Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185110

Identifier: 159185110

GI number: 159185110

Start: 2202048

End: 2202761

Strand: Direct

Name: 159185110

Synonym: Atu2229

Alternate gene names: NA

Gene position: 2202048-2202761 (Clockwise)

Preceding gene: 15889504

Following gene: 159185111

Centisome position: 77.49

GC content: 58.68

Gene sequence:

>714_bases
ATGGGATTGATCCGCTTTTGTCTGCTCTTTCTTGCTCTCGCCACACCAGTCAACGCGGCGAAGCTCTTCCTGACGACCGA
GGTCTATCCGCCTTATAATCTGCAGGCCAGTGACGGCAGCGTGCACGGCGTCTATTTCGACCAGCTCAAGATCGTGCTCC
AGGACACCGATACGGATTACGAAGTCGCCGTCATGCCCTGGGCGCGGGCCATTGCACTGGCCACAACACAGGCCATGCAC
TGCGTCTTCGCCACGGCACGAACGCCCGAGCGGGAAAAGCTCTTCAAATGGGTTGCGCCAATCCATACCGACCGCAACAT
TCTCGTGGCCCGCCGCGAGGCGAATATCGAGGCTTCCAGCCTCGAGGACGCCAGAAGATACCGGGTGGGAACCCAGCGGG
GCGACTATACCGAAGCACTGTTGGAAAAACTCGGTTTCCCGCAGGTGGATGTCGGCGCGGATTTCGAGATCACGCTCAAC
AAGCTGAAACTCGGGCGCATCGACCTCATGCCCATGTCGGAAAGCACCCTCAAGAGCCTGCCTGCGAACAGTTTCAAGGA
GGTGATAACGCTGAGCCGGCAACAGCTCGGCCTCGCCTGCAACAAAACCGTTCCTGACCAGATCATCGCGAAATTGCAGG
CCCGGCTGGACAAGCTGATCGCCGATGGAACGCAGCAGCAGATATTCGATCGTTACAGTCTGGTCAGCCCCTGA

Upstream 100 bases:

>100_bases
CGCGCCCGCAGCCGGTCCAAAGGCTGATCGCCGCGTTCGATGCGACGTCCGGACAAAGCCGCTTTGCGGCGCGACAAGCG
TGAAGCCGATGGAGGCAGCG

Downstream 100 bases:

>100_bases
GCAATCGGCCGATCCGCCCGCGAACCCATAAAAAGATTGACATCAGGCACTTTTCGGGGTGGTGACAACAGCATCATCAG
GCAAAACGCGGACATGCCCC

Product: ABC transporter, substrate binding protein (amino acid)

Products: NA

Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction Systems; ABC-Type Amino Acid Transporter; Periplasmic Protein; Amino Acid ABC Transporter; ABC Amino Acid Transporter Periplasmic Protein; Cache Sensor Protein

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MGLIRFCLLFLALATPVNAAKLFLTTEVYPPYNLQASDGSVHGVYFDQLKIVLQDTDTDYEVAVMPWARAIALATTQAMH
CVFATARTPEREKLFKWVAPIHTDRNILVARREANIEASSLEDARRYRVGTQRGDYTEALLEKLGFPQVDVGADFEITLN
KLKLGRIDLMPMSESTLKSLPANSFKEVITLSRQQLGLACNKTVPDQIIAKLQARLDKLIADGTQQQIFDRYSLVSP

Sequences:

>Translated_237_residues
MGLIRFCLLFLALATPVNAAKLFLTTEVYPPYNLQASDGSVHGVYFDQLKIVLQDTDTDYEVAVMPWARAIALATTQAMH
CVFATARTPEREKLFKWVAPIHTDRNILVARREANIEASSLEDARRYRVGTQRGDYTEALLEKLGFPQVDVGADFEITLN
KLKLGRIDLMPMSESTLKSLPANSFKEVITLSRQQLGLACNKTVPDQIIAKLQARLDKLIADGTQQQIFDRYSLVSP
>Mature_236_residues
GLIRFCLLFLALATPVNAAKLFLTTEVYPPYNLQASDGSVHGVYFDQLKIVLQDTDTDYEVAVMPWARAIALATTQAMHC
VFATARTPEREKLFKWVAPIHTDRNILVARREANIEASSLEDARRYRVGTQRGDYTEALLEKLGFPQVDVGADFEITLNK
LKLGRIDLMPMSESTLKSLPANSFKEVITLSRQQLGLACNKTVPDQIIAKLQARLDKLIADGTQQQIFDRYSLVSP

Specific function: Unknown

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26547; Mature: 26416

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIRFCLLFLALATPVNAAKLFLTTEVYPPYNLQASDGSVHGVYFDQLKIVLQDTDTDY
CCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCCEEEEEHHHEEEEEECCCCCE
EVAVMPWARAIALATTQAMHCVFATARTPEREKLFKWVAPIHTDRNILVARREANIEASS
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHH
LEDARRYRVGTQRGDYTEALLEKLGFPQVDVGADFEITLNKLKLGRIDLMPMSESTLKSL
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECEEEEEECCHHHHHHC
PANSFKEVITLSRQQLGLACNKTVPDQIIAKLQARLDKLIADGTQQQIFDRYSLVSP
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
GLIRFCLLFLALATPVNAAKLFLTTEVYPPYNLQASDGSVHGVYFDQLKIVLQDTDTDY
CHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCCEEEEEHHHEEEEEECCCCCE
EVAVMPWARAIALATTQAMHCVFATARTPEREKLFKWVAPIHTDRNILVARREANIEASS
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHH
LEDARRYRVGTQRGDYTEALLEKLGFPQVDVGADFEITLNKLKLGRIDLMPMSESTLKSL
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEECEEEEEECCHHHHHHC
PANSFKEVITLSRQQLGLACNKTVPDQIIAKLQARLDKLIADGTQQQIFDRYSLVSP
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA