Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is hmuT [H]
Identifier: 159185225
GI number: 159185225
Start: 2430084
End: 2430977
Strand: Reverse
Name: hmuT [H]
Synonym: Atu2460
Alternate gene names: 159185225
Gene position: 2430977-2430084 (Counterclockwise)
Preceding gene: 15889736
Following gene: 15889730
Centisome position: 85.55
GC content: 64.09
Gene sequence:
>894_bases ATGTTCAATTCCCGCCTTCATTCCCTCGTTTTCGCCACCCTCGTGCCCGCCGCGATCGCATTTGCCGCGCCAGCTGCCAT GGCATCGGACAAGGGTAATCCGGAGGCGAAACGCATCGTTGCGGTGGGCGGAACGGTGACGGAAATCCTTTATGCGCTGG GTGCACAGGACCGCATCGTGGCGCGTGACAGCACCAGCAGCTACCCGGCCGACGTTCTTGCCAAGCCTGACATCGGTTAC ATGCGGGCGCTCTCTTCGGAAGGCATCCTGTCGCAGAAGCCCGATCTCATTCTCTCAGAAGACGGCGCCGGCCCGGCGGA TGTCATCTCCATCCTCAAGGCAAGTGCGGTGCCGTTCGTCACCGTCGATACGCCGCCGAGCGGCGATGCCATCCCCAAGA AGATCGAGGATGTCGGCGCGGCCGTCGGTCTTTCCGACAAGGCCAGGGCACTGGCTGCCGAAACCAAAGCCGGGCTCGAT GCTCTCGCGAAGGATGTCGCCGCGGTGCCGGAAAAGGGCAGGAAACGTGTGCTCTTCGTGCTTTCCAGCGCCGGCGGTCG TGTGATGGCGGCGGGCAAGGATACCGAGGCGGCGGCGATCATCGCAATGGCCGGCGGCATCAATGCGGCCGAGGAGATCA ACGGTTACAAGCCGCTGACGGATGAGGCGGTCATCGCCGCAGCACCCGACGTGGTGCTGACCATGGCGCGCGGTGATCAT GCCGGCAAGGCAGATGAGATTTTCGCGCTGCCGGCCTTCCAGTCCACGCCAGCCGCTGCCAGCAAGGCCCTCATCAGCAT GGACGGGCTTTATCTCATTGGTTTCGGCCCGCGCACACCGGCCGCCGGCCGCGAACTGGCGCACAAGCTTTACCCTGACG TGGTGAAGCCGTGA
Upstream 100 bases:
>100_bases ATACTCCACTTATCGATTGCGCGGTGTATAAACATGTGCAAATAACTCAAGATTAATGGCGCGGGTGAACCTGCGCCGGG TCGTGTTTCAGGATAATGTC
Downstream 100 bases:
>100_bases GCCTTGCGGTCTTGAGTTCCACCGGGGGCGGGGTTGCAGGCGACAGGTCCCGTCAGGGGGCCGTCACCCTTGCCGTGCTA GTCGGCATCCTGCTGTTTGC
Product: ABC transporter, substrate binding protein (hemin)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MFNSRLHSLVFATLVPAAIAFAAPAAMASDKGNPEAKRIVAVGGTVTEILYALGAQDRIVARDSTSSYPADVLAKPDIGY MRALSSEGILSQKPDLILSEDGAGPADVISILKASAVPFVTVDTPPSGDAIPKKIEDVGAAVGLSDKARALAAETKAGLD ALAKDVAAVPEKGRKRVLFVLSSAGGRVMAAGKDTEAAAIIAMAGGINAAEEINGYKPLTDEAVIAAAPDVVLTMARGDH AGKADEIFALPAFQSTPAAASKALISMDGLYLIGFGPRTPAAGRELAHKLYPDVVKP
Sequences:
>Translated_297_residues MFNSRLHSLVFATLVPAAIAFAAPAAMASDKGNPEAKRIVAVGGTVTEILYALGAQDRIVARDSTSSYPADVLAKPDIGY MRALSSEGILSQKPDLILSEDGAGPADVISILKASAVPFVTVDTPPSGDAIPKKIEDVGAAVGLSDKARALAAETKAGLD ALAKDVAAVPEKGRKRVLFVLSSAGGRVMAAGKDTEAAAIIAMAGGINAAEEINGYKPLTDEAVIAAAPDVVLTMARGDH AGKADEIFALPAFQSTPAAASKALISMDGLYLIGFGPRTPAAGRELAHKLYPDVVKP >Mature_297_residues MFNSRLHSLVFATLVPAAIAFAAPAAMASDKGNPEAKRIVAVGGTVTEILYALGAQDRIVARDSTSSYPADVLAKPDIGY MRALSSEGILSQKPDLILSEDGAGPADVISILKASAVPFVTVDTPPSGDAIPKKIEDVGAAVGLSDKARALAAETKAGLD ALAKDVAAVPEKGRKRVLFVLSSAGGRVMAAGKDTEAAAIIAMAGGINAAEEINGYKPLTDEAVIAAAPDVVLTMARGDH AGKADEIFALPAFQSTPAAASKALISMDGLYLIGFGPRTPAAGRELAHKLYPDVVKP
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG4558
COG function: function code P; ABC-type hemin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 30311; Mature: 30311
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNSRLHSLVFATLVPAAIAFAAPAAMASDKGNPEAKRIVAVGGTVTEILYALGAQDRIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEE ARDSTSSYPADVLAKPDIGYMRALSSEGILSQKPDLILSEDGAGPADVISILKASAVPFV ECCCCCCCCCHHCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEE TVDTPPSGDAIPKKIEDVGAAVGLSDKARALAAETKAGLDALAKDVAAVPEKGRKRVLFV EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LSSAGGRVMAAGKDTEAAAIIAMAGGINAAEEINGYKPLTDEAVIAAAPDVVLTMARGDH EECCCCEEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCEEEEECCCEEEEEECCCC AGKADEIFALPAFQSTPAAASKALISMDGLYLIGFGPRTPAAGRELAHKLYPDVVKP CCCCCCEEEECCCCCCCHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHCCHHCCC >Mature Secondary Structure MFNSRLHSLVFATLVPAAIAFAAPAAMASDKGNPEAKRIVAVGGTVTEILYALGAQDRIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEE ARDSTSSYPADVLAKPDIGYMRALSSEGILSQKPDLILSEDGAGPADVISILKASAVPFV ECCCCCCCCCHHCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEE TVDTPPSGDAIPKKIEDVGAAVGLSDKARALAAETKAGLDALAKDVAAVPEKGRKRVLFV EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LSSAGGRVMAAGKDTEAAAIIAMAGGINAAEEINGYKPLTDEAVIAAAPDVVLTMARGDH EECCCCEEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCEEEEECCCEEEEEECCCC AGKADEIFALPAFQSTPAAASKALISMDGLYLIGFGPRTPAAGRELAHKLYPDVVKP CCCCCCEEEECCCCCCCHHHHHHHEEECCEEEEEECCCCCHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]