Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159896990

Identifier: 159896990

GI number: 159896990

Start: 535233

End: 535799

Strand: Direct

Name: 159896990

Synonym: Haur_0458

Alternate gene names: NA

Gene position: 535233-535799 (Clockwise)

Preceding gene: 159896989

Following gene: 159896994

Centisome position: 8.43

GC content: 43.74

Gene sequence:

>567_bases
ATGCAACGTTTGATCGTAGCTATGCTGCTGTTGGTGATCCTCATCGGTTGTCGCCAACAACAAACAACCCAGCCGCTTAC
TCCTTCGCCAATCAATAGTATTGATTCACGGAAGATTGAGGCAATCATTCTTAAGCCATTTCAGAATGAGCAGATTCAGA
ATCTTCAAATGTATCCAGTGGCAGGGCTTAACGAGGGAATGCTGTTTGTGTATCAGCTCGATTCAGCAAGAGGCAAAGCA
ATTGGTTTGTTGACTGGAGTTGAAACTTTAGGCGAATTCTCAATCCGTAGCCAGTCCCTTGATATTCTTGGGCCTCAGAA
GCCGTATGGTTTTTATCTGAGCAATGATGGTGGACAACCAAATTACATTGGCTATGGCTATATTCAACATCCAGAAACGA
TTAAGCAACTGCGAATTATATTGAGCGATGGTAACAGCTTGGTTGTTACTGGGAATACGATTACTGGCTTGGTCATGCCC
AAACATAATCCGCCAATTCGACTAGAAGTTGTGGGAATAGATGGCACGATCATTGAACAGAATCCAATCACGCTTCCCAC
TCCTTGA

Upstream 100 bases:

>100_bases
TAGATCCAAGAATATAAATTACCACTTGTAAGTAATGTCGATCATCCCTCGTGGTGAACACATCAATCAAAGCCCGAGGG
ATGATCAAAGAAAGTAGGTT

Downstream 100 bases:

>100_bases
AATGTTTAGCCACCCCAAACCTCGTTTTCGTGGCGCACGATCATGCTAATTGGCAAAATGGTATTTTCGCTGCTAGGAGT
TTTGCCTTCGATCAGCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPVAGLNEGMLFVYQLDSARGKA
IGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQPNYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMP
KHNPPIRLEVVGIDGTIIEQNPITLPTP

Sequences:

>Translated_188_residues
MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPVAGLNEGMLFVYQLDSARGKA
IGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQPNYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMP
KHNPPIRLEVVGIDGTIIEQNPITLPTP
>Mature_188_residues
MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPVAGLNEGMLFVYQLDSARGKA
IGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQPNYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMP
KHNPPIRLEVVGIDGTIIEQNPITLPTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20679; Mature: 20679

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPV
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEC
AGLNEGMLFVYQLDSARGKAIGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQP
CCCCCCEEEEEEECCCCCCEEEEEECHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCC
NYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMPKHNPPIRLEVVGIDGTIIEQ
CEEEEEEEECCHHHHHEEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCEEECC
NPITLPTP
CCEECCCC
>Mature Secondary Structure
MQRLIVAMLLLVILIGCRQQQTTQPLTPSPINSIDSRKIEAIILKPFQNEQIQNLQMYPV
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEC
AGLNEGMLFVYQLDSARGKAIGLLTGVETLGEFSIRSQSLDILGPQKPYGFYLSNDGGQP
CCCCCCEEEEEEECCCCCCEEEEEECHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCC
NYIGYGYIQHPETIKQLRIILSDGNSLVVTGNTITGLVMPKHNPPIRLEVVGIDGTIIEQ
CEEEEEEEECCHHHHHEEEEEECCCEEEEECCCEEEEEEECCCCCEEEEEEECCCEEECC
NPITLPTP
CCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA