43

Gene sequence:

>1938_bases
GTGGTTCGTCGTTTTTTTCGTTGTAGTTTGCTGCTGATGCTGGCCGTTGGAGCAATCGCTAGCCAGCATGCCACCCCGCT
GGCCGCCCAAAGCCCTCAGTCAAGCCCAAGCCAATTGGCAATTCGTGGTCAACTTGGCGGTGATAGCTCAACCATGGTCG
TTGCCGAACAAGCTGCTTATGTTGGCATCGGTCCACGGGTCGTAACCTACGATTTGCACAATCCCAATCAGCCAAATCTA
GCCAACCAAAGCAGCCTTTTACCCGCCACCGTGCAAGATTTGGCCTTAGGCGAGGGCTATTTGTACGCCGCCTTGGGCTA
TGGCCGTGAACATGGCTTGGCTACATTTTCCTTAGCCACTCCATTAACACCAACGCTTGTAAGTTTTTACCCGCTTGAAT
TATCGGCCATGAGTGTTTTCAGCTATCAAGATTATGTCTATGTGCAAGTTGATGATGGCTTGCAGGTGTTCGATTTGAGC
AATCCTAGCCAACCACAATTGGTCAATCAACTTAATCAATATGGCATTGCCGCCGCAACGGTTCAAGGCGATCATGTGTA
TCTCAATATTCAATCGTGGCTTTCGGGCTTCGATAGCTTGAATATCGTCGATTTGAGCACACCCATGACTCCAACGCTCA
AAGGTTCGATCGTGCTTGGCGATATTTTAGATATCGAAATTGCCGCTAATTATGCGTATGTCAATACTCAAATGGGCCTG
CGGGTGGTTGATATCAGCAATGGCAGCAACCCAAACATTATCAACCAAACCGATGATGTTGCTGGATTACAACTAACCGC
AAGTGGCAACACACTCACAATGATTGGGCTAGATTATGCCTTACACACGTGGGATATTACCAACCCAATCACGCCGACCG
AAATTGCTGCCAGCTCCGAAACGGTGCTTGGCTGGCCAACAGCCTTAATTGCCCAACAAAACCTTGGCTATGTGCTGACT
CGTTCAGGCCAAATTAATGTCTTCGATTGGAGCACTCGCCAAGCTCCCACGCGCATCAGTGCGACTGAAACCCCTGGCTG
CAAGGAAAATGTAGCCTTGCAAGTGGTTGGCGATTATGCCTATGTGGCCGATTGGGGCCGTGGTTTGTGCATTGTTGATG
TGCGCAATCCCCAACAACCAAGCGTGATTGGCCGCTTCGATTTAACCACCGATCGCAACGCCGTCACCGATATTGCCGTC
CAAGGCTCGTTGGTATATATGGTCGATTGGAGCCACGGAATTTATGTGATCGATGTCAGCGACCCAACCGAACCAACTCA
AGTCAGTTTCTTTGCAACCGCTGGCTTTCCAGCAGCAATTGCGGTCAATGGCCCGATGGTCTATGTTGGCGAATCGATCA
ACGATCAAGGCGTTGGTGGCAGTGTACGGATTTTCGATCTCAGCGATTTGGCCAATCCAGTTGAGCATAGTCAGTTCTAC
ACCAGCAAAGTCGCCCAATTAGCCGTGATCGATCAAACCGTGTATGTGGCCGACAACGAAGGCGGCCTGCGGATTCTCGA
TGTTAGCAATCCTGATAACATTCAGATGATCGGCCAATATGCTGAAAATTGGTTCGCCATGGATTTAGCGATTCAGGATG
AGTATGTGTATTTGGCGACGACTAGCGGCTTAGAAATTGTCGATATCAGCAACCCCAGCCAACCAATCCCAGCAGGCCGC
CTTGGCGATCGCTTGATTGATGGCATCGTTGTGGCGGGCGATAATGCGTATATTGGTGAAAATGGTAGCATTCGCCAAAT
CGATATCAGCCAACCGAGCAACCCTCAAGTTGTAGCCGAAACCCTGCTAGCTCGCGATTCATGGATTCTACCAGCGCTGC
ATGGTGGAGAGATTGTAGGCTTGAGCTATCATGGTGGTGGCATGTTCGTACTTGAGCCAGAATATCAATTATTTTTGCCT
GTAATCAGCAAAAACTAA

Upstream 100 bases:

>100_bases
ACGCTGTTTTGAGCGAAGCACGAGGGGAATTTGGTTGCGGTTAACACCAGATCCTCATTCTTGACGCAGTATTCGGGACA
TATTGCCTTTGGAGGTACGA

Downstream 100 bases:

>100_bases
TTAAGCATTGAATAACGAACTGCTGGCGCATAATCTGCTATGGATATGCGCCAGCAGTGCTTTTTTAAGCATTTTGCTTA
ACACTTGCTTATTTTGATTA

Product: LVIVD repeat-containing protein

Products: NA

Alternate protein names: Outer Membrane Adhesin Like Proteiin; LVIVD Repeat Protein; Peptidase M; Lipoprotein

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MVRRFFRCSLLLMLAVGAIASQHATPLAAQSPQSSPSQLAIRGQLGGDSSTMVVAEQAAYVGIGPRVVTYDLHNPNQPNL
ANQSSLLPATVQDLALGEGYLYAALGYGREHGLATFSLATPLTPTLVSFYPLELSAMSVFSYQDYVYVQVDDGLQVFDLS
NPSQPQLVNQLNQYGIAAATVQGDHVYLNIQSWLSGFDSLNIVDLSTPMTPTLKGSIVLGDILDIEIAANYAYVNTQMGL
RVVDISNGSNPNIINQTDDVAGLQLTASGNTLTMIGLDYALHTWDITNPITPTEIAASSETVLGWPTALIAQQNLGYVLT
RSGQINVFDWSTRQAPTRISATETPGCKENVALQVVGDYAYVADWGRGLCIVDVRNPQQPSVIGRFDLTTDRNAVTDIAV
QGSLVYMVDWSHGIYVIDVSDPTEPTQVSFFATAGFPAAIAVNGPMVYVGESINDQGVGGSVRIFDLSDLANPVEHSQFY
TSKVAQLAVIDQTVYVADNEGGLRILDVSNPDNIQMIGQYAENWFAMDLAIQDEYVYLATTSGLEIVDISNPSQPIPAGR
LGDRLIDGIVVAGDNAYIGENGSIRQIDISQPSNPQVVAETLLARDSWILPALHGGEIVGLSYHGGGMFVLEPEYQLFLP
VISKN

Sequences:

>Translated_645_residues
MVRRFFRCSLLLMLAVGAIASQHATPLAAQSPQSSPSQLAIRGQLGGDSSTMVVAEQAAYVGIGPRVVTYDLHNPNQPNL
ANQSSLLPATVQDLALGEGYLYAALGYGREHGLATFSLATPLTPTLVSFYPLELSAMSVFSYQDYVYVQVDDGLQVFDLS
NPSQPQLVNQLNQYGIAAATVQGDHVYLNIQSWLSGFDSLNIVDLSTPMTPTLKGSIVLGDILDIEIAANYAYVNTQMGL
RVVDISNGSNPNIINQTDDVAGLQLTASGNTLTMIGLDYALHTWDITNPITPTEIAASSETVLGWPTALIAQQNLGYVLT
RSGQINVFDWSTRQAPTRISATETPGCKENVALQVVGDYAYVADWGRGLCIVDVRNPQQPSVIGRFDLTTDRNAVTDIAV
QGSLVYMVDWSHGIYVIDVSDPTEPTQVSFFATAGFPAAIAVNGPMVYVGESINDQGVGGSVRIFDLSDLANPVEHSQFY
TSKVAQLAVIDQTVYVADNEGGLRILDVSNPDNIQMIGQYAENWFAMDLAIQDEYVYLATTSGLEIVDISNPSQPIPAGR
LGDRLIDGIVVAGDNAYIGENGSIRQIDISQPSNPQVVAETLLARDSWILPALHGGEIVGLSYHGGGMFVLEPEYQLFLP
VISKN
>Mature_645_residues
MVRRFFRCSLLLMLAVGAIASQHATPLAAQSPQSSPSQLAIRGQLGGDSSTMVVAEQAAYVGIGPRVVTYDLHNPNQPNL
ANQSSLLPATVQDLALGEGYLYAALGYGREHGLATFSLATPLTPTLVSFYPLELSAMSVFSYQDYVYVQVDDGLQVFDLS
NPSQPQLVNQLNQYGIAAATVQGDHVYLNIQSWLSGFDSLNIVDLSTPMTPTLKGSIVLGDILDIEIAANYAYVNTQMGL
RVVDISNGSNPNIINQTDDVAGLQLTASGNTLTMIGLDYALHTWDITNPITPTEIAASSETVLGWPTALIAQQNLGYVLT
RSGQINVFDWSTRQAPTRISATETPGCKENVALQVVGDYAYVADWGRGLCIVDVRNPQQPSVIGRFDLTTDRNAVTDIAV
QGSLVYMVDWSHGIYVIDVSDPTEPTQVSFFATAGFPAAIAVNGPMVYVGESINDQGVGGSVRIFDLSDLANPVEHSQFY
TSKVAQLAVIDQTVYVADNEGGLRILDVSNPDNIQMIGQYAENWFAMDLAIQDEYVYLATTSGLEIVDISNPSQPIPAGR
LGDRLIDGIVVAGDNAYIGENGSIRQIDISQPSNPQVVAETLLARDSWILPALHGGEIVGLSYHGGGMFVLEPEYQLFLP
VISKN

Specific function: Unknown

COG id: COG5276

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69348; Mature: 69348

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRFFRCSLLLMLAVGAIASQHATPLAAQSPQSSPSQLAIRGQLGGDSSTMVVAEQAAY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCEE
VGIGPRVVTYDLHNPNQPNLANQSSLLPATVQDLALGEGYLYAALGYGREHGLATFSLAT
EECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECC
PLTPTLVSFYPLELSAMSVFSYQDYVYVQVDDGLQVFDLSNPSQPQLVNQLNQYGIAAAT
CCCCHHHEEEEEEEEEEEEEEECCEEEEEECCCEEEEECCCCCCCHHHHHHHHCCEEEEE
VQGDHVYLNIQSWLSGFDSLNIVDLSTPMTPTLKGSIVLGDILDIEIAANYAYVNTQMGL
EECCEEEEEHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCE
RVVDISNGSNPNIINQTDDVAGLQLTASGNTLTMIGLDYALHTWDITNPITPTEIAASSE
EEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCHHCCCCCC
TVLGWPTALIAQQNLGYVLTRSGQINVFDWSTRQAPTRISATETPGCKENVALQVVGDYA
EEEECCCCEEECCCCCEEEEECCEEEEEECCCCCCCCEEECCCCCCCCCCEEEEEEECEE
YVADWGRGLCIVDVRNPQQPSVIGRFDLTTDRNAVTDIAVQGSLVYMVDWSHGIYVIDVS
EEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEECC
DPTEPTQVSFFATAGFPAAIAVNGPMVYVGESINDQGVGGSVRIFDLSDLANPVEHSQFY
CCCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCEEEEEEHHHHCCHHHHHHHH
TSKVAQLAVIDQTVYVADNEGGLRILDVSNPDNIQMIGQYAENWFAMDLAIQDEYVYLAT
HHHHEEEEEEEEEEEEEECCCCEEEEECCCCCCEEEHHHHCCCEEEEEEEEECCEEEEEE
TSGLEIVDISNPSQPIPAGRLGDRLIDGIVVAGDNAYIGENGSIRQIDISQPSNPQVVAE
CCCEEEEECCCCCCCCCCCHHHHHHHCCEEEECCCEEECCCCCEEEEECCCCCCCHHHHH
TLLARDSWILPALHGGEIVGLSYHGGGMFVLEPEYQLFLPVISKN
HHHHCCCEEEEEECCCEEEEEEECCCEEEEECCCCEEEEEEECCC
>Mature Secondary Structure
MVRRFFRCSLLLMLAVGAIASQHATPLAAQSPQSSPSQLAIRGQLGGDSSTMVVAEQAAY
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCEE
VGIGPRVVTYDLHNPNQPNLANQSSLLPATVQDLALGEGYLYAALGYGREHGLATFSLAT
EECCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECC
PLTPTLVSFYPLELSAMSVFSYQDYVYVQVDDGLQVFDLSNPSQPQLVNQLNQYGIAAAT
CCCCHHHEEEEEEEEEEEEEEECCEEEEEECCCEEEEECCCCCCCHHHHHHHHCCEEEEE
VQGDHVYLNIQSWLSGFDSLNIVDLSTPMTPTLKGSIVLGDILDIEIAANYAYVNTQMGL
EECCEEEEEHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCE
RVVDISNGSNPNIINQTDDVAGLQLTASGNTLTMIGLDYALHTWDITNPITPTEIAASSE
EEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCHHCCCCCC
TVLGWPTALIAQQNLGYVLTRSGQINVFDWSTRQAPTRISATETPGCKENVALQVVGDYA
EEEECCCCEEECCCCCEEEEECCEEEEEECCCCCCCCEEECCCCCCCCCCEEEEEEECEE
YVADWGRGLCIVDVRNPQQPSVIGRFDLTTDRNAVTDIAVQGSLVYMVDWSHGIYVIDVS
EEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEECC
DPTEPTQVSFFATAGFPAAIAVNGPMVYVGESINDQGVGGSVRIFDLSDLANPVEHSQFY
CCCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCEEEEEEHHHHCCHHHHHHHH
TSKVAQLAVIDQTVYVADNEGGLRILDVSNPDNIQMIGQYAENWFAMDLAIQDEYVYLAT
HHHHEEEEEEEEEEEEEECCCCEEEEECCCCCCEEEHHHHCCCEEEEEEEEECCEEEEEE
TSGLEIVDISNPSQPIPAGRLGDRLIDGIVVAGDNAYIGENGSIRQIDISQPSNPQVVAE
CCCEEEEECCCCCCCCCCCHHHHHHHCCEEEECCCEEECCCCCEEEEECCCCCCCHHHHH
TLLARDSWILPALHGGEIVGLSYHGGGMFVLEPEYQLFLPVISKN
HHHHCCCEEEEEECCCEEEEEEECCCEEEEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA