Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184946
Identifier: 159184946
GI number: 159184946
Start: 1832217
End: 1832450
Strand: Direct
Name: 159184946
Synonym: Atu1851
Alternate gene names: NA
Gene position: 1832217-1832450 (Clockwise)
Preceding gene: 159184945
Following gene: 15889154
Centisome position: 64.48
GC content: 59.83
Gene sequence:
>234_bases ATGCCCATGAAACCCGGCGACATTGAAGACATGATTAAGGCGGGAATTCCCGGGGCAAAGGTCACGATCCGCGATCTGGC CGGTGATGGCGACCATTACGCGGCGGAGGTCGTTGCGGAAGCATTCAAGGGCAAGACCCGCGTGCAGCAGCACCAGATGG TCTATGATGCGCTGAAGGGCAATATGGGCGGCGTTCTGCACGCCCTTGCCCTGCAGACCTCTGCTCCCGAATGA
Upstream 100 bases:
>100_bases GTCGAGATTAAAGAATTGCACTTGGCCTATGAATCGTGGTTCCCTCAGTTCATGGACGGCGAAACTTTGATTGCCGCAGA ATGAATTAAGGAGAAACACC
Downstream 100 bases:
>100_bases TTGTGGCCGTGAACGTGCCGGCAAAACAGCTTCACTGTCCCGCCGACGCATAAAGGCCCCGGACTAAATCAAAGGCCCGC GTGATGCTCTCACGCGGGCC
Product: BolA/YrbA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPMKPGDIEDMIKAGIPGAKVTIRDLAGDGDHYAAEVVAEAFKGKTRVQQHQMVYDALKGNMGGVLHALALQTSAPE
Sequences:
>Translated_77_residues MPMKPGDIEDMIKAGIPGAKVTIRDLAGDGDHYAAEVVAEAFKGKTRVQQHQMVYDALKGNMGGVLHALALQTSAPE >Mature_76_residues PMKPGDIEDMIKAGIPGAKVTIRDLAGDGDHYAAEVVAEAFKGKTRVQQHQMVYDALKGNMGGVLHALALQTSAPE
Specific function: Unknown
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 8162; Mature: 8030
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKPGDIEDMIKAGIPGAKVTIRDLAGDGDHYAAEVVAEAFKGKTRVQQHQMVYDALKG CCCCCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC NMGGVLHALALQTSAPE CCCHHHHHHHHHCCCCC >Mature Secondary Structure PMKPGDIEDMIKAGIPGAKVTIRDLAGDGDHYAAEVVAEAFKGKTRVQQHQMVYDALKG CCCCCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC NMGGVLHALALQTSAPE CCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]