Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15889578

Identifier: 15889578

GI number: 15889578

Start: 2277359

End: 2277943

Strand: Reverse

Name: 15889578

Synonym: Atu2302

Alternate gene names: NA

Gene position: 2277943-2277359 (Counterclockwise)

Preceding gene: 159185151

Following gene: 159185150

Centisome position: 80.16

GC content: 58.63

Gene sequence:

>585_bases
ATGCTTTTTCTCGTACTCTGTCTTGCCTTGTTCCTGCTGACCCACCTTTTGAAGGTGGTCGCACCGCAATTTCGCGCCCG
TATGATCGCGGCGATGGGTGAGGGGCCTTTCAAGGGCGTTTATTCCCTCGTCAGCCTCATCACGCTCGGCCTTGTCATCT
ATGCCTTCGGTGAAGCCCGGCAGGAGACCGGCATGCTCTGGAATCCGCCGGTCTTTATGAGCCATATCGCTGTGACCCTG
ATGCTGCCGGCGATGATCTGTCTCATCGCCAGCCTCATCCCGGCTGGCCACATCGCCACGAAGACGAAACATCCGCTCAT
TCTTTCGGTCAAGATCTGGGCGCTCGCGCATCTTCTCGCCAATGGCGAGACGTCCTCGATCCTGCTCTTTGCATCGTTCC
TCGCCTGGGGCGTGGTGATGCGGATTTCGCTGAAGCGCCGCGAGCGCGCGGGTGAAAAAGTGGTCCGCGACTTCGTTTCA
AGCCGCTATGATCTGGTGGCCATCGTCGGCGGCATCGTTCTGTGGGGCGCTTTCATCCTGAAACTGCACGAATGGTTGAT
CGGCGTTCAGCCCATCGCGATGTAG

Upstream 100 bases:

>100_bases
GAAGCTTTGAAGTGGCTGGCGTTTTCATGGCTTTCAGCCTAATTCCTGTTCTTAACCGCGGTGATCGGGCCGCATTCGTT
CCATCGGGGGACCGTGTTCC

Downstream 100 bases:

>100_bases
GAAATCGACGTTTCCCCCTTACATATCAGGCAAAATAGGCTAGAAGGCCGACCATGACCCGGTCGGCCTGACTTTTGCCG
ACCCGGGTAAGCGGCTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NnrUfamily Protein; NnrU Protein; Transmembrane Protein; NnrU-Like Protein; Nitrate Reductase Protein; NnrU Family Membrane Protein

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEARQETGMLWNPPVFMSHIAVTL
MLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLANGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVS
SRYDLVAIVGGIVLWGAFILKLHEWLIGVQPIAM

Sequences:

>Translated_194_residues
MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEARQETGMLWNPPVFMSHIAVTL
MLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLANGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVS
SRYDLVAIVGGIVLWGAFILKLHEWLIGVQPIAM
>Mature_194_residues
MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEARQETGMLWNPPVFMSHIAVTL
MLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLANGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVS
SRYDLVAIVGGIVLWGAFILKLHEWLIGVQPIAM

Specific function: Unknown

COG id: COG4094

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21361; Mature: 21361

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QETGMLWNPPVFMSHIAVTLMLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEHHHHHHHHHHHH
NGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVSSRYDLVAIVGGIVLWGAFIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KLHEWLIGVQPIAM
HHHHHHHCCCCCCC
>Mature Secondary Structure
MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QETGMLWNPPVFMSHIAVTLMLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEHHHHHHHHHHHH
NGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVSSRYDLVAIVGGIVLWGAFIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KLHEWLIGVQPIAM
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA