Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is engA
Identifier: 15889576
GI number: 15889576
Start: 2274968
End: 2276398
Strand: Reverse
Name: engA
Synonym: Atu2300
Alternate gene names: 15889576
Gene position: 2276398-2274968 (Counterclockwise)
Preceding gene: 159185150
Following gene: 15889575
Centisome position: 80.11
GC content: 62.4
Gene sequence:
>1431_bases ATGAGCTTCACCGTCGCCATAGTCGGGCGCCCCAATGTCGGCAAGTCCACGCTTTTCAACCGTCTGGTCGGAAAGAAGCT GGCGCTGGTGGACGACACACCGGGCGTGACCCGCGACCGCCGCCCCGGCGATGCCAAGCTCATAGACCTGCGCTTCACCA TCATCGATACCGCCGGTCTGGAGCAATCCGGGCCGGAAACGCTTCAGGGCCGTATGTGGGCGCAGACGGAAGCGGCGATC GATGAAGCCGATGTGACGTTGTTTGTCATCGACGCCAAGGCCGGACTGACGCCCGCCGACGAGACGCTGGGCGAAATGTT GCGCCGTCGCGGCAAGCCGGTGGTGCTGGTGGCCAACAAGTCAGAAGCGCGCGGTTCCGATGCCGGTTTTTATGACGCCT TTACCCTCGGTCTTGGCGAGCCTTGCCCGGTTTCAGCCGAACATGGTCAGGGCATGATCGACCTGCGCGACGCCATTGTC GAGGCGATCGGCGAAGACATGGCGTTCCCGCCTGATGTGGATGAGGCGGAAACGGATATTGTGCTTCCGCGCACTGAGCC CGGCAGCGAGGAAGAAGAAGACGAAGAGCCCGTCTATGACGAGACCAAGCCGCTGCGCGTCGCCATCATCGGCCGGCCGA ATGCGGGCAAGTCGACGCTCATCAACCGTTTCCTCGGCGAAGACCGGCTGCTGACCGGCCCGGAAGCCGGCATTACCCGT GACAGCATTTCGGTCGAATGGGACTGGCGCGGCCGCACCATCAAGATGTTCGATACGGCCGGCATGCGCCGCAAGGCCAA GGTGACGGAAAAGCTGGAAAAGCTCTCGGTCGCGGATTCGCTGCGCTCCATCCGTTTTGCGGAAACCGTCGTCATCGTTT TCGACAGCACCATCCCATTCGAAAAGCAGGATCTGCAGCTGGTCGATCTCGTCATTCGCGAAGGCCGCGCCGCCGTGCTC GCCTTCAACAAGTGGGATCTCGTGGAAGACCCGCAGGCCTATCTGGCCGATCTGCGCGAAAAGACCGAGCGTCTCTTGCC GCAGGCGCGTGGCATCCGTGCCGTGCCAATGTCCGGCCAAACGGGTTATGGCCTCGACCGGCTGATGCAGAGCATCATCG ATACGGACAAGACCTGGAACCGCCGCATCTCGACCGCCAAGCTCAACCGCTGGCTGGATGCGCAGACCACGCAGCATCCG CCGCCAGCCGTTTCCGGCCGACGCCTGAAGCTGAAATACATGACGCAGGTCAAGGCCCGCCCGCCGGCCTTCATGATTTC CTGCACCCGTCCGGAAGCCATTCCGGAGAGCTATACGCGTTATCTCGTCAACGGCCTGCGCAAGGATTTCGACATGCCAG GCGTACCGATCCGCGTGCATTATCGTGGCTCGGACAATCCGTTCGAGAGCAAGGCGAAGAAGCGGCGGTGA
Upstream 100 bases:
>100_bases TCTTTGCATTGCCAAAGCGATCCAACTCATTATTTTACGCATGTCTTTTGCCCAAAACAGGTAACGTTTTGGGCAGACTT GCTCTAAGGAACACACAACA
Downstream 100 bases:
>100_bases TCGGCCTGCGGTTTTGAGGCACGACGATGTGGCATTTTCTTCTCCCCGGCGGGGAGAAGATGGCCCGAAGGGTCAGATGA GAGGGCAACCTCTCCTTATA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSFTVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRRPGDAKLIDLRFTIIDTAGLEQSGPETLQGRMWAQTEAAI DEADVTLFVIDAKAGLTPADETLGEMLRRRGKPVVLVANKSEARGSDAGFYDAFTLGLGEPCPVSAEHGQGMIDLRDAIV EAIGEDMAFPPDVDEAETDIVLPRTEPGSEEEEDEEPVYDETKPLRVAIIGRPNAGKSTLINRFLGEDRLLTGPEAGITR DSISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFAETVVIVFDSTIPFEKQDLQLVDLVIREGRAAVL AFNKWDLVEDPQAYLADLREKTERLLPQARGIRAVPMSGQTGYGLDRLMQSIIDTDKTWNRRISTAKLNRWLDAQTTQHP PPAVSGRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHYRGSDNPFESKAKKRR
Sequences:
>Translated_476_residues MSFTVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRRPGDAKLIDLRFTIIDTAGLEQSGPETLQGRMWAQTEAAI DEADVTLFVIDAKAGLTPADETLGEMLRRRGKPVVLVANKSEARGSDAGFYDAFTLGLGEPCPVSAEHGQGMIDLRDAIV EAIGEDMAFPPDVDEAETDIVLPRTEPGSEEEEDEEPVYDETKPLRVAIIGRPNAGKSTLINRFLGEDRLLTGPEAGITR DSISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFAETVVIVFDSTIPFEKQDLQLVDLVIREGRAAVL AFNKWDLVEDPQAYLADLREKTERLLPQARGIRAVPMSGQTGYGLDRLMQSIIDTDKTWNRRISTAKLNRWLDAQTTQHP PPAVSGRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHYRGSDNPFESKAKKRR >Mature_475_residues SFTVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRRPGDAKLIDLRFTIIDTAGLEQSGPETLQGRMWAQTEAAID EADVTLFVIDAKAGLTPADETLGEMLRRRGKPVVLVANKSEARGSDAGFYDAFTLGLGEPCPVSAEHGQGMIDLRDAIVE AIGEDMAFPPDVDEAETDIVLPRTEPGSEEEEDEEPVYDETKPLRVAIIGRPNAGKSTLINRFLGEDRLLTGPEAGITRD SISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFAETVVIVFDSTIPFEKQDLQLVDLVIREGRAAVLA FNKWDLVEDPQAYLADLREKTERLLPQARGIRAVPMSGQTGYGLDRLMQSIIDTDKTWNRRISTAKLNRWLDAQTTQHPP PAVSGRRLKLKYMTQVKARPPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHYRGSDNPFESKAKKRR
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=472, Percent_Identity=41.3135593220339, Blast_Score=327, Evalue=1e-90, Organism=Escherichia coli, GI1788919, Length=161, Percent_Identity=31.6770186335404, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI2367268, Length=169, Percent_Identity=33.1360946745562, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_AGRT5 (Q8UD28)
Other databases:
- EMBL: AE007869 - PIR: A97636 - PIR: AC2859 - RefSeq: NP_355257.1 - ProteinModelPortal: Q8UD28 - SMR: Q8UD28 - STRING: Q8UD28 - GeneID: 1134338 - GenomeReviews: AE007869_GR - KEGG: atu:Atu2300 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: Q8UD28 - ProtClustDB: PRK00093 - BioCyc: ATUM176299-1:ATU2300-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 53048; Mature: 52917
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRRPGDAKLIDLRFTIIDTAGL CCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCC EQSGPETLQGRMWAQTEAAIDEADVTLFVIDAKAGLTPADETLGEMLRRRGKPVVLVANK CCCCCHHHCCCCEEHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECC SEARGSDAGFYDAFTLGLGEPCPVSAEHGQGMIDLRDAIVEAIGEDMAFPPDVDEAETDI CCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCE VLPRTEPGSEEEEDEEPVYDETKPLRVAIIGRPNAGKSTLINRFLGEDRLLTGPEAGITR EEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCCC DSISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFAETVVIVFDSTIPF CCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCC EKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQAYLADLREKTERLLPQARGIRAVPMSGQ CCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCC TGYGLDRLMQSIIDTDKTWNRRISTAKLNRWLDAQTTQHPPPAVSGRRLKLKYMTQVKAR CCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHCCC PPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHYRGSDNPFESKAKKRR CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCC >Mature Secondary Structure SFTVAIVGRPNVGKSTLFNRLVGKKLALVDDTPGVTRDRRPGDAKLIDLRFTIIDTAGL CEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCC EQSGPETLQGRMWAQTEAAIDEADVTLFVIDAKAGLTPADETLGEMLRRRGKPVVLVANK CCCCCHHHCCCCEEHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECC SEARGSDAGFYDAFTLGLGEPCPVSAEHGQGMIDLRDAIVEAIGEDMAFPPDVDEAETDI CCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCE VLPRTEPGSEEEEDEEPVYDETKPLRVAIIGRPNAGKSTLINRFLGEDRLLTGPEAGITR EEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCCC DSISVEWDWRGRTIKMFDTAGMRRKAKVTEKLEKLSVADSLRSIRFAETVVIVFDSTIPF CCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCC EKQDLQLVDLVIREGRAAVLAFNKWDLVEDPQAYLADLREKTERLLPQARGIRAVPMSGQ CCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCC TGYGLDRLMQSIIDTDKTWNRRISTAKLNRWLDAQTTQHPPPAVSGRRLKLKYMTQVKAR CCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHCCC PPAFMISCTRPEAIPESYTRYLVNGLRKDFDMPGVPIRVHYRGSDNPFESKAKKRR CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194