Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897071

Identifier: 159897071

GI number: 159897071

Start: 626851

End: 628089

Strand: Direct

Name: 159897071

Synonym: Haur_0542

Alternate gene names: NA

Gene position: 626851-628089 (Clockwise)

Preceding gene: 159897070

Following gene: 159897072

Centisome position: 9.88

GC content: 24.37

Gene sequence:

>1239_bases
TTGACATTTGTGCTAGGATTTAAAAGATTTACATATTTGGGTATTTCTATGATGCAACCACTTACAAATATCAGTAAAGC
TGTAGATAGGATTATTGAATCACTTCCACAATTACAGCCTGTTTTGGAATCAACGACTTATAGACTTGGTGATGACTCTA
TTATCATTCGAAATAAGTATCCAGAATATCGAAACCAATTAAAATTACATAAAGATTTACTATCTAATATAATATTGGAA
GAGTTAGATAATAAGGAATTTAATTTTATTATAGATGAATCTGATATTAATTTTATTGAATTCGATAGAATTTCTTCAAA
AAGATCAGTATCTAAAAATATAAATCATAATTTTAATATAGAAAATAATATAAATTTAAATTTCTATACTTCTCAATCAA
TAGATGTAATAGATTCTGGTATATCACAATATTTAGATGATTTTAAAAAAAGAATGGTGTGGCCTCACTACAAAATAATA
AGAAAAAAAGAAAATTCATCAAAAATAGTTTACGAAATATCATTCATTTCGATTGGTGAATTGGGGTTTATCACAGATAT
GACGGGAAAGATCTATTTAAGGAAAATAGGCGGAGGTGGATTTAACATCAAATATATAAATCCATTCCATATAAAAGATA
ATATAGATAAGTTAGTTGAATTTCACCTCGAGGAATTTGATAAAATAAAGAAATGGCATAACTTTGAAATAGATATTCTT
GAATCATCTATAGATTCTTCAAGAAATATTATAGTTATTTCTAGAGAGATATTTGAATATATTGAATATAGCTTAAAAGA
AGATGAAATAATTGAAGATAATGATTTATATAGAATTAATAGAAATAATGAATATTACGTAAACCTTGATAGAATAAAAG
AACTATCAAAAATTCAATCAAAAGATTTTGATATTACTAAACTAGTGAAATTATGTTTAGAATTAAATATATCATTTTCA
AATGAGTGTTATTTTGCAGCTATATTTATTCTTAGGGCTATTATAGATCATATACCACCAATATTTGGACATATTAATTT
TGATAATGTAGTAAGTAACTATAAAGGTAATTCTGGCAAAAAAATATTAAATCATCTTTTGGTTACGTTAAAAAATACTG
CTCATATAAATATCCATAAACCTATTTCTAGGAAAGAAATTATTCCAAATCGACAACAAGTTGATTTTAAAAGTGAGATA
GACTTTCTATTATCAGAGATAATACAAGAACTGTCATAG

Upstream 100 bases:

>100_bases
CTGCATTCAAGTCACAAGCTGGCTTGTTGGCCTTTGGGGTGAAGGTTAACCTTCGGGATTTCTAAACAAGCCTGCCTGCT
GTCTGAAACAGCAGGCAGGC

Downstream 100 bases:

>100_bases
TGAGAAGGCAGTCATACATCAAGTATGACCGCCTTCTCATATTTAAACCGCTAGTTGAGCCGGCAATACATCCAACTAGG
GCAAGGGCAATTCCACCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTFVLGFKRFTYLGISMMQPLTNISKAVDRIIESLPQLQPVLESTTYRLGDDSIIIRNKYPEYRNQLKLHKDLLSNIILE
ELDNKEFNFIIDESDINFIEFDRISSKRSVSKNINHNFNIENNINLNFYTSQSIDVIDSGISQYLDDFKKRMVWPHYKII
RKKENSSKIVYEISFISIGELGFITDMTGKIYLRKIGGGGFNIKYINPFHIKDNIDKLVEFHLEEFDKIKKWHNFEIDIL
ESSIDSSRNIIVISREIFEYIEYSLKEDEIIEDNDLYRINRNNEYYVNLDRIKELSKIQSKDFDITKLVKLCLELNISFS
NECYFAAIFILRAIIDHIPPIFGHINFDNVVSNYKGNSGKKILNHLLVTLKNTAHINIHKPISRKEIIPNRQQVDFKSEI
DFLLSEIIQELS

Sequences:

>Translated_412_residues
MTFVLGFKRFTYLGISMMQPLTNISKAVDRIIESLPQLQPVLESTTYRLGDDSIIIRNKYPEYRNQLKLHKDLLSNIILE
ELDNKEFNFIIDESDINFIEFDRISSKRSVSKNINHNFNIENNINLNFYTSQSIDVIDSGISQYLDDFKKRMVWPHYKII
RKKENSSKIVYEISFISIGELGFITDMTGKIYLRKIGGGGFNIKYINPFHIKDNIDKLVEFHLEEFDKIKKWHNFEIDIL
ESSIDSSRNIIVISREIFEYIEYSLKEDEIIEDNDLYRINRNNEYYVNLDRIKELSKIQSKDFDITKLVKLCLELNISFS
NECYFAAIFILRAIIDHIPPIFGHINFDNVVSNYKGNSGKKILNHLLVTLKNTAHINIHKPISRKEIIPNRQQVDFKSEI
DFLLSEIIQELS
>Mature_411_residues
TFVLGFKRFTYLGISMMQPLTNISKAVDRIIESLPQLQPVLESTTYRLGDDSIIIRNKYPEYRNQLKLHKDLLSNIILEE
LDNKEFNFIIDESDINFIEFDRISSKRSVSKNINHNFNIENNINLNFYTSQSIDVIDSGISQYLDDFKKRMVWPHYKIIR
KKENSSKIVYEISFISIGELGFITDMTGKIYLRKIGGGGFNIKYINPFHIKDNIDKLVEFHLEEFDKIKKWHNFEIDILE
SSIDSSRNIIVISREIFEYIEYSLKEDEIIEDNDLYRINRNNEYYVNLDRIKELSKIQSKDFDITKLVKLCLELNISFSN
ECYFAAIFILRAIIDHIPPIFGHINFDNVVSNYKGNSGKKILNHLLVTLKNTAHINIHKPISRKEIIPNRQQVDFKSEID
FLLSEIIQELS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48475; Mature: 48344

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFVLGFKRFTYLGISMMQPLTNISKAVDRIIESLPQLQPVLESTTYRLGDDSIIIRNKY
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCC
PEYRNQLKLHKDLLSNIILEELDNKEFNFIIDESDINFIEFDRISSKRSVSKNINHNFNI
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCHHHHHHCCCCCCCC
ENNINLNFYTSQSIDVIDSGISQYLDDFKKRMVWPHYKIIRKKENSSKIVYEISFISIGE
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCEEEEEEEEEEECC
LGFITDMTGKIYLRKIGGGGFNIKYINPFHIKDNIDKLVEFHLEEFDKIKKWHNFEIDIL
CCEEECCCCEEEEEEECCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
ESSIDSSRNIIVISREIFEYIEYSLKEDEIIEDNDLYRINRNNEYYVNLDRIKELSKIQS
HHCCCCCCCEEEEEHHHHHHHHHCCCCCCEECCCCEEEEECCCEEEEEHHHHHHHHHHHC
KDFDITKLVKLCLELNISFSNECYFAAIFILRAIIDHIPPIFGHINFDNVVSNYKGNSGK
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCCHH
KILNHLLVTLKNTAHINIHKPISRKEIIPNRQQVDFKSEIDFLLSEIIQELS
HHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFVLGFKRFTYLGISMMQPLTNISKAVDRIIESLPQLQPVLESTTYRLGDDSIIIRNKY
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCC
PEYRNQLKLHKDLLSNIILEELDNKEFNFIIDESDINFIEFDRISSKRSVSKNINHNFNI
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCHHHHHHCCCCCCCC
ENNINLNFYTSQSIDVIDSGISQYLDDFKKRMVWPHYKIIRKKENSSKIVYEISFISIGE
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEECCCCCEEEEEEEEEEECC
LGFITDMTGKIYLRKIGGGGFNIKYINPFHIKDNIDKLVEFHLEEFDKIKKWHNFEIDIL
CCEEECCCCEEEEEEECCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
ESSIDSSRNIIVISREIFEYIEYSLKEDEIIEDNDLYRINRNNEYYVNLDRIKELSKIQS
HHCCCCCCCEEEEEHHHHHHHHHCCCCCCEECCCCEEEEECCCEEEEEHHHHHHHHHHHC
KDFDITKLVKLCLELNISFSNECYFAAIFILRAIIDHIPPIFGHINFDNVVSNYKGNSGK
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCCHH
KILNHLLVTLKNTAHINIHKPISRKEIIPNRQQVDFKSEIDFLLSEIIQELS
HHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA