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The map label for this gene is panD

Identifier: 159896918

GI number: 159896918

Start: 456723

End: 457100

Strand: Direct

Name: panD

Synonym: Haur_0386

Alternate gene names: 159896918

Gene position: 456723-457100 (Clockwise)

Preceding gene: 159896917

Following gene: 159896919

Centisome position: 7.2

GC content: 50.53

Gene sequence:

>378_bases
ATGATTCGTACCCTCGTGCATGCCAAAATTCACCGTGCAACCGTAACTGGTGCAGACCTCAATTATGTTGGTTCGATAAC
CATTGATGAGGATCTGTTGGAAGCAGCTGGAATTTGGCCGTTTGAACGGGTTCAGGTAGTCGATGTCAATAATGGAGCAC
GCCTCGAAACCTATGCAATCGTGGGCGAACGTGGCTCAGGCACGATTCAACTCAACGGTGCGGCGGCGCACTTAGTCAAT
GTTGGCGATTTGGTGATCATCATGGCGTATGCCCAAGTTGATGCCAAACCCGAAGAGTGGGAGCCAACCGTGGTGTTTGT
GAATGAACAAAACGCGATTACCGAGGTTAAGGCTTTGTTGCCTGTTGGTGGTCGCTAG

Upstream 100 bases:

>100_bases
ACTACTTGCGTTCGGCCAATCACAGCCGTATCATGGTTTATGGCGGCGACTGTTGATCGATGGGATGAACAGCGGCGACC
AAACTAAGGAGTAATCAACG

Downstream 100 bases:

>100_bases
TTGTTGTGAGGAGTGTGCCATGGATTGGGTTTTGCGACCCATCCATGGCCTTTTTTTATGACTCTACTTGCTGTTGCTGA
TGCTCAAGCGGCGATTCTTG

Product: aspartate 1-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MIRTLVHAKIHRATVTGADLNYVGSITIDEDLLEAAGIWPFERVQVVDVNNGARLETYAIVGERGSGTIQLNGAAAHLVN
VGDLVIIMAYAQVDAKPEEWEPTVVFVNEQNAITEVKALLPVGGR

Sequences:

>Translated_125_residues
MIRTLVHAKIHRATVTGADLNYVGSITIDEDLLEAAGIWPFERVQVVDVNNGARLETYAIVGERGSGTIQLNGAAAHLVN
VGDLVIIMAYAQVDAKPEEWEPTVVFVNEQNAITEVKALLPVGGR
>Mature_125_residues
MIRTLVHAKIHRATVTGADLNYVGSITIDEDLLEAAGIWPFERVQVVDVNNGARLETYAIVGERGSGTIQLNGAAAHLVN
VGDLVIIMAYAQVDAKPEEWEPTVVFVNEQNAITEVKALLPVGGR

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=123, Percent_Identity=45.5284552845528, Blast_Score=113, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_HERA2 (A9AUB8)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001543165.1
- ProteinModelPortal:   A9AUB8
- SMR:   A9AUB8
- GeneID:   5731954
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_0386
- HOGENOM:   HBG302821
- OMA:   VMNEQEV
- BioCyc:   HAUR316274:HAUR_0386-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 13477; Mature: 13477

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTLVHAKIHRATVTGADLNYVGSITIDEDLLEAAGIWPFERVQVVDVNNGARLETYAI
CCCCCEEEEEEEEEECCCCCCEEEEEEECHHHHHHCCCCCCCEEEEEECCCCCEEEEEEE
VGERGSGTIQLNGAAAHLVNVGDLVIIMAYAQVDAKPEEWEPTVVFVNEQNAITEVKALL
EECCCCCEEEECCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHEEC
PVGGR
CCCCC
>Mature Secondary Structure
MIRTLVHAKIHRATVTGADLNYVGSITIDEDLLEAAGIWPFERVQVVDVNNGARLETYAI
CCCCCEEEEEEEEEECCCCCCEEEEEEECHHHHHHCCCCCCCEEEEEECCCCCEEEEEEE
VGERGSGTIQLNGAAAHLVNVGDLVIIMAYAQVDAKPEEWEPTVVFVNEQNAITEVKALL
EECCCCCEEEECCCEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHEEC
PVGGR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA