Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897210
Identifier: 159897210
GI number: 159897210
Start: 781423
End: 783282
Strand: Direct
Name: 159897210
Synonym: Haur_0681
Alternate gene names: NA
Gene position: 781423-783282 (Clockwise)
Preceding gene: 159897209
Following gene: 159897211
Centisome position: 12.31
GC content: 33.49
Gene sequence:
>1860_bases ATGCAGCAAATTGAAACCTTATATCTACCAGATTCAGTCAAAAGCAGCTATCAAAATGTTGAAAACCAGCCACTTACTCA ACTCGATAGCCTCTCACGGGTCAATATTTTAGTTGGTGCAAATAATTCAGGTAAAAGCCGTTTTATGTGCTTGCTAACTG AAACAGCCAATTTTTCAATTCGAATAAGAGATGTCGATTTTATCAATCGTACTATAGAAAATGCTATTGATAAAATTATC AATATTTATACTTTCATAGGACACCCACAAATTAGCAGATATGATACTTCATTTCTTACACAATTAAAATCAAAGCTAAT AACTAAAAATAATACAAATACAAATAATAACTATCAAAACATTTTTGACGTATTTAATCATTTATCAGAATACAAATCAA TATACGAGCAACTTAAAGAAATCAAAAATATTTCAAAAGAAATAGTTGAAATATTAAAATCTACTCAATTAAATCTAACA AAGAATATCTATATTCCAACCCTTCGCGGCTTACGACCGCTCAATAATGCTTATAATGATTTTTATAAACAGCAAACCCT TGAAAGCTATTTTAAAGATGCTGAACATAAACCTGAAGTTTTTACGGGCTTAGGACTTTATACAGAACTACGAAGCTATC TCCTTGGTGATAATGCAAAACGAAAGAAAATTAAAGAGTATCAAGAGTTTATTTCACGTAGCTTGTTTGAAGGCCAAGAA GTTACTCTAATTCCCAGTGAAGAACAAAAGATTGTGGTGGTTAAAATTGGCAATGAGCTTGAGCGCCCAATCCATGAGCT TGGCGATGGGATTCAATCGGCAATTATTTTGACCTTTTTGCCATTTGTGAGTCTTGAGAATTGCATTTTCTTTATCGAGG AGCCGGAGCTTTTTCTGCACCCAAGTATGCAGCGCAAAATTCTGGAGTTCTATCATTCATTAGGTCGCCATCTATTCTTT ATGACTACCCATTCTAATCATTTGCTAGATATTACAATTGATATTCCTGAGATTTCAATCTATAGCTTTCGAAAATCGAT CACCAGCAGCGACGATGACCAAACACCGCAATTCGTTGTTGAGAATGTTGATAACAATCAGAGCAGCTCCTTAGAATTGT TAGGAGTACGAAATTCATCAGTCTTGTTGGTCAATGCCACAATTTGGGTTGAAGGGATAACCGACCGTTGGTATTTGCGT GAAATGCTCCAAATGTATATGAAAACTTTGCCAAATCCAAAACCCAAGCTCGAAGAAGATATTCATTATGCTTTTGTCGA ATATGGTGGTGGTAATATTACCAATTTTTCCTTTTTTGAAGAACAGGATAACGAAAAATTGATAAATATCAAAAATTTAT GTGCAAAAGCTATCTTAGTTATTGATCATGATGGAGAATCTAAAAAGAATCGAAAACAACAACTAAAAGATAAATTAGGA ACAGATTTAATTATCTTGCCTTGTCGTGAAATTGAAAATAGCCTACCACCGGAAGTTATTCGTTCAGTCGTAATTGAATA TGAGACATCTACTCAAAAACCAAACCCCGAAATAAATTCTTTTGCATATACAGATTACCAAAATGAATCGTTAGGGGATT TTATTGAAAATTATGTAATAAAAGGTGAGAAGCATCGTCGAGGTTCTTATAAAGCTGATTCAGGAACCATTACCGATAAA CTTGGTTTTTGCAAAAGAGCACTTAAGTATATTAATCCATTAACCGATGCAGAACTAGCAAAATTAGACACAGAGGAACG TCAATTGAGGCATTTAGAGTTATTTAAGGCTCTACCAGAATCAACTCAACAGATAATTATAAAAATCTATGACTTTATTG CAAAGCTGAATCCTAGCTAA
Upstream 100 bases:
>100_bases GGGTGGTTTTTTGGTTAATTCAGCAATCTGCCCGATTGACAATCAACCCGCGCCTGAATATAGTTGACAGTCAGCAGCCT TCAAGCCTTAGGGTAAATGT
Downstream 100 bases:
>100_bases AGGCCTAAGCATGCAGCAACCGACTTGGCACATTAATACGCATCAACAAACATGGCAAGTGGTTTGGTATGCCGCCGATG CCGAGCCAACAGGCAAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MQQIETLYLPDSVKSSYQNVENQPLTQLDSLSRVNILVGANNSGKSRFMCLLTETANFSIRIRDVDFINRTIENAIDKII NIYTFIGHPQISRYDTSFLTQLKSKLITKNNTNTNNNYQNIFDVFNHLSEYKSIYEQLKEIKNISKEIVEILKSTQLNLT KNIYIPTLRGLRPLNNAYNDFYKQQTLESYFKDAEHKPEVFTGLGLYTELRSYLLGDNAKRKKIKEYQEFISRSLFEGQE VTLIPSEEQKIVVVKIGNELERPIHELGDGIQSAIILTFLPFVSLENCIFFIEEPELFLHPSMQRKILEFYHSLGRHLFF MTTHSNHLLDITIDIPEISIYSFRKSITSSDDDQTPQFVVENVDNNQSSSLELLGVRNSSVLLVNATIWVEGITDRWYLR EMLQMYMKTLPNPKPKLEEDIHYAFVEYGGGNITNFSFFEEQDNEKLINIKNLCAKAILVIDHDGESKKNRKQQLKDKLG TDLIILPCREIENSLPPEVIRSVVIEYETSTQKPNPEINSFAYTDYQNESLGDFIENYVIKGEKHRRGSYKADSGTITDK LGFCKRALKYINPLTDAELAKLDTEERQLRHLELFKALPESTQQIIIKIYDFIAKLNPS
Sequences:
>Translated_619_residues MQQIETLYLPDSVKSSYQNVENQPLTQLDSLSRVNILVGANNSGKSRFMCLLTETANFSIRIRDVDFINRTIENAIDKII NIYTFIGHPQISRYDTSFLTQLKSKLITKNNTNTNNNYQNIFDVFNHLSEYKSIYEQLKEIKNISKEIVEILKSTQLNLT KNIYIPTLRGLRPLNNAYNDFYKQQTLESYFKDAEHKPEVFTGLGLYTELRSYLLGDNAKRKKIKEYQEFISRSLFEGQE VTLIPSEEQKIVVVKIGNELERPIHELGDGIQSAIILTFLPFVSLENCIFFIEEPELFLHPSMQRKILEFYHSLGRHLFF MTTHSNHLLDITIDIPEISIYSFRKSITSSDDDQTPQFVVENVDNNQSSSLELLGVRNSSVLLVNATIWVEGITDRWYLR EMLQMYMKTLPNPKPKLEEDIHYAFVEYGGGNITNFSFFEEQDNEKLINIKNLCAKAILVIDHDGESKKNRKQQLKDKLG TDLIILPCREIENSLPPEVIRSVVIEYETSTQKPNPEINSFAYTDYQNESLGDFIENYVIKGEKHRRGSYKADSGTITDK LGFCKRALKYINPLTDAELAKLDTEERQLRHLELFKALPESTQQIIIKIYDFIAKLNPS >Mature_619_residues MQQIETLYLPDSVKSSYQNVENQPLTQLDSLSRVNILVGANNSGKSRFMCLLTETANFSIRIRDVDFINRTIENAIDKII NIYTFIGHPQISRYDTSFLTQLKSKLITKNNTNTNNNYQNIFDVFNHLSEYKSIYEQLKEIKNISKEIVEILKSTQLNLT KNIYIPTLRGLRPLNNAYNDFYKQQTLESYFKDAEHKPEVFTGLGLYTELRSYLLGDNAKRKKIKEYQEFISRSLFEGQE VTLIPSEEQKIVVVKIGNELERPIHELGDGIQSAIILTFLPFVSLENCIFFIEEPELFLHPSMQRKILEFYHSLGRHLFF MTTHSNHLLDITIDIPEISIYSFRKSITSSDDDQTPQFVVENVDNNQSSSLELLGVRNSSVLLVNATIWVEGITDRWYLR EMLQMYMKTLPNPKPKLEEDIHYAFVEYGGGNITNFSFFEEQDNEKLINIKNLCAKAILVIDHDGESKKNRKQQLKDKLG TDLIILPCREIENSLPPEVIRSVVIEYETSTQKPNPEINSFAYTDYQNESLGDFIENYVIKGEKHRRGSYKADSGTITDK LGFCKRALKYINPLTDAELAKLDTEERQLRHLELFKALPESTQQIIIKIYDFIAKLNPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71682; Mature: 71682
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQIETLYLPDSVKSSYQNVENQPLTQLDSLSRVNILVGANNSGKSRFMCLLTETANFSI CCCCCEEECCHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCCCCCCEEEEEEEECCCEEE RIRDVDFINRTIENAIDKIINIYTFIGHPQISRYDTSFLTQLKSKLITKNNTNTNNNYQN EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH IFDVFNHLSEYKSIYEQLKEIKNISKEIVEILKSTQLNLTKNIYIPTLRGLRPLNNAYND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHH FYKQQTLESYFKDAEHKPEVFTGLGLYTELRSYLLGDNAKRKKIKEYQEFISRSLFEGQE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCE VTLIPSEEQKIVVVKIGNELERPIHELGDGIQSAIILTFLPFVSLENCIFFIEEPELFLH EEEECCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEC PSMQRKILEFYHSLGRHLFFMTTHSNHLLDITIDIPEISIYSFRKSITSSDDDQTPQFVV CHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHH ENVDNNQSSSLELLGVRNSSVLLVNATIWVEGITDRWYLREMLQMYMKTLPNPKPKLEED CCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHC IHYAFVEYGGGNITNFSFFEEQDNEKLINIKNLCAKAILVIDHDGESKKNRKQQLKDKLG CEEEEEEECCCCCCCCEECCCCCCCCEECHHHHHCEEEEEEECCCCCHHHHHHHHHHHHC TDLIILPCREIENSLPPEVIRSVVIEYETSTQKPNPEINSFAYTDYQNESLGDFIENYVI CCEEEEECHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHC KGEKHRRGSYKADSGTITDKLGFCKRALKYINPLTDAELAKLDTEERQLRHLELFKALPE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCH STQQIIIKIYDFIAKLNPS HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQQIETLYLPDSVKSSYQNVENQPLTQLDSLSRVNILVGANNSGKSRFMCLLTETANFSI CCCCCEEECCHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCCCCCCEEEEEEEECCCEEE RIRDVDFINRTIENAIDKIINIYTFIGHPQISRYDTSFLTQLKSKLITKNNTNTNNNYQN EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH IFDVFNHLSEYKSIYEQLKEIKNISKEIVEILKSTQLNLTKNIYIPTLRGLRPLNNAYND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHH FYKQQTLESYFKDAEHKPEVFTGLGLYTELRSYLLGDNAKRKKIKEYQEFISRSLFEGQE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCE VTLIPSEEQKIVVVKIGNELERPIHELGDGIQSAIILTFLPFVSLENCIFFIEEPELFLH EEEECCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEC PSMQRKILEFYHSLGRHLFFMTTHSNHLLDITIDIPEISIYSFRKSITSSDDDQTPQFVV CHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHH ENVDNNQSSSLELLGVRNSSVLLVNATIWVEGITDRWYLREMLQMYMKTLPNPKPKLEED CCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHC IHYAFVEYGGGNITNFSFFEEQDNEKLINIKNLCAKAILVIDHDGESKKNRKQQLKDKLG CEEEEEEECCCCCCCCEECCCCCCCCEECHHHHHCEEEEEEECCCCCHHHHHHHHHHHHC TDLIILPCREIENSLPPEVIRSVVIEYETSTQKPNPEINSFAYTDYQNESLGDFIENYVI CCEEEEECHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHC KGEKHRRGSYKADSGTITDKLGFCKRALKYINPLTDAELAKLDTEERQLRHLELFKALPE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCH STQQIIIKIYDFIAKLNPS HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA