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The map label for this gene is ybzH [H]

Identifier: 159185093

GI number: 159185093

Start: 2163657

End: 2163947

Strand: Direct

Name: ybzH [H]

Synonym: Atu2187

Alternate gene names: 159185093

Gene position: 2163657-2163947 (Clockwise)

Preceding gene: 15889466

Following gene: 15889468

Centisome position: 76.14

GC content: 54.64

Gene sequence:

>291_bases
ATGAACCCGGAGGAAGTCCTCAAAGCCCTTTCACACCCGGCAAGGCTGAAATTTCTGGAATGGCTGAAAAACCCTGAAAG
TCATTTCTGCCAGGAGCACCCGCTCAGCATGGGTGTGTGCGCCAACCAGTTTCAGATCAGCGGCCTGTCGCAATCCACCG
TATCGTCGCATCTGGCGGTGTTGCAGGCAGCCGGCCTCATCCGGTCGAAAAAGGTCGGGCAATGGGTGTTTTTCGAACGC
AACGAAGAAACCATCGATGCCTTCCGCCATTATCTGCAAGCCAATCTCTGA

Upstream 100 bases:

>100_bases
AGCCGCCTGCCCGCTTGCCACGATGCTCACAGAGACGTGACTTGTATATCGACAATTTCCGATATACATATCGGTCATGT
CAGATATTAAAGAAGCACAG

Downstream 100 bases:

>100_bases
GCCTCCCAAGCTTTGAGCCCCGGGGTGCTGGACTGGAAACCACAGCGGTTTTCGTTCCGGCACCCGAAAAACAAAGCGCG
CCTGCCGCGCAATTACGCCA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNPEEVLKALSHPARLKFLEWLKNPESHFCQEHPLSMGVCANQFQISGLSQSTVSSHLAVLQAAGLIRSKKVGQWVFFER
NEETIDAFRHYLQANL

Sequences:

>Translated_96_residues
MNPEEVLKALSHPARLKFLEWLKNPESHFCQEHPLSMGVCANQFQISGLSQSTVSSHLAVLQAAGLIRSKKVGQWVFFER
NEETIDAFRHYLQANL
>Mature_96_residues
MNPEEVLKALSHPARLKFLEWLKNPESHFCQEHPLSMGVCANQFQISGLSQSTVSSHLAVLQAAGLIRSKKVGQWVFFER
NEETIDAFRHYLQANL

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 10936; Mature: 10936

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPEEVLKALSHPARLKFLEWLKNPESHFCQEHPLSMGVCANQFQISGLSQSTVSSHLAV
CCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHH
LQAAGLIRSKKVGQWVFFERNEETIDAFRHYLQANL
HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPEEVLKALSHPARLKFLEWLKNPESHFCQEHPLSMGVCANQFQISGLSQSTVSSHLAV
CCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHH
LQAAGLIRSKKVGQWVFFERNEETIDAFRHYLQANL
HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]