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The map label for this gene is rutC [H]

Identifier: 159185243

GI number: 159185243

Start: 2467822

End: 2468208

Strand: Reverse

Name: rutC [H]

Synonym: Atu2498

Alternate gene names: 159185243

Gene position: 2468208-2467822 (Counterclockwise)

Preceding gene: 15889765

Following gene: 159185242

Centisome position: 86.86

GC content: 57.36

Gene sequence:

>387_bases
ATGCCGAAGAAGATCATCGTGCCAGTAGGCACCAGCAAACCCATCGCCCCTTTTTCGCCGGGAACCCTTGCCGATGGCGT
GGTTTATGTGTCCGGCACGCTGCCCTTCGACAAGGACAATAACGTCGTGCATGTGGGCGATGCCAGTGCGCAGACACGCC
ATGTTCTCGAAACCATCAAGTCGGTCATCGAAACCGCCGGCGGCACGATGGAAGACGTGACGATGAACCACATCTTCATC
ACCGACTGGGCGAATTATCAGGCCGTCAACACGGTCTATGCCGAATATTTCCCCGGCGACAAGCCGGCGCGGTATTGCAT
CCAGTGCGGCCTGGTAAAGCCTGATGCACTGGTGGAAATCGCCACCGTCGCCCATATCGGCAAATAG

Upstream 100 bases:

>100_bases
AGTTTTTCGGCTGGGTCGCCACCGTCAATGATTTCTGCGGCGTCATTTCGCAGGCCGCGCCCGTTACCGATTGAGCAGGA
ACCACAAAGAGGAGAACGAA

Downstream 100 bases:

>100_bases
GGCGAAGTGGCAGATGATGCATTTCGAGGTTCATGGCCGCACCGATGCCGAGGCGCCCACCATCCTTTTGTCTTCGGGGC
TTGGCGGATCGAGTGCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPKKIIVPVGTSKPIAPFSPGTLADGVVYVSGTLPFDKDNNVVHVGDASAQTRHVLETIKSVIETAGGTMEDVTMNHIFI
TDWANYQAVNTVYAEYFPGDKPARYCIQCGLVKPDALVEIATVAHIGK

Sequences:

>Translated_128_residues
MPKKIIVPVGTSKPIAPFSPGTLADGVVYVSGTLPFDKDNNVVHVGDASAQTRHVLETIKSVIETAGGTMEDVTMNHIFI
TDWANYQAVNTVYAEYFPGDKPARYCIQCGLVKPDALVEIATVAHIGK
>Mature_127_residues
PKKIIVPVGTSKPIAPFSPGTLADGVVYVSGTLPFDKDNNVVHVGDASAQTRHVLETIKSVIETAGGTMEDVTMNHIFIT
DWANYQAVNTVYAEYFPGDKPARYCIQCGLVKPDALVEIATVAHIGK

Specific function: May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1787245, Length=128, Percent_Identity=75.78125, Blast_Score=212, Evalue=6e-57,
Organism=Escherichia coli, GI87082213, Length=125, Percent_Identity=28.8, Blast_Score=60, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71982075, Length=126, Percent_Identity=30.1587301587302, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25148896, Length=126, Percent_Identity=30.1587301587302, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71982068, Length=126, Percent_Identity=30.1587301587302, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322138, Length=109, Percent_Identity=28.4403669724771, Blast_Score=68, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320899, Length=83, Percent_Identity=32.5301204819277, Blast_Score=63, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19921376, Length=125, Percent_Identity=37.6, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019898 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13745; Mature: 13614

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKIIVPVGTSKPIAPFSPGTLADGVVYVSGTLPFDKDNNVVHVGDASAQTRHVLETIK
CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHH
SVIETAGGTMEDVTMNHIFITDWANYQAVNTVYAEYFPGDKPARYCIQCGLVKPDALVEI
HHHHHCCCCCCCEEEEEEEEEECCCCEEHHHEEEECCCCCCCHHHHEECCCCCCHHHHHH
ATVAHIGK
HHHHHCCC
>Mature Secondary Structure 
PKKIIVPVGTSKPIAPFSPGTLADGVVYVSGTLPFDKDNNVVHVGDASAQTRHVLETIK
CCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHH
SVIETAGGTMEDVTMNHIFITDWANYQAVNTVYAEYFPGDKPARYCIQCGLVKPDALVEI
HHHHHCCCCCCCEEEEEEEEEECCCCEEHHHEEEECCCCCCCHHHHEECCCCCCHHHHHH
ATVAHIGK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA