Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897072
Identifier: 159897072
GI number: 159897072
Start: 628574
End: 629512
Strand: Direct
Name: 159897072
Synonym: Haur_0543
Alternate gene names: NA
Gene position: 628574-629512 (Clockwise)
Preceding gene: 159897071
Following gene: 159897073
Centisome position: 9.9
GC content: 55.8
Gene sequence:
>939_bases ATGGCTTCATCACTCGCGATTGGCCTCAATCCCATCGAGTTACACATCCTGTTGCTCGTCGCTCGGTTGGGCCGCTTGCT TTCACGTCACCTTCGCACAGCGTGGGGCCATCCGTTTACGGTGACGATTCAAACGGTTAATCGCACCTTGGCCAAGCTCG TCGATGCCAAACTGCTCACCTATTGCGAACACTTTCAATCGCATGGCTATGACCCACGTGGTGCGCTGGGCTGGACACGC CATGGCCGCTTATATAGCCTCACGCCCCTCGGCTGGGAGATCGTCAAACAGGCTTTTCCGATGCTTGAAGAAGGCAGTGA GCGGCTGGCTCCCACGATGTTCAATCCCCAACATCAAGCGGAACACCAGATTGAATATGCCGAGGTCATCACCAGTTTGA TTCAGTCATTACCCTACGTGCCTGGCATTGTCGGGATGAGCAGTTATATCGAAATGGACTTAGGGCCAACCGCACGGCCA CGCGCCGACGGCATTGTCGTGGTGCGCCGCTGGGCCGATGCAACGCAGACCGATCGTGAGCGCTCGTCGCTCTATCCATG GCTGGGGGTTAGCCAACAAGCAGGCCAGATCGATCAACTGTATGCCATTGAGATTGATCGGGGAACCGAGGAACTGAGCA TTATTACGGGTAAGGCCCACTCCTATGGGGAGTTATATCGCTCGAAGTATTGGGAAGGGCGCTATCAATGGCCGCTGATT GCCTTTACCGTGCCGAGCGAACGCCGCAAACGGGCTGTGCTCGATGCGTGGGAAATCGGCTGGCCCGGCAGTCAGCTGCT GATTGCCACTATCGACGAGGTGCGTGAGTCAGGTATTCTCACGCCGATCTGGACAACCCAGTACACCAAGGATGGGCAAC GTATCCAGCAGCCACATCGGTTTTTGAAGGTAAAGTGGTTTGAGAAGATTGTGGCGTAG
Upstream 100 bases:
>100_bases AAAGAATAGCCCATCAGAAAGGCCTAAACTGGCCGTTTGGTCGTGCCGACATTCTTTAACAGGCTGCATCGCCACCGTTT TCATCCTGAGGAGGTTGTTC
Downstream 100 bases:
>100_bases GTACAATATTATAATGCGTATAACCTACATACTTATAATACTGTTAAACCCTCATCCTCCTCTCTTCCATAAGCGACCCC TAGTGGGTCGTTTGTGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLAKLVDAKLLTYCEHFQSHGYDPRGALGWTR HGRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMFNPQHQAEHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARP RADGIVVVRRWADATQTDRERSSLYPWLGVSQQAGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYQWPLI AFTVPSERRKRAVLDAWEIGWPGSQLLIATIDEVRESGILTPIWTTQYTKDGQRIQQPHRFLKVKWFEKIVA
Sequences:
>Translated_312_residues MASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLAKLVDAKLLTYCEHFQSHGYDPRGALGWTR HGRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMFNPQHQAEHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARP RADGIVVVRRWADATQTDRERSSLYPWLGVSQQAGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYQWPLI AFTVPSERRKRAVLDAWEIGWPGSQLLIATIDEVRESGILTPIWTTQYTKDGQRIQQPHRFLKVKWFEKIVA >Mature_311_residues ASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLAKLVDAKLLTYCEHFQSHGYDPRGALGWTRH GRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMFNPQHQAEHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARPR ADGIVVVRRWADATQTDRERSSLYPWLGVSQQAGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYQWPLIA FTVPSERRKRAVLDAWEIGWPGSQLLIATIDEVRESGILTPIWTTQYTKDGQRIQQPHRFLKVKWFEKIVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35629; Mature: 35498
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLAKLVDAKLLT CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH YCEHFQSHGYDPRGALGWTRHGRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMFNPQHQA HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHCCCCCCCCCHHH EHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARPRADGIVVVRRWADATQTDRE HHHHHHHHHHHHHHHHCCCCCCHHCHHHHEEECCCCCCCCCCCCEEEEEECCCCCCCHHH RSSLYPWLGVSQQAGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYQWPLI HHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEE AFTVPSERRKRAVLDAWEIGWPGSQLLIATIDEVRESGILTPIWTTQYTKDGQRIQQPHR EEECCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEEECCCCCCCCHHHHHHHH FLKVKWFEKIVA HHHHHHHHHHCC >Mature Secondary Structure ASSLAIGLNPIELHILLLVARLGRLLSRHLRTAWGHPFTVTIQTVNRTLAKLVDAKLLT CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH YCEHFQSHGYDPRGALGWTRHGRLYSLTPLGWEIVKQAFPMLEEGSERLAPTMFNPQHQA HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHCCCCCCCCCHHH EHQIEYAEVITSLIQSLPYVPGIVGMSSYIEMDLGPTARPRADGIVVVRRWADATQTDRE HHHHHHHHHHHHHHHHCCCCCCHHCHHHHEEECCCCCCCCCCCCEEEEEECCCCCCCHHH RSSLYPWLGVSQQAGQIDQLYAIEIDRGTEELSIITGKAHSYGELYRSKYWEGRYQWPLI HHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEE AFTVPSERRKRAVLDAWEIGWPGSQLLIATIDEVRESGILTPIWTTQYTKDGQRIQQPHR EEECCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEEECCCCCCCCHHHHHHHH FLKVKWFEKIVA HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA