Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897211
Identifier: 159897211
GI number: 159897211
Start: 783293
End: 783778
Strand: Direct
Name: 159897211
Synonym: Haur_0682
Alternate gene names: NA
Gene position: 783293-783778 (Clockwise)
Preceding gene: 159897210
Following gene: 159897216
Centisome position: 12.34
GC content: 52.67
Gene sequence:
>486_bases ATGCAGCAACCGACTTGGCACATTAATACGCATCAACAAACATGGCAAGTGGTTTGGTATGCCGCCGATGCCGAGCCAAC AGGCAAGGCCCATGGCTCGGCAGGCATTTGCCTTACTCCTGAGCAACACGTTATCGTGGTGAGCCAAAATGGCCTCGATT GGGATGTGCCTGCGGGACGCAGTGAAATTGGTGAATCGTGGGACGCAACTTTGCGGCGTGAAGTTGCTGAGGAAGCTTGT GCAAGCGTTCAATCTGCCGAGTTATTGGGCTTTTGCCAAAGCCAATGCCTGACGGGAGTTGAGCAAGACTTAGTGCTGGT GCGAAGTTTTTGGCTAGCCCAAGTTCAAATCCAGCCATGGCAACCCCAATTTGAAATTCGCCAACGCCGCATGATTGCAC TTGCTGAAATTTGGGACTACCTGCCACCGAGCTTTGTGCCAGTCTATCGCCATGTGTTGCAGGTAGCCCTGCTACTCAGG CGATAA
Upstream 100 bases:
>100_bases CATTTAGAGTTATTTAAGGCTCTACCAGAATCAACTCAACAGATAATTATAAAAATCTATGACTTTATTGCAAAGCTGAA TCCTAGCTAAAGGCCTAAGC
Downstream 100 bases:
>100_bases TTCCAATCCACGAAGAGAGTAGGCTATGGGCTATAGGCTATAGGCTGAAACACCCCAAAATGTTCCGCTAGCCAAAAGCC TTTACCCTATAGCCATTTTT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGRSEIGESWDATLRREVAEEAC ASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPWQPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLR R
Sequences:
>Translated_161_residues MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGRSEIGESWDATLRREVAEEAC ASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPWQPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLR R >Mature_161_residues MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGRSEIGESWDATLRREVAEEAC ASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPWQPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLR R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18359; Mature: 18359
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGR CCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCH SEIGESWDATLRREVAEEACASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPW HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCC QPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLRR CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGR CCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCH SEIGESWDATLRREVAEEACASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPW HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCC QPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLRR CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA