Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159897070
Identifier: 159897070
GI number: 159897070
Start: 625895
End: 626815
Strand: Direct
Name: 159897070
Synonym: Haur_0541
Alternate gene names: NA
Gene position: 625895-626815 (Clockwise)
Preceding gene: 159897069
Following gene: 159897071
Centisome position: 9.86
GC content: 49.84
Gene sequence:
>921_bases ATGACCACACAACTAACCTTATTCGATTACAACGCGCTGGATACTGAAACCCGCGTTATCGTTCAGCAAAAAGCGGTCGA AATTCGGGATCGAATGCGCAGCGCTGCGCAGGCCGTCATCGAGATTGGTGAGCGGCTGATCGATGTGAAAGAACGCTTGG GCCATGGCAAGTTTGGGCAATGGCTTGATGCAGAATTCCAATGGTCAGCTGATACCGCCCGTAACTATATGAATGTTGCT GAGCGGTTTGGTCAAAATCCGAAAATTTCGGAATTTGCACCATCGGCCTTATATTTGTTGGCAGCCCCATCAACACCAGA GGATGCCAGAACTGAAGCGATCAATCTAGCCGAGCAGGGCCAAAAGATTACCCATGCAGTAGCAAAGCAAATTGTAACCA CCCACAAAGAGCAAGCAGCGCCAAAGCCCAAGCCAGCAGCTGCACCAGCAGTGCCAAAACCTGAACCTAAGCTTGAGATC CCCCCAATGCTCATCATTGGCGATAAGACGGTTCCTAGTGCTGAATTCACAGGCACGCCAACACCAAACACAATTGATGA TAGTGAGAGCGAAGAGCTAGCCAGCCAGCCACTGGTTGAAACGCCATCTGAACAACCAGACTTACCACCAATGCTTACCA TTGGCCAACCAAGCCCAGCGGCTGCCGTTGAAATCGATACGAAGCCCTTGGCTTATGCAATCGTGGTGCAGGAGTTGGCG CGGCAAATGGTTACACTTGCCAACCAGCGCGTGAAGTTATTAGAAGATCAAATTGAGGCCCAAGGGAAAGAGGTTATTCA ACCATTCATTGATACAGAGCAGATGGCTGAAGCAGCTGCATCATTTATTGGAACGCCTGCATTCAAGTCACAAGCTGGCT TGTTGGCCTTTGGGGTGAAGGTTAACCTTCGGGATTTCTAA
Upstream 100 bases:
>100_bases TCGATATGAGCACACTCACGATGCGAAGCACCCCAATCACGGTTTCTAATGTGGCTCAATGTCTTGGGGTAACGTCTGCA TTTTTAAAAGGAATTAACGC
Downstream 100 bases:
>100_bases ACAAGCCTGCCTGCTGTCTGAAACAGCAGGCAGGCTTGACATTTGTGCTAGGATTTAAAAGATTTACATATTTGGGTATT TCTATGATGCAACCACTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTTQLTLFDYNALDTETRVIVQQKAVEIRDRMRSAAQAVIEIGERLIDVKERLGHGKFGQWLDAEFQWSADTARNYMNVA ERFGQNPKISEFAPSALYLLAAPSTPEDARTEAINLAEQGQKITHAVAKQIVTTHKEQAAPKPKPAAAPAVPKPEPKLEI PPMLIIGDKTVPSAEFTGTPTPNTIDDSESEELASQPLVETPSEQPDLPPMLTIGQPSPAAAVEIDTKPLAYAIVVQELA RQMVTLANQRVKLLEDQIEAQGKEVIQPFIDTEQMAEAAASFIGTPAFKSQAGLLAFGVKVNLRDF
Sequences:
>Translated_306_residues MTTQLTLFDYNALDTETRVIVQQKAVEIRDRMRSAAQAVIEIGERLIDVKERLGHGKFGQWLDAEFQWSADTARNYMNVA ERFGQNPKISEFAPSALYLLAAPSTPEDARTEAINLAEQGQKITHAVAKQIVTTHKEQAAPKPKPAAAPAVPKPEPKLEI PPMLIIGDKTVPSAEFTGTPTPNTIDDSESEELASQPLVETPSEQPDLPPMLTIGQPSPAAAVEIDTKPLAYAIVVQELA RQMVTLANQRVKLLEDQIEAQGKEVIQPFIDTEQMAEAAASFIGTPAFKSQAGLLAFGVKVNLRDF >Mature_305_residues TTQLTLFDYNALDTETRVIVQQKAVEIRDRMRSAAQAVIEIGERLIDVKERLGHGKFGQWLDAEFQWSADTARNYMNVAE RFGQNPKISEFAPSALYLLAAPSTPEDARTEAINLAEQGQKITHAVAKQIVTTHKEQAAPKPKPAAAPAVPKPEPKLEIP PMLIIGDKTVPSAEFTGTPTPNTIDDSESEELASQPLVETPSEQPDLPPMLTIGQPSPAAAVEIDTKPLAYAIVVQELAR QMVTLANQRVKLLEDQIEAQGKEVIQPFIDTEQMAEAAASFIGTPAFKSQAGLLAFGVKVNLRDF
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33389; Mature: 33258
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQLTLFDYNALDTETRVIVQQKAVEIRDRMRSAAQAVIEIGERLIDVKERLGHGKFGQ CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WLDAEFQWSADTARNYMNVAERFGQNPKISEFAPSALYLLAAPSTPEDARTEAINLAEQG CCCCCEEECHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH QKITHAVAKQIVTTHKEQAAPKPKPAAAPAVPKPEPKLEIPPMLIIGDKTVPSAEFTGTP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC TPNTIDDSESEELASQPLVETPSEQPDLPPMLTIGQPSPAAAVEIDTKPLAYAIVVQELA CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHH RQMVTLANQRVKLLEDQIEAQGKEVIQPFIDTEQMAEAAASFIGTPAFKSQAGLLAFGVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCEEEEEEE VNLRDF EECCCC >Mature Secondary Structure TTQLTLFDYNALDTETRVIVQQKAVEIRDRMRSAAQAVIEIGERLIDVKERLGHGKFGQ CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WLDAEFQWSADTARNYMNVAERFGQNPKISEFAPSALYLLAAPSTPEDARTEAINLAEQG CCCCCEEECHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH QKITHAVAKQIVTTHKEQAAPKPKPAAAPAVPKPEPKLEIPPMLIIGDKTVPSAEFTGTP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC TPNTIDDSESEELASQPLVETPSEQPDLPPMLTIGQPSPAAAVEIDTKPLAYAIVVQELA CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHH RQMVTLANQRVKLLEDQIEAQGKEVIQPFIDTEQMAEAAASFIGTPAFKSQAGLLAFGVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCEEEEEEE VNLRDF EECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA