Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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Identifier: 159897034

GI number:

Start: 583543

End: 584790

Strand: Direct

Name: Not Available

Synonym: Haur_0502

Alternate gene names: NA

Gene position: NA

Preceding gene: 159897024

Following gene: 159897035

Centisome position: NA

GC content: NA

Gene sequence:

>1248_bases
ATGGACGAGCAAACACAACCGGGCATGGATCAATCTGATGTGCTTCCCAGCACAGGATTGAACGCGACCCCACAGGCCGA
TTATTCTGGCGATGATGATCGTGCCCTGCTGGAGGAGTATCTCCGTGATCCAGCCCACGATTATCGCAATCTCAAGTATG
GTGATTCGGTCGATGGCACGATTGTTCGCGTTGATCGCGACGAGGTGTTGGTCGATATTGGCTCCAAGTCGGAAGGCGTG
GTGCCAGGCCGCGAGATGACCAGTCTGTCGTCGGAAGAACGCGCCGAACTCAAGGTTGGCGATGTCTTGCTTGTTACAGT
CGTTCAAACCGAAGACGCTGAAGGGCGTATCGTGTTGTCGATAGATAAAGCACGCCAAGAAAAGAGTTGGCGAGCCTTGC
AAGTCAACCATGAGGCTGGCGATGTGATTCACGCCGCCGTGACCAACTATAACAAGGGTGGTCTGTTGGTTAATTTAAGT
GGGGTGCGTGGCTTTGTGCCATCATCACAGGTCAGCAGCGTCAGCCGTGGCTCCGATGTCCAAAAACAATCGGATATGGC
AAAACTGGTCGGCCAAACCTTGCCACTGAAAATTATCGAAATCAATCGTTCGCGCAATCGGCTGATTCTATCCGAGCGCC
AAGCCGTCCAAGAGGTTCGCGATTCGCGCAAGGATCAACTGCTTGAAAAACTGGAACCAGGCGCAGTTCGCACTGGCCGC
GTAACCAGTTTGTGCGATTTCGGCGCGTTTGTCGATATTGGCGGAGCAGACGGTTTGGTTCACCTTTCCGAGCTTTCTTG
GAGCCGCGTCAAACATCCCGAGGAAGTGCTGAAAGTTGGCGATGCAGTCAGCGTCTATATTTTAAGCGTCGATGAAGATA
AAAAACGCATCGCGCTGAGTATCAAGCGCACCCAAGCTGAGCCTTGGACAACCGTTACCGACCGCTACCAAATTGGCCAA
AGCGTTTCAGGGGTTGTTACTCAATTGACCGCCTTTGGCGCGTTTGTCCGGCTTGAAGATGGCATCGAAGGTCTGATCCA
CATCTCAGAAATGAGTGATGAACGGATTCAGCACCCACGCGATGTGATTAATGAAGGCGATAGCGTTTCAGCCCGCATTA
TTCGGATCGACCCAACGCGCAAGCGGATTGGCTTGAGTACCCGCAGTGGCAGCGCTGAAGCAACCGCTGAAGCAACTGCT
GAAACAGCAACCGAAGAACCAAGCGCTGCAGCCGAAGACGAAGAATAA

Upstream 100 bases:

>100_bases
AACCTTGCCTTTTGCATGCTGCTTCTGTATAATTTTCATATCGGTTTCACGCTGTCCGCCCTTCCTCGGGAATCCTCTTT
TGGCAAAAGGACGACTCATT

Downstream 100 bases:

>100_bases
CGGAATGGGAGCGGAGAAGGTGCTGGGTCTGTGAAAACCCTGCTGGTTCCCCTGCTGCAACGGTCATGTCCGTTTCAAGC
AAAACGCTAACTCAAACGGG

Product: RNA-binding S1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>415_residues
MDEQTQPGMDQSDVLPSTGLNATPQADYSGDDDRALLEEYLRDPAHDYRNLKYGDSVDGTIVRVDRDEVLVDIGSKSEGV
VPGREMTSLSSEERAELKVGDVLLVTVVQTEDAEGRIVLSIDKARQEKSWRALQVNHEAGDVIHAAVTNYNKGGLLVNLS
GVRGFVPSSQVSSVSRGSDVQKQSDMAKLVGQTLPLKIIEINRSRNRLILSERQAVQEVRDSRKDQLLEKLEPGAVRTGR
VTSLCDFGAFVDIGGADGLVHLSELSWSRVKHPEEVLKVGDAVSVYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQ
SVSGVVTQLTAFGAFVRLEDGIEGLIHISEMSDERIQHPRDVINEGDSVSARIIRIDPTRKRIGLSTRSGSAEATAEATA
ETATEEPSAAAEDEE

Sequences:
NA

Specific function: NA

COG id: COG0539

COG function: function code J; Ribosomal protein S1

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA