Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159896912
Identifier: 159896912
GI number: 159896912
Start: 452731
End: 453108
Strand: Direct
Name: 159896912
Synonym: Haur_0380
Alternate gene names: NA
Gene position: 452731-453108 (Clockwise)
Preceding gene: 159896911
Following gene: 159896913
Centisome position: 7.13
GC content: 48.41
Gene sequence:
>378_bases ATGGCTAGTCGTTCGGAACAAATTAATACTATTTTAGGCCAACTTGTCACAAATAACGGTAATGATATTAACGGGGCTGC ATTGATTAGCTCCGATGGGATTTTAATTGGCTCACGGATGTCGGCGGATGTGAATGCCGACCGCATGGGCGCAATTGCCG CAACCATGATGGGGGTTACCACCCGCGTGGTCAACGATTTGAAAATTGGTAAAGCCAATGAGGCAATTGTGAATGCCGAA AGTGGCTATCTCTTGGTTATGCCGGTGGCCGCTCAGATGATTCTAGCAATCATTCTGCGCCAACACGCCAATTTGGGCAT GATTCGGATTGAAGCTCGTGAAACAGGTCGTGCCATCGCCGAACTGATGACCGCTTAA
Upstream 100 bases:
>100_bases TACCCCTCAGTGAGCGATGTGATCAGTACCTTGCTTGATCGAATCGACGTTTTAGCCCAAGATTCATCCTCCTCCTCTGA AAATAACAAGGAGCATTCTC
Downstream 100 bases:
>100_bases TTCAAGGAGGTAGCTCATGGCAGATCGTCAAAGTTGGAGCGTGAAGGGAACCGCAATTCTGACCGAGTTGGTAAAAATGA TGGATGTTTCGGCTGCTGAA
Product: roadblock/LC7 family protein
Products: NA
Alternate protein names: Ras-Like GTPase Activity Regulator; Carboxy- Peptidase
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MASRSEQINTILGQLVTNNGNDINGAALISSDGILIGSRMSADVNADRMGAIAATMMGVTTRVVNDLKIGKANEAIVNAE SGYLLVMPVAAQMILAIILRQHANLGMIRIEARETGRAIAELMTA
Sequences:
>Translated_125_residues MASRSEQINTILGQLVTNNGNDINGAALISSDGILIGSRMSADVNADRMGAIAATMMGVTTRVVNDLKIGKANEAIVNAE SGYLLVMPVAAQMILAIILRQHANLGMIRIEARETGRAIAELMTA >Mature_124_residues ASRSEQINTILGQLVTNNGNDINGAALISSDGILIGSRMSADVNADRMGAIAATMMGVTTRVVNDLKIGKANEAIVNAES GYLLVMPVAAQMILAIILRQHANLGMIRIEARETGRAIAELMTA
Specific function: Unknown
COG id: COG2018
COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13137; Mature: 13005
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRSEQINTILGQLVTNNGNDINGAALISSDGILIGSRMSADVNADRMGAIAATMMGVT CCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHH TRVVNDLKIGKANEAIVNAESGYLLVMPVAAQMILAIILRQHANLGMIRIEARETGRAIA HHHHHHHCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH ELMTA HHHCC >Mature Secondary Structure ASRSEQINTILGQLVTNNGNDINGAALISSDGILIGSRMSADVNADRMGAIAATMMGVT CCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHH TRVVNDLKIGKANEAIVNAESGYLLVMPVAAQMILAIILRQHANLGMIRIEARETGRAIA HHHHHHHCCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH ELMTA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA