Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is nemA [H]
Identifier: 15889468
GI number: 15889468
Start: 2164070
End: 2165182
Strand: Direct
Name: nemA [H]
Synonym: Atu2188
Alternate gene names: 15889468
Gene position: 2164070-2165182 (Clockwise)
Preceding gene: 159185093
Following gene: 15889471
Centisome position: 76.16
GC content: 61.28
Gene sequence:
>1113_bases ATGACCAGTCTTTTCGAACCGGCACAGGCCGGCGATATCGCACTCGCCAACCGTATCGTCATGGCTCCCCTCACCCGCAA CCGTTCGCCGGGGGCAATTCCCAACAATCTCAACGCCACCTATTACGAGCAGCGCGCCACGGCTGGGCTGATCGTCACCG AAGGTACGCCGATTTCCCAGCAGGGTCAGGGTTACGCTGACGTTCCGGGCCTCTACAAGCAGGAAGCGATCGAGGGCTGG AAAAAGATCACCGACGGCGTGCACTCGGCCGGCGGCAAGATCGTTGCGCAGATCTGGCATGTGGGCCGCATTTCCCATAC TTCGCTGCAGCCGCATGGCGGCCAGCCGGTCGCACCATCAGCCATTCCTGCCAAGTCGAAGACCTATATCATCAATGATG ACGGCACCGGCGCCTTTGCCGAGACCTCCGAGCCCCGCGCGCTCACCATCGACGATATCGGCCTCATCCTCGAGGATTAT CGTAGCGGTGCACGCGCAGCCCTGGAGGCCGGTTTCGACGGCGTCGAAATCCATGCCGCCAACGGTTACCTGATCGAGCA GTTCCTGAAATCCAGCACCAACCAGCGCACGGATGATTACGGCGGCTCGATCGAAAACCGCGCCCGCTTCCTGCTGGAAG TTGTCGACGCGGTTGCGGAAGAGATCGGCGCGGGCCGCACCGGCATCCGCCTCTCCCCCGTCACCCCGGCCAACGATATT TTCGAGGCCGATCCGCAGCCGCTTTATAATTACGTGGTGGAAGAACTCGGCAAGCGCAATCTCGCCTTCATCCATGTGGT CGAAGGCGCAACGGGCGGACCGCGTGATTTCAAACAGGGCGACAAGCCGTTCGATTACGCGACCTTCAAGGGCGCCTATC GCAATGCAGGCGGCAAGGGCCTGTGGATTGCCAATAATGGTTACGACCGCGAGAGCGCCATCGAAGCCGTGGAAAGCGGC AAAGTCGATGCCGTCGCCTTCGGCAAGGCCTTCATCGCCAATCCGGATCTGGTGCGTCGCCTCAAAGACAACGCGCCCTT GAACGAACCGAACCAGCCGACCTTCTATGGCGGCGGAGCCGAAGGTTATACCGACTATCCGGCACTCGGCTGA
Upstream 100 bases:
>100_bases GGGTGCTGGACTGGAAACCACAGCGGTTTTCGTTCCGGCACCCGAAAAACAAAGCGCGCCTGCCGCGCAATTACGCCAAC CGACCAGAAAGTGAAGTCGC
Downstream 100 bases:
>100_bases TAAACTGAAACGCCGCACCGCCCTTTGGCTGTGCGGCATTTTTCTTTCAGCGCGGGCCTCTCGCCTGCCGCGCGGCAAAA TCTGAAAACGCACCCATGAT
Product: oxidoreductase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTSLFEPAQAGDIALANRIVMAPLTRNRSPGAIPNNLNATYYEQRATAGLIVTEGTPISQQGQGYADVPGLYKQEAIEGW KKITDGVHSAGGKIVAQIWHVGRISHTSLQPHGGQPVAPSAIPAKSKTYIINDDGTGAFAETSEPRALTIDDIGLILEDY RSGARAALEAGFDGVEIHAANGYLIEQFLKSSTNQRTDDYGGSIENRARFLLEVVDAVAEEIGAGRTGIRLSPVTPANDI FEADPQPLYNYVVEELGKRNLAFIHVVEGATGGPRDFKQGDKPFDYATFKGAYRNAGGKGLWIANNGYDRESAIEAVESG KVDAVAFGKAFIANPDLVRRLKDNAPLNEPNQPTFYGGGAEGYTDYPALG
Sequences:
>Translated_370_residues MTSLFEPAQAGDIALANRIVMAPLTRNRSPGAIPNNLNATYYEQRATAGLIVTEGTPISQQGQGYADVPGLYKQEAIEGW KKITDGVHSAGGKIVAQIWHVGRISHTSLQPHGGQPVAPSAIPAKSKTYIINDDGTGAFAETSEPRALTIDDIGLILEDY RSGARAALEAGFDGVEIHAANGYLIEQFLKSSTNQRTDDYGGSIENRARFLLEVVDAVAEEIGAGRTGIRLSPVTPANDI FEADPQPLYNYVVEELGKRNLAFIHVVEGATGGPRDFKQGDKPFDYATFKGAYRNAGGKGLWIANNGYDRESAIEAVESG KVDAVAFGKAFIANPDLVRRLKDNAPLNEPNQPTFYGGGAEGYTDYPALG >Mature_369_residues TSLFEPAQAGDIALANRIVMAPLTRNRSPGAIPNNLNATYYEQRATAGLIVTEGTPISQQGQGYADVPGLYKQEAIEGWK KITDGVHSAGGKIVAQIWHVGRISHTSLQPHGGQPVAPSAIPAKSKTYIINDDGTGAFAETSEPRALTIDDIGLILEDYR SGARAALEAGFDGVEIHAANGYLIEQFLKSSTNQRTDDYGGSIENRARFLLEVVDAVAEEIGAGRTGIRLSPVTPANDIF EADPQPLYNYVVEELGKRNLAFIHVVEGATGGPRDFKQGDKPFDYATFKGAYRNAGGKGLWIANNGYDRESAIEAVESGK VDAVAFGKAFIANPDLVRRLKDNAPLNEPNQPTFYGGGAEGYTDYPALG
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=369, Percent_Identity=49.8644986449864, Blast_Score=334, Evalue=5e-93, Organism=Escherichia coli, GI1789463, Length=223, Percent_Identity=36.322869955157, Blast_Score=117, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17559802, Length=277, Percent_Identity=28.8808664259928, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17559804, Length=277, Percent_Identity=28.8808664259928, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17565138, Length=359, Percent_Identity=27.5766016713092, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI72001454, Length=200, Percent_Identity=30.5, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17564188, Length=272, Percent_Identity=26.1029411764706, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17540738, Length=137, Percent_Identity=36.4963503649635, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17566914, Length=180, Percent_Identity=30, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6325086, Length=385, Percent_Identity=40.7792207792208, Blast_Score=243, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6321973, Length=385, Percent_Identity=38.4415584415584, Blast_Score=222, Evalue=6e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39584; Mature: 39453
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLFEPAQAGDIALANRIVMAPLTRNRSPGAIPNNLNATYYEQRATAGLIVTEGTPISQ CCCCCCCCCCCCCHHHCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCC QGQGYADVPGLYKQEAIEGWKKITDGVHSAGGKIVAQIWHVGRISHTSLQPHGGQPVAPS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC AIPAKSKTYIINDDGTGAFAETSEPRALTIDDIGLILEDYRSGARAALEAGFDGVEIHAA CCCCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEC NGYLIEQFLKSSTNQRTDDYGGSIENRARFLLEVVDAVAEEIGAGRTGIRLSPVTPANDI CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHH FEADPQPLYNYVVEELGKRNLAFIHVVEGATGGPRDFKQGDKPFDYATFKGAYRNAGGKG HCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHCCCCCCCHHHHCHHHHCCCCCE LWIANNGYDRESAIEAVESGKVDAVAFGKAFIANPDLVRRLKDNAPLNEPNQPTFYGGGA EEEECCCCCHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHCCCCCCCCCCEEECCCC EGYTDYPALG CCCCCCCCCC >Mature Secondary Structure TSLFEPAQAGDIALANRIVMAPLTRNRSPGAIPNNLNATYYEQRATAGLIVTEGTPISQ CCCCCCCCCCCCHHHCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCC QGQGYADVPGLYKQEAIEGWKKITDGVHSAGGKIVAQIWHVGRISHTSLQPHGGQPVAPS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC AIPAKSKTYIINDDGTGAFAETSEPRALTIDDIGLILEDYRSGARAALEAGFDGVEIHAA CCCCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEC NGYLIEQFLKSSTNQRTDDYGGSIENRARFLLEVVDAVAEEIGAGRTGIRLSPVTPANDI CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHH FEADPQPLYNYVVEELGKRNLAFIHVVEGATGGPRDFKQGDKPFDYATFKGAYRNAGGKG HCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHCCCCCCCHHHHCHHHHCCCCCE LWIANNGYDRESAIEAVESGKVDAVAFGKAFIANPDLVRRLKDNAPLNEPNQPTFYGGGA EEEECCCCCHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHCCCCCCCCCCEEECCCC EGYTDYPALG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]