Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897211

Identifier: 159897211

GI number: 159897211

Start: 783293

End: 783778

Strand: Direct

Name: 159897211

Synonym: Haur_0682

Alternate gene names: NA

Gene position: 783293-783778 (Clockwise)

Preceding gene: 159897210

Following gene: 159897216

Centisome position: 12.34

GC content: 52.67

Gene sequence:

>486_bases
ATGCAGCAACCGACTTGGCACATTAATACGCATCAACAAACATGGCAAGTGGTTTGGTATGCCGCCGATGCCGAGCCAAC
AGGCAAGGCCCATGGCTCGGCAGGCATTTGCCTTACTCCTGAGCAACACGTTATCGTGGTGAGCCAAAATGGCCTCGATT
GGGATGTGCCTGCGGGACGCAGTGAAATTGGTGAATCGTGGGACGCAACTTTGCGGCGTGAAGTTGCTGAGGAAGCTTGT
GCAAGCGTTCAATCTGCCGAGTTATTGGGCTTTTGCCAAAGCCAATGCCTGACGGGAGTTGAGCAAGACTTAGTGCTGGT
GCGAAGTTTTTGGCTAGCCCAAGTTCAAATCCAGCCATGGCAACCCCAATTTGAAATTCGCCAACGCCGCATGATTGCAC
TTGCTGAAATTTGGGACTACCTGCCACCGAGCTTTGTGCCAGTCTATCGCCATGTGTTGCAGGTAGCCCTGCTACTCAGG
CGATAA

Upstream 100 bases:

>100_bases
CATTTAGAGTTATTTAAGGCTCTACCAGAATCAACTCAACAGATAATTATAAAAATCTATGACTTTATTGCAAAGCTGAA
TCCTAGCTAAAGGCCTAAGC

Downstream 100 bases:

>100_bases
TTCCAATCCACGAAGAGAGTAGGCTATGGGCTATAGGCTATAGGCTGAAACACCCCAAAATGTTCCGCTAGCCAAAAGCC
TTTACCCTATAGCCATTTTT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGRSEIGESWDATLRREVAEEAC
ASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPWQPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLR
R

Sequences:

>Translated_161_residues
MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGRSEIGESWDATLRREVAEEAC
ASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPWQPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLR
R
>Mature_161_residues
MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGRSEIGESWDATLRREVAEEAC
ASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPWQPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLR
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18359; Mature: 18359

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGR
CCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCH
SEIGESWDATLRREVAEEACASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPW
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCC
QPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLRR
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQQPTWHINTHQQTWQVVWYAADAEPTGKAHGSAGICLTPEQHVIVVSQNGLDWDVPAGR
CCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCH
SEIGESWDATLRREVAEEACASVQSAELLGFCQSQCLTGVEQDLVLVRSFWLAQVQIQPW
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCC
QPQFEIRQRRMIALAEIWDYLPPSFVPVYRHVLQVALLLRR
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA