Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185150
Identifier: 159185150
GI number: 159185150
Start: 2276532
End: 2277203
Strand: Reverse
Name: 159185150
Synonym: Atu2301
Alternate gene names: NA
Gene position: 2277203-2276532 (Counterclockwise)
Preceding gene: 15889578
Following gene: 15889576
Centisome position: 80.14
GC content: 62.65
Gene sequence:
>672_bases ATGGCAAACGAAAATGATACCTTTATCCGCGAAGTGAACGAGCAGATCCGCTCCGAGCAGCTGTCGCGCTTCTGGGGCCG GTACGGTATCGTGGTCGTGGGCGCCGCCATTCTCGTGGTTGTCGGTGCTGCAGGCGCGGGCATCTACGAATACTGGAACA CCAGCCGCGCTTCCAACTCCGGCGACCAGTTCCTGGCTGCGCTGAAGCTCGCTTCCGAAAACAAGACCGACGATGCGCTG AAGGCCTTTGCCGATCTCGAAACCACGGGTCATGGCAATTATCCAGTGCTTGCGAAGTTCCGCTCCGCCACGCTGCTGTC GCAGAAGGGCGATGCGGCCGGCGCCATCGCCGCCTTCACCGCCATCGGCAACGATACCTCCGCACCGCAGGTCTTCCGCG ACACCGCCAGGGTGCGCGCCGCCTGGTTGCTCGTCGACAACGGCACCTATGATCAGGTGGTTGCACTTGCCGAGCCGCTC AGCACTGACGGCCAGACCATGCGGGCGTCGGCCCGCGAGGCTCTGGGTCTCGCCGCCTACAAGGCCGGCGATTTCGCCAA GGCCAAACAATGGTTCGAGCAGATCATGAGCGACACGCAGGCCCCGCGCAACGTAACGAACCGCGCGCAGATCATGCTCG ACAACATTACCGCTTCGGGCAAAGCTGCTTAA
Upstream 100 bases:
>100_bases GACCCGGTCGGCCTGACTTTTGCCGACCCGGGTAAGCGGCTTGGTATGTCCGCGGACGGATGGATCGGCAACGATCTCCG CGCGGGTAACGGAGAATTTG
Downstream 100 bases:
>100_bases AGCCGCTTCTCCCATCCAGATCGCCCCGGCATTTCTTTGCATTGCCAAAGCGATCCAACTCATTATTTTACGCATGTCTT TTGCCCAAAACAGGTAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MANENDTFIREVNEQIRSEQLSRFWGRYGIVVVGAAILVVVGAAGAGIYEYWNTSRASNSGDQFLAALKLASENKTDDAL KAFADLETTGHGNYPVLAKFRSATLLSQKGDAAGAIAAFTAIGNDTSAPQVFRDTARVRAAWLLVDNGTYDQVVALAEPL STDGQTMRASAREALGLAAYKAGDFAKAKQWFEQIMSDTQAPRNVTNRAQIMLDNITASGKAA
Sequences:
>Translated_223_residues MANENDTFIREVNEQIRSEQLSRFWGRYGIVVVGAAILVVVGAAGAGIYEYWNTSRASNSGDQFLAALKLASENKTDDAL KAFADLETTGHGNYPVLAKFRSATLLSQKGDAAGAIAAFTAIGNDTSAPQVFRDTARVRAAWLLVDNGTYDQVVALAEPL STDGQTMRASAREALGLAAYKAGDFAKAKQWFEQIMSDTQAPRNVTNRAQIMLDNITASGKAA >Mature_222_residues ANENDTFIREVNEQIRSEQLSRFWGRYGIVVVGAAILVVVGAAGAGIYEYWNTSRASNSGDQFLAALKLASENKTDDALK AFADLETTGHGNYPVLAKFRSATLLSQKGDAAGAIAAFTAIGNDTSAPQVFRDTARVRAAWLLVDNGTYDQVVALAEPLS TDGQTMRASAREALGLAAYKAGDFAKAKQWFEQIMSDTQAPRNVTNRAQIMLDNITASGKAA
Specific function: Unknown
COG id: COG4649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23887; Mature: 23756
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANENDTFIREVNEQIRSEQLSRFWGRYGIVVVGAAILVVVGAAGAGIYEYWNTSRASNS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC GDQFLAALKLASENKTDDALKAFADLETTGHGNYPVLAKFRSATLLSQKGDAAGAIAAFT HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH AIGNDTSAPQVFRDTARVRAAWLLVDNGTYDQVVALAEPLSTDGQTMRASAREALGLAAY HCCCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KAGDFAKAKQWFEQIMSDTQAPRNVTNRAQIMLDNITASGKAA CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCCCCCC >Mature Secondary Structure ANENDTFIREVNEQIRSEQLSRFWGRYGIVVVGAAILVVVGAAGAGIYEYWNTSRASNS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC GDQFLAALKLASENKTDDALKAFADLETTGHGNYPVLAKFRSATLLSQKGDAAGAIAAFT HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH AIGNDTSAPQVFRDTARVRAAWLLVDNGTYDQVVALAEPLSTDGQTMRASAREALGLAAY HCCCCCCCHHHHHHHHHHEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KAGDFAKAKQWFEQIMSDTQAPRNVTNRAQIMLDNITASGKAA CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA