Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is dht [H]
Identifier: 159185188
GI number: 159185188
Start: 2356551
End: 2358008
Strand: Direct
Name: dht [H]
Synonym: Atu2386
Alternate gene names: 159185188
Gene position: 2356551-2358008 (Clockwise)
Preceding gene: 159185187
Following gene: 159185189
Centisome position: 82.93
GC content: 61.18
Gene sequence:
>1458_bases ATGATCGCCACCATCATCAAAAACGGCACCATCGTCACCGCCGACCTCACCTACAAGGCAGACATCAGGATCGAAGGCGG CAGGATCACTGAGATCGGCCCTGATCTGACCGGCGGCACGATCCTCGATGCCACGGAATGTTACATCATGCCGGGCGGCA TCGATCCGCATGTGCATCTGGAAATGCCCTTCATGGGCACCTATTCCGCCGACGATTTCGAGAGCGGCACGCGCGCCGCC CTTGCCGGCGGCACCACCATGGTGGTGGATTTCTGCCTGCCCGATCCCGGCCAGTCGCTTCTCGATGCCCTGCAGAGATG GGACAACAAGGCGACGCGCGCCAATTGCGATTATTCCTTCCACATGGCGGTTACCTGGTGGGGCGAGCGGGTCTTCAACG AGATGAAGACGGTGGTTCAGGAAAAAGGCATCAACTCGTTCAAGCACTTCATGGCCTATAAGGGCGCGCTGATGGTAAAT GACGACGAGATGTTCGCCTCCTTCTCGCGCTGTGCGGAACTCGGCGCCATTCCCTTCGTGCATGCGGAAAACGGCGATAT CGTCGCGCAGATGCAGGAAAAACTGATGGCCGAGGGCAATGTCGGCCCGGAGGCGCATGCCTATTCCCGGCCTCCCTCCG TGGAAGGCGAAGCGACCAACCGCGCCATCATCATTGCCGACATGGCCGGCGCCCCGCTTTATGTCGTCCACACATCCTGC GAGCAGGCGCATGAAGCCATCCGCCGCGCGCGCCAGAATGGCATGCGCGTTTATGGCGAACCGCTGATCCAGCACCTGAT CCTCGATGAAAGTGAATATGCCAATGCCGATTGGGATCATGCCGCCCGGCGGGTCATGTCGCCACCCTTCCGCAACCGGC AACACCAGGACAGCCTCTGGGCGGGTCTTGCCTCCGGCTCGCTGCAATGCGTGGCGACCGACCATTGCGCCTTCACCACC GAGCAGAAACGCTTCGGCCTTGGTGATTTCCGCAAGATACCGAACGGCACCGGCGGGCTGGAAGATCGCATGCCGCTGCT CTGGACCCATGGCGTCGCGACCGGCCGGCTGACGATGAATGAATTTGTCGCCGTCACCTCCACCAATATTGCGAAGATCC TCAACATCTATCCGAGAAAGGGCGCGATCCTCGTCGGCAGCGATGCCGATATCGTCGTCTGGGACCCGGCGCTGGAAAAG ACCATCAGCGCCGCAAGCCAGCAATCGGCCATCGATTACAACGTGTTCGAAGGGCAGAAGGTGAAGGGCCTGCCTCGCTA CACCCTGTCGCGCGGCCTCGTCAGTGTCGAGGAAGGCACCATCGAAACACAGGAAGGCCATGGCCAATTCGTGGCCCGCG ATCCCTATCCCGCCGTCAGCCGGGCGCTTTCCACCTGGAAGGAACTCGTTTCGCCGCGCAAGGTGGAACGCACAGGCATT CCGGCATCGGGCGTGTGA
Upstream 100 bases:
>100_bases GGCTTTCCCATAACGAGGCGGAAGAAATTTCGCCGGAATGGGCCGCCGCCGGCTGCGACGTGCTGCTGCATGCGGTGCTG GAGACTGCGGAGATCGTGCA
Downstream 100 bases:
>100_bases CCATGAGCAGCGAGCCGAAACGCGAAATCCTCATCGCCGCCGCCATTCTCCTCAACGAACGACGGCAGATGCTTGTGGTG CGCAAGCGCGGCACCACGCA
Product: phenylhydantoinase
Products: NA
Alternate protein names: DHPase [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MIATIIKNGTIVTADLTYKADIRIEGGRITEIGPDLTGGTILDATECYIMPGGIDPHVHLEMPFMGTYSADDFESGTRAA LAGGTTMVVDFCLPDPGQSLLDALQRWDNKATRANCDYSFHMAVTWWGERVFNEMKTVVQEKGINSFKHFMAYKGALMVN DDEMFASFSRCAELGAIPFVHAENGDIVAQMQEKLMAEGNVGPEAHAYSRPPSVEGEATNRAIIIADMAGAPLYVVHTSC EQAHEAIRRARQNGMRVYGEPLIQHLILDESEYANADWDHAARRVMSPPFRNRQHQDSLWAGLASGSLQCVATDHCAFTT EQKRFGLGDFRKIPNGTGGLEDRMPLLWTHGVATGRLTMNEFVAVTSTNIAKILNIYPRKGAILVGSDADIVVWDPALEK TISAASQQSAIDYNVFEGQKVKGLPRYTLSRGLVSVEEGTIETQEGHGQFVARDPYPAVSRALSTWKELVSPRKVERTGI PASGV
Sequences:
>Translated_485_residues MIATIIKNGTIVTADLTYKADIRIEGGRITEIGPDLTGGTILDATECYIMPGGIDPHVHLEMPFMGTYSADDFESGTRAA LAGGTTMVVDFCLPDPGQSLLDALQRWDNKATRANCDYSFHMAVTWWGERVFNEMKTVVQEKGINSFKHFMAYKGALMVN DDEMFASFSRCAELGAIPFVHAENGDIVAQMQEKLMAEGNVGPEAHAYSRPPSVEGEATNRAIIIADMAGAPLYVVHTSC EQAHEAIRRARQNGMRVYGEPLIQHLILDESEYANADWDHAARRVMSPPFRNRQHQDSLWAGLASGSLQCVATDHCAFTT EQKRFGLGDFRKIPNGTGGLEDRMPLLWTHGVATGRLTMNEFVAVTSTNIAKILNIYPRKGAILVGSDADIVVWDPALEK TISAASQQSAIDYNVFEGQKVKGLPRYTLSRGLVSVEEGTIETQEGHGQFVARDPYPAVSRALSTWKELVSPRKVERTGI PASGV >Mature_485_residues MIATIIKNGTIVTADLTYKADIRIEGGRITEIGPDLTGGTILDATECYIMPGGIDPHVHLEMPFMGTYSADDFESGTRAA LAGGTTMVVDFCLPDPGQSLLDALQRWDNKATRANCDYSFHMAVTWWGERVFNEMKTVVQEKGINSFKHFMAYKGALMVN DDEMFASFSRCAELGAIPFVHAENGDIVAQMQEKLMAEGNVGPEAHAYSRPPSVEGEATNRAIIIADMAGAPLYVVHTSC EQAHEAIRRARQNGMRVYGEPLIQHLILDESEYANADWDHAARRVMSPPFRNRQHQDSLWAGLASGSLQCVATDHCAFTT EQKRFGLGDFRKIPNGTGGLEDRMPLLWTHGVATGRLTMNEFVAVTSTNIAKILNIYPRKGAILVGSDADIVVWDPALEK TISAASQQSAIDYNVFEGQKVKGLPRYTLSRGLVSVEEGTIETQEGHGQFVARDPYPAVSRALSTWKELVSPRKVERTGI PASGV
Specific function: Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N-carbamoyl-D-amino acids [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=483, Percent_Identity=47.4120082815735, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI4503377, Length=479, Percent_Identity=43.4237995824635, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI190194363, Length=458, Percent_Identity=45.4148471615721, Blast_Score=407, Evalue=1e-114, Organism=Homo sapiens, GI4503379, Length=457, Percent_Identity=43.7636761487965, Blast_Score=406, Evalue=1e-113, Organism=Homo sapiens, GI4503051, Length=458, Percent_Identity=43.6681222707424, Blast_Score=403, Evalue=1e-112, Organism=Homo sapiens, GI62422571, Length=458, Percent_Identity=43.6681222707424, Blast_Score=402, Evalue=1e-112, Organism=Homo sapiens, GI19923821, Length=483, Percent_Identity=42.4430641821946, Blast_Score=395, Evalue=1e-110, Organism=Homo sapiens, GI18105007, Length=442, Percent_Identity=26.6968325791855, Blast_Score=101, Evalue=2e-21, Organism=Escherichia coli, GI87082175, Length=460, Percent_Identity=38.695652173913, Blast_Score=310, Evalue=2e-85, Organism=Escherichia coli, GI1786722, Length=461, Percent_Identity=27.3318872017354, Blast_Score=163, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17539558, Length=483, Percent_Identity=46.9979296066253, Blast_Score=438, Evalue=1e-123, Organism=Caenorhabditis elegans, GI71989490, Length=484, Percent_Identity=43.801652892562, Blast_Score=417, Evalue=1e-117, Organism=Caenorhabditis elegans, GI86575075, Length=460, Percent_Identity=30.2173913043478, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI193204318, Length=429, Percent_Identity=24.7086247086247, Blast_Score=92, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6322218, Length=454, Percent_Identity=26.6519823788546, Blast_Score=127, Evalue=3e-30, Organism=Drosophila melanogaster, GI221377917, Length=463, Percent_Identity=45.3563714902808, Blast_Score=409, Evalue=1e-114, Organism=Drosophila melanogaster, GI17137462, Length=461, Percent_Identity=44.6854663774403, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI24644287, Length=294, Percent_Identity=44.2176870748299, Blast_Score=254, Evalue=6e-68, Organism=Drosophila melanogaster, GI24644289, Length=258, Percent_Identity=44.5736434108527, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24642586, Length=447, Percent_Identity=26.8456375838926, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI18859883, Length=415, Percent_Identity=23.6144578313253, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.2.2 [H]
Molecular weight: Translated: 53127; Mature: 53127
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATIIKNGTIVTADLTYKADIRIEGGRITEIGPDLTGGTILDATECYIMPGGIDPHVHL CEEEEEECCEEEEEEEEEEEEEEECCCEEEECCCCCCCCEEEECCEEEEECCCCCCEEEE EMPFMGTYSADDFESGTRAALAGGTTMVVDFCLPDPGQSLLDALQRWDNKATRANCDYSF EECCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEE HMAVTWWGERVFNEMKTVVQEKGINSFKHFMAYKGALMVNDDEMFASFSRCAELGAIPFV EEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCEE HAENGDIVAQMQEKLMAEGNVGPEAHAYSRPPSVEGEATNRAIIIADMAGAPLYVVHTSC ECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCH EQAHEAIRRARQNGMRVYGEPLIQHLILDESEYANADWDHAARRVMSPPFRNRQHQDSLW HHHHHHHHHHHHCCCEEEHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCCCCCCCCHHHHH AGLASGSLQCVATDHCAFTTEQKRFGLGDFRKIPNGTGGLEDRMPLLWTHGVATGRLTMN HHHCCCCEEEEEECCEEECCCHHHCCCCHHHHCCCCCCCCCCCCCEEEECCCEECEEEHH EFVAVTSTNIAKILNIYPRKGAILVGSDADIVVWDPALEKTISAASQQSAIDYNVFEGQK HEEEEECCCHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHCCCEEEECCCCC VKGLPRYTLSRGLVSVEEGTIETQEGHGQFVARDPYPAVSRALSTWKELVSPRKVERTGI CCCCCHHHHHCCCEEECCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHHCCC PASGV CCCCC >Mature Secondary Structure MIATIIKNGTIVTADLTYKADIRIEGGRITEIGPDLTGGTILDATECYIMPGGIDPHVHL CEEEEEECCEEEEEEEEEEEEEEECCCEEEECCCCCCCCEEEECCEEEEECCCCCCEEEE EMPFMGTYSADDFESGTRAALAGGTTMVVDFCLPDPGQSLLDALQRWDNKATRANCDYSF EECCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEE HMAVTWWGERVFNEMKTVVQEKGINSFKHFMAYKGALMVNDDEMFASFSRCAELGAIPFV EEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCEE HAENGDIVAQMQEKLMAEGNVGPEAHAYSRPPSVEGEATNRAIIIADMAGAPLYVVHTSC ECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCH EQAHEAIRRARQNGMRVYGEPLIQHLILDESEYANADWDHAARRVMSPPFRNRQHQDSLW HHHHHHHHHHHHCCCEEEHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCCCCCCCCHHHHH AGLASGSLQCVATDHCAFTTEQKRFGLGDFRKIPNGTGGLEDRMPLLWTHGVATGRLTMN HHHCCCCEEEEEECCEEECCCHHHCCCCHHHHCCCCCCCCCCCCCEEEECCCEECEEEHH EFVAVTSTNIAKILNIYPRKGAILVGSDADIVVWDPALEKTISAASQQSAIDYNVFEGQK HEEEEECCCHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHCCCEEEECCCCC VKGLPRYTLSRGLVSVEEGTIETQEGHGQFVARDPYPAVSRALSTWKELVSPRKVERTGI CCCCCHHHHHCCCEEECCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCCHHHHCCC PASGV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]