Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159896917

Identifier: 159896917

GI number: 159896917

Start: 456125

End: 456346

Strand: Direct

Name: 159896917

Synonym: Haur_0385

Alternate gene names: NA

Gene position: 456125-456346 (Clockwise)

Preceding gene: 159896916

Following gene: 159896918

Centisome position: 7.19

GC content: 49.1

Gene sequence:

>222_bases
ATGCCACAATATAAAAATCGTATGTATCGCAAGGAATGGCTCTCGGAACGCCGTAAATTGGCGCGAGCGTTGGAAGGCCT
CGAACAAAATTGGGATCTTGAGGCCGAAGGCATTGTCTTACCAACTGACGATGATGGTGCTACCTTGACGGTTGAGCAAT
TGCGCGAACGAATTGCCGACCTTGATGGCAAGCTTGAGCGCTATCCCAACCCACAAAAGTAA

Upstream 100 bases:

>100_bases
AGCCACTGGCCATTTTGAATCAGCTCCATGAACTGCCTGCTTGGTTGGCGCAACCAGCCTGAATGGTACAATAACAACAT
CTCAACTTCTGGAGGATTGT

Downstream 100 bases:

>100_bases
TTAAGGTGCCCTCACCCCAATCCCTCTCCCGCACGCGAGGCGAGGGGGGAACCACTAAACCAAACGCCCTCGCCCGCCGC
AGTGGGAGAGGGGTTGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MPQYKNRMYRKEWLSERRKLARALEGLEQNWDLEAEGIVLPTDDDGATLTVEQLRERIADLDGKLERYPNPQK

Sequences:

>Translated_73_residues
MPQYKNRMYRKEWLSERRKLARALEGLEQNWDLEAEGIVLPTDDDGATLTVEQLRERIADLDGKLERYPNPQK
>Mature_72_residues
PQYKNRMYRKEWLSERRKLARALEGLEQNWDLEAEGIVLPTDDDGATLTVEQLRERIADLDGKLERYPNPQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8659; Mature: 8528

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQYKNRMYRKEWLSERRKLARALEGLEQNWDLEAEGIVLPTDDDGATLTVEQLRERIAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHC
LDGKLERYPNPQK
CCCHHHCCCCCCC
>Mature Secondary Structure 
PQYKNRMYRKEWLSERRKLARALEGLEQNWDLEAEGIVLPTDDDGATLTVEQLRERIAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHC
LDGKLERYPNPQK
CCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA