Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896913
Identifier: 159896913
GI number: 159896913
Start: 453125
End: 453670
Strand: Direct
Name: 159896913
Synonym: Haur_0381
Alternate gene names: NA
Gene position: 453125-453670 (Clockwise)
Preceding gene: 159896912
Following gene: 159896916
Centisome position: 7.14
GC content: 48.9
Gene sequence:
>546_bases ATGGCAGATCGTCAAAGTTGGAGCGTGAAGGGAACCGCAATTCTGACCGAGTTGGTAAAAATGATGGATGTTTCGGCTGC TGAATCGCAATTACTCGGCAGTTTGCACGATGGCGCTAAAGCACAAACCACCGCCTTCACCGATGCTTTTTACAAACGTT TGTTGGGCCACGCCGCCACTGCCGAATATCTCGATGGGGTGTCGGTCGAACGCTTAACGGGTATGCTTGGTATGTGGTTT AGTGATCTGTTTCGCGGCAATTATGATGAAGCCTATGCTCAACAACGTTTGAAAATTGGCGAAATTCATGTGCGGATTGG CTTGCCTGTGCGTTATCCTTTGGCTATGCTCGATGTGATTATGCCATTTGGTGAGCAAGTTGCTGCCACCAGTAGCGACC CTGCCAAGGCTATAACGGCATTTCGCAAAGTATTAGCCCTCGATGTTGCCCTCTTTAATCAAGCCTACGAAGATAATCAA TTGTCGCACTTGGCCGATTTAGTCGGTGGTGAGCGCTTAGCCCGTTTGCTACTGGCTGGTCAATAA
Upstream 100 bases:
>100_bases CTGCGCCAACACGCCAATTTGGGCATGATTCGGATTGAAGCTCGTGAAACAGGTCGTGCCATCGCCGAACTGATGACCGC TTAATTCAAGGAGGTAGCTC
Downstream 100 bases:
>100_bases GGTTGGTTGGGCTTTCCTCAATTGCGCTGTTGCAACGCCCGAATATTCGTCAGACAACCTGCAAAATCCCAAATTAAATC GTCGTGATCGAGGCGTAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Kinase
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MADRQSWSVKGTAILTELVKMMDVSAAESQLLGSLHDGAKAQTTAFTDAFYKRLLGHAATAEYLDGVSVERLTGMLGMWF SDLFRGNYDEAYAQQRLKIGEIHVRIGLPVRYPLAMLDVIMPFGEQVAATSSDPAKAITAFRKVLALDVALFNQAYEDNQ LSHLADLVGGERLARLLLAGQ
Sequences:
>Translated_181_residues MADRQSWSVKGTAILTELVKMMDVSAAESQLLGSLHDGAKAQTTAFTDAFYKRLLGHAATAEYLDGVSVERLTGMLGMWF SDLFRGNYDEAYAQQRLKIGEIHVRIGLPVRYPLAMLDVIMPFGEQVAATSSDPAKAITAFRKVLALDVALFNQAYEDNQ LSHLADLVGGERLARLLLAGQ >Mature_180_residues ADRQSWSVKGTAILTELVKMMDVSAAESQLLGSLHDGAKAQTTAFTDAFYKRLLGHAATAEYLDGVSVERLTGMLGMWFS DLFRGNYDEAYAQQRLKIGEIHVRIGLPVRYPLAMLDVIMPFGEQVAATSSDPAKAITAFRKVLALDVALFNQAYEDNQL SHLADLVGGERLARLLLAGQ
Specific function: Unknown
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19807; Mature: 19676
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRQSWSVKGTAILTELVKMMDVSAAESQLLGSLHDGAKAQTTAFTDAFYKRLLGHAAT CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AEYLDGVSVERLTGMLGMWFSDLFRGNYDEAYAQQRLKIGEIHVRIGLPVRYPLAMLDVI HHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHH MPFGEQVAATSSDPAKAITAFRKVLALDVALFNQAYEDNQLSHLADLVGGERLARLLLAG HHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC Q C >Mature Secondary Structure ADRQSWSVKGTAILTELVKMMDVSAAESQLLGSLHDGAKAQTTAFTDAFYKRLLGHAAT CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AEYLDGVSVERLTGMLGMWFSDLFRGNYDEAYAQQRLKIGEIHVRIGLPVRYPLAMLDVI HHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHH MPFGEQVAATSSDPAKAITAFRKVLALDVALFNQAYEDNQLSHLADLVGGERLARLLLAG HHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA