Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889578
Identifier: 15889578
GI number: 15889578
Start: 2277359
End: 2277943
Strand: Reverse
Name: 15889578
Synonym: Atu2302
Alternate gene names: NA
Gene position: 2277943-2277359 (Counterclockwise)
Preceding gene: 159185151
Following gene: 159185150
Centisome position: 80.16
GC content: 58.63
Gene sequence:
>585_bases ATGCTTTTTCTCGTACTCTGTCTTGCCTTGTTCCTGCTGACCCACCTTTTGAAGGTGGTCGCACCGCAATTTCGCGCCCG TATGATCGCGGCGATGGGTGAGGGGCCTTTCAAGGGCGTTTATTCCCTCGTCAGCCTCATCACGCTCGGCCTTGTCATCT ATGCCTTCGGTGAAGCCCGGCAGGAGACCGGCATGCTCTGGAATCCGCCGGTCTTTATGAGCCATATCGCTGTGACCCTG ATGCTGCCGGCGATGATCTGTCTCATCGCCAGCCTCATCCCGGCTGGCCACATCGCCACGAAGACGAAACATCCGCTCAT TCTTTCGGTCAAGATCTGGGCGCTCGCGCATCTTCTCGCCAATGGCGAGACGTCCTCGATCCTGCTCTTTGCATCGTTCC TCGCCTGGGGCGTGGTGATGCGGATTTCGCTGAAGCGCCGCGAGCGCGCGGGTGAAAAAGTGGTCCGCGACTTCGTTTCA AGCCGCTATGATCTGGTGGCCATCGTCGGCGGCATCGTTCTGTGGGGCGCTTTCATCCTGAAACTGCACGAATGGTTGAT CGGCGTTCAGCCCATCGCGATGTAG
Upstream 100 bases:
>100_bases GAAGCTTTGAAGTGGCTGGCGTTTTCATGGCTTTCAGCCTAATTCCTGTTCTTAACCGCGGTGATCGGGCCGCATTCGTT CCATCGGGGGACCGTGTTCC
Downstream 100 bases:
>100_bases GAAATCGACGTTTCCCCCTTACATATCAGGCAAAATAGGCTAGAAGGCCGACCATGACCCGGTCGGCCTGACTTTTGCCG ACCCGGGTAAGCGGCTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NnrUfamily Protein; NnrU Protein; Transmembrane Protein; NnrU-Like Protein; Nitrate Reductase Protein; NnrU Family Membrane Protein
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEARQETGMLWNPPVFMSHIAVTL MLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLANGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVS SRYDLVAIVGGIVLWGAFILKLHEWLIGVQPIAM
Sequences:
>Translated_194_residues MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEARQETGMLWNPPVFMSHIAVTL MLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLANGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVS SRYDLVAIVGGIVLWGAFILKLHEWLIGVQPIAM >Mature_194_residues MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEARQETGMLWNPPVFMSHIAVTL MLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLANGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVS SRYDLVAIVGGIVLWGAFILKLHEWLIGVQPIAM
Specific function: Unknown
COG id: COG4094
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21361; Mature: 21361
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QETGMLWNPPVFMSHIAVTLMLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEHHHHHHHHHHHH NGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVSSRYDLVAIVGGIVLWGAFIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KLHEWLIGVQPIAM HHHHHHHCCCCCCC >Mature Secondary Structure MLFLVLCLALFLLTHLLKVVAPQFRARMIAAMGEGPFKGVYSLVSLITLGLVIYAFGEAR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QETGMLWNPPVFMSHIAVTLMLPAMICLIASLIPAGHIATKTKHPLILSVKIWALAHLLA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEHHHHHHHHHHHH NGETSSILLFASFLAWGVVMRISLKRRERAGEKVVRDFVSSRYDLVAIVGGIVLWGAFIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KLHEWLIGVQPIAM HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA